RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 MAN1C1Q9NR34 630 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 PLSCR4Q9NRQ2 329 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 SAMSN1Q9NSI8 373 aaKnown RBP5.31□□□□□ -1.56
UBE3D-202ENST00000369746 MOCS1Q9NZB8 636 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 CLEC4AQ9UMR7 237 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 PCDHGB4Q9UN71 923 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 FAM32AQ9Y421 112 aaKnown RBP5.31□□□□□ -1.56
UBE3D-202ENST00000369746 PCDHGA2Q9Y5H1 932 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 A0A1B0GVG6 124 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 C16orf96A6NNT2 1141 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 HNRNPCL2B2RXH8 293 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 C5orf67F2Z3F1 127 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 SPECC1L-ADORA2AF8WAN1 911 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 HNRNPCL1O60812 293 aaKnown RBP5.3□□□□□ -1.56
UBE3D-202ENST00000369746 KERAO60938 352 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 CBFA2T3O75081 653 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 MAFO75444 373 aaPredicted RBP5.3□□□□□ -1.56
UBE3D-202ENST00000369746 CLTAP09496 248 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 KELP23276 732 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 SP100P23497 879 aaPredicted RBP5.3□□□□□ -1.56
UBE3D-202ENST00000369746 PLCD1P51178 756 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 BLVRAP53004 296 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 CENPCQ03188 943 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 TLE2Q04725 743 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 RFTN1Q14699 578 aaPredicted RBP5.3□□□□□ -1.56
UBE3D-202ENST00000369746 PTGISQ16647 500 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 GSTA3Q16772 222 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 ZNF423Q2M1K9 1284 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 CEP55Q53EZ4 464 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 TMEM67Q5HYA8 995 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 OR52E8Q6IFG1 317 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 JMJD6Q6NYC1 403 aaPredicted RBP5.3□□□□□ -1.56
UBE3D-202ENST00000369746 NLRC3Q7RTR2 1065 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 CABP7Q86V35 215 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 GALNT12Q8IXK2 581 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 FAM126BQ8IXS8 530 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 REXO1Q8N1G1 1221 aaKnown RBP5.3□□□□□ -1.56
UBE3D-202ENST00000369746 FBXO15Q8NCQ5 510 aaPredicted RBP5.3□□□□□ -1.56
UBE3D-202ENST00000369746 LINS1Q8NG48 757 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 TRIM63Q969Q1 353 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 RRP36Q96EU6 259 aaKnown RBP5.3□□□□□ -1.56
UBE3D-202ENST00000369746 BTBD6Q96KE9 485 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 SLC2A13Q96QE2 648 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 RHBGQ9H310 441 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 NCOR1P1Q9H4R4 102 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 TDRD3Q9H7E2 651 aaKnown RBP5.3□□□□□ -1.56
UBE3D-202ENST00000369746 TIMMDC1Q9NPL8 285 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 SEC31BQ9NQW1 1179 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 TRMT13Q9NUP7 481 aaKnown RBP5.3□□□□□ -1.56
UBE3D-202ENST00000369746 ITIH6Q6UXX5 1313 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 PARP14Q460N5 1801 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 VWA3AA6NCI4 1184 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 ENC1O14682 589 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 IKBKBO14920 756 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 ATP2A1O14983 1001 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 KMOO15229 486 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 MICAL2O94851 1124 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 ENDOD1O94919 500 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 PAPLNO95428 1278 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 MT-CO1P00395 513 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 PAEPP09466 180 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 HDCP19113 662 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 CCND3P30281 292 aaPredicted RBP5.3□□□□□ -1.56
UBE3D-202ENST00000369746 CETN2P41208 172 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 MTIF2P46199 727 aaKnown RBP5.3□□□□□ -1.56
UBE3D-202ENST00000369746 CCR3P51677 355 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 ATXN1P54253 815 aaKnown RBP5.3□□□□□ -1.56
UBE3D-202ENST00000369746 COASYQ13057 564 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 ITGA9Q13797 1035 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 MXD4Q14582 209 aaPredicted RBP5.3□□□□□ -1.56
UBE3D-202ENST00000369746 STAT4Q14765 748 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 DCAF17Q5H9S7 520 aaPredicted RBP5.3□□□□□ -1.56
UBE3D-202ENST00000369746 FYB2Q5VWT5 728 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 SLC2A7Q6PXP3 512 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 CROCCP3Q8IVE0 287 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 FAM20CQ8IXL6 584 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 AVL9Q8NBF6 648 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 CEP76Q8TAP6 659 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 DDI1Q8WTU0 396 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 THAP3Q8WTV1 239 aaPredicted RBP5.3□□□□□ -1.56
UBE3D-202ENST00000369746 OSBP2Q969R2 916 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 LENG1Q96BZ8 264 aaPredicted RBP5.3□□□□□ -1.56
UBE3D-202ENST00000369746 MRPL38Q96DV4 380 aaKnown RBP5.3□□□□□ -1.56
UBE3D-202ENST00000369746 CHFRQ96EP1 664 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 ATP6V1G3Q96LB4 118 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 HS6ST2Q96MM7 605 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 CLUHP3Q96NS8 147 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 OLFM3Q96PB7 478 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 WDR12Q9GZL7 423 aaKnown RBP5.3□□□□□ -1.56
UBE3D-202ENST00000369746 SCAND2PQ9GZW5 306 aaPredicted RBP5.3□□□□□ -1.56
UBE3D-202ENST00000369746 ADNPQ9H2P0 1102 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 PRDM12Q9H4Q4 367 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 C12orf10Q9HB07 376 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 FAIMQ9NVQ4 179 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 CRNNQ9UBG3 495 aaPredicted RBP5.3□□□□□ -1.56
UBE3D-202ENST00000369746 RAPGEFL1Q9UHV5 662 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 FBXL21Q9UKT6 434 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 L3MBTL1Q9Y468 752 aa5.3□□□□□ -1.56
UBE3D-202ENST00000369746 ZFP37Q9Y6Q3 630 aaPredicted RBP5.3□□□□□ -1.56
UBE3D-202ENST00000369746 KIAA0100Q14667 2235 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms