RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 FOXD2O60548 495 aaPredicted RBP16.08■□□□□ 0.16
SS18L1-202ENST00000370848 CILPO75339 1184 aa16.08■□□□□ 0.16
SS18L1-202ENST00000370848 CCDC192P0DO97 292 aa16.08■□□□□ 0.16
SS18L1-202ENST00000370848 MAGEA11P43364 429 aa16.08■□□□□ 0.16
SS18L1-202ENST00000370848 ATXN1P54253 815 aaKnown RBP16.08■□□□□ 0.16
SS18L1-202ENST00000370848 RPL10AP62906 217 aaKnown RBP16.08■□□□□ 0.16
SS18L1-202ENST00000370848 DMWDQ09019 674 aa16.08■□□□□ 0.16
SS18L1-202ENST00000370848 RUNX3Q13761 415 aa16.08■□□□□ 0.16
SS18L1-202ENST00000370848 MAPRE1Q15691 268 aaKnown RBP16.08■□□□□ 0.16
SS18L1-202ENST00000370848 ZNF394Q53GI3 561 aa16.08■□□□□ 0.16
SS18L1-202ENST00000370848 FAM35AQ86V20 835 aa16.08■□□□□ 0.16
SS18L1-202ENST00000370848 GPIHBP1Q8IV16 184 aa16.08■□□□□ 0.16
SS18L1-202ENST00000370848 KIAA1958Q8N8K9 716 aa16.08■□□□□ 0.16
SS18L1-202ENST00000370848 C12orf29Q8N999 325 aa16.08■□□□□ 0.16
SS18L1-202ENST00000370848 LMO3Q8TAP4 145 aa16.08■□□□□ 0.16
SS18L1-202ENST00000370848 KAT5Q92993 513 aa16.08■□□□□ 0.16
SS18L1-202ENST00000370848 CYP3A43Q9HB55 503 aa16.08■□□□□ 0.16
SS18L1-202ENST00000370848 C2orf42Q9NWW7 574 aa16.08■□□□□ 0.16
SS18L1-202ENST00000370848 CCL26Q9Y258 94 aa16.08■□□□□ 0.16
SS18L1-202ENST00000370848 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.08■□□□□ 0.16
SS18L1-202ENST00000370848 EPG5Q9HCE0 2579 aa16.08■□□□□ 0.16
SS18L1-202ENST00000370848 OTOL1A6NHN0 477 aaPredicted RBP16.07■□□□□ 0.16
SS18L1-202ENST00000370848 F8VP50 259 aa16.07■□□□□ 0.16
SS18L1-202ENST00000370848 FGFR1OPO95684 399 aaKnown RBP16.07■□□□□ 0.16
SS18L1-202ENST00000370848 AFPP02771 609 aaKnown RBP16.07■□□□□ 0.16
SS18L1-202ENST00000370848 ERCC5P28715 1186 aaPredicted RBP16.07■□□□□ 0.16
SS18L1-202ENST00000370848 AVPR1AP37288 418 aa16.07■□□□□ 0.16
SS18L1-202ENST00000370848 GRIK1P39086 918 aa16.07■□□□□ 0.16
SS18L1-202ENST00000370848 USP46P62068 366 aa16.07■□□□□ 0.16
SS18L1-202ENST00000370848 USP4Q13107 963 aa16.07■□□□□ 0.16
SS18L1-202ENST00000370848 PON2Q15165 354 aa16.07■□□□□ 0.16
SS18L1-202ENST00000370848 TAF12Q16514 161 aa16.07■□□□□ 0.16
SS18L1-202ENST00000370848 TPD52L1Q16890 204 aaPredicted RBP16.07■□□□□ 0.16
SS18L1-202ENST00000370848 CAVIN1Q6NZI2 390 aaKnown RBP16.07■□□□□ 0.16
SS18L1-202ENST00000370848 UNC93AQ86WB7 457 aa16.07■□□□□ 0.16
SS18L1-202ENST00000370848 FUKQ8N0W3 1084 aa16.07■□□□□ 0.16
SS18L1-202ENST00000370848 CRYBG2Q8N1P7 616 aa16.07■□□□□ 0.16
SS18L1-202ENST00000370848 TNIP3Q96KP6 325 aa16.07■□□□□ 0.16
SS18L1-202ENST00000370848 MED10Q9BTT4 135 aa16.07■□□□□ 0.16
SS18L1-202ENST00000370848 GKN1Q9NS71 199 aa16.07■□□□□ 0.16
SS18L1-202ENST00000370848 CISHQ9NSE2 258 aa16.07■□□□□ 0.16
SS18L1-202ENST00000370848 DACH1Q9UI36 760 aa16.07■□□□□ 0.16
SS18L1-202ENST00000370848 RAB23Q9ULC3 237 aa16.07■□□□□ 0.16
SS18L1-202ENST00000370848 ZNF638Q14966 1978 aaKnown RBP16.07■□□□□ 0.16
SS18L1-202ENST00000370848 EML5Q05BV3 1969 aa16.06■□□□□ 0.16
SS18L1-202ENST00000370848 MYO16Q9Y6X6 1858 aa16.06■□□□□ 0.16
SS18L1-202ENST00000370848 PMM2O15305 246 aa16.06■□□□□ 0.16
SS18L1-202ENST00000370848 PFKLP17858 780 aa16.06■□□□□ 0.16
SS18L1-202ENST00000370848 ADORA2BP29275 332 aa16.06■□□□□ 0.16
SS18L1-202ENST00000370848 FNTBP49356 437 aa16.06■□□□□ 0.16
SS18L1-202ENST00000370848 CUL2Q13617 745 aa16.06■□□□□ 0.16
SS18L1-202ENST00000370848 PDGFRLQ15198 375 aa16.06■□□□□ 0.16
SS18L1-202ENST00000370848 ZNF77Q15935 545 aa16.06■□□□□ 0.16
SS18L1-202ENST00000370848 CSRP2Q16527 193 aa16.06■□□□□ 0.16
SS18L1-202ENST00000370848 FSTL4Q6MZW2 842 aa16.06■□□□□ 0.16
SS18L1-202ENST00000370848 VSTM1Q6UX27 236 aa16.06■□□□□ 0.16
SS18L1-202ENST00000370848 ARHGEF19Q8IW93 802 aa16.06■□□□□ 0.16
SS18L1-202ENST00000370848 MAB21L3Q8N8X9 362 aa16.06■□□□□ 0.16
SS18L1-202ENST00000370848 SLC2A14Q8TDB8 520 aa16.06■□□□□ 0.16
SS18L1-202ENST00000370848 NETO1Q8TDF5 533 aa16.06■□□□□ 0.16
SS18L1-202ENST00000370848 MRPS31Q92665 395 aaKnown RBP16.06■□□□□ 0.16
SS18L1-202ENST00000370848 SPATA17Q96L03 361 aa16.06■□□□□ 0.16
SS18L1-202ENST00000370848 KCNK16Q96T55 309 aa16.06■□□□□ 0.16
SS18L1-202ENST00000370848 NT5C1AQ9BXI3 368 aa16.06■□□□□ 0.16
SS18L1-202ENST00000370848 SMG9Q9H0W8 520 aaKnown RBP16.06■□□□□ 0.16
SS18L1-202ENST00000370848 KRT82Q9NSB4 513 aa16.06■□□□□ 0.16
SS18L1-202ENST00000370848 SAMSN1Q9NSI8 373 aaKnown RBP16.06■□□□□ 0.16
SS18L1-202ENST00000370848 GCNT4Q9P109 453 aa16.06■□□□□ 0.16
SS18L1-202ENST00000370848 LAMA1P25391 3075 aa16.05■□□□□ 0.16
SS18L1-202ENST00000370848 SPAG17Q6Q759 2223 aa16.05■□□□□ 0.16
SS18L1-202ENST00000370848 SLC30A4O14863 429 aa16.05■□□□□ 0.16
SS18L1-202ENST00000370848 BEST1O76090 585 aa16.05■□□□□ 0.16
SS18L1-202ENST00000370848 MTIF2P46199 727 aaKnown RBP16.05■□□□□ 0.16
SS18L1-202ENST00000370848 APBA1Q02410 837 aa16.05■□□□□ 0.16
SS18L1-202ENST00000370848 SIM2Q14190 667 aaPredicted RBP16.05■□□□□ 0.16
SS18L1-202ENST00000370848 TXNDC8Q6A555 127 aa16.05■□□□□ 0.16
SS18L1-202ENST00000370848 SASS6Q6UVJ0 657 aa16.05■□□□□ 0.16
SS18L1-202ENST00000370848 UBR7Q8N806 425 aa16.05■□□□□ 0.16
SS18L1-202ENST00000370848 ZMIZ2Q8NF64 920 aa16.05■□□□□ 0.16
SS18L1-202ENST00000370848 LOXL4Q96JB6 756 aa16.05■□□□□ 0.16
SS18L1-202ENST00000370848 SMOQ99835 787 aa16.05■□□□□ 0.16
SS18L1-202ENST00000370848 CRACR2AQ9BSW2 395 aa16.05■□□□□ 0.16
SS18L1-202ENST00000370848 TTLL2Q9BWV7 592 aa16.05■□□□□ 0.16
SS18L1-202ENST00000370848 INTS2Q9H0H0 1204 aaKnown RBP16.05■□□□□ 0.16
SS18L1-202ENST00000370848 THAP9Q9H5L6 903 aa16.05■□□□□ 0.16
SS18L1-202ENST00000370848 CDV3Q9UKY7 258 aaKnown RBP16.05■□□□□ 0.16
SS18L1-202ENST00000370848 ACACBO00763 2458 aa16.04■□□□□ 0.16
SS18L1-202ENST00000370848 SPTBN2O15020 2390 aa16.04■□□□□ 0.16
SS18L1-202ENST00000370848 TRIM66O15016 1216 aa16.04■□□□□ 0.16
SS18L1-202ENST00000370848 P4HA2O15460 535 aa16.04■□□□□ 0.16
SS18L1-202ENST00000370848 ATG13O75143 517 aa16.04■□□□□ 0.16
SS18L1-202ENST00000370848 AP1G2O75843 785 aa16.04■□□□□ 0.16
SS18L1-202ENST00000370848 DRD1P21728 446 aa16.04■□□□□ 0.16
SS18L1-202ENST00000370848 ANXA13P27216 316 aa16.04■□□□□ 0.16
SS18L1-202ENST00000370848 RAD23BP54727 409 aa16.04■□□□□ 0.16
SS18L1-202ENST00000370848 AMPD2Q01433 879 aa16.04■□□□□ 0.16
SS18L1-202ENST00000370848 IFRD2Q12894 506 aaPredicted RBP16.04■□□□□ 0.16
SS18L1-202ENST00000370848 MTF1Q14872 753 aa16.04■□□□□ 0.16
SS18L1-202ENST00000370848 STX1AQ16623 288 aa16.04■□□□□ 0.16
SS18L1-202ENST00000370848 FBXO43Q4G163 708 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms