RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 KIAA0895Q8NCT3 520 aa17.01■□□□□ 0.31
CKS1B-202ENST00000368436 TSTD1Q8NFU3 115 aa17.01■□□□□ 0.31
CKS1B-202ENST00000368436 PAGE5Q96GU1 130 aa17.01■□□□□ 0.31
CKS1B-202ENST00000368436 TNIP3Q96KP6 325 aa17.01■□□□□ 0.31
CKS1B-202ENST00000368436 PNKPQ96T60 521 aa17.01■□□□□ 0.31
CKS1B-202ENST00000368436 SDCBP2Q9H190 292 aa17.01■□□□□ 0.31
CKS1B-202ENST00000368436 KCTD10Q9H3F6 313 aa17.01■□□□□ 0.31
CKS1B-202ENST00000368436 COMMD8Q9NX08 183 aa17.01■□□□□ 0.31
CKS1B-202ENST00000368436 TBC1D14Q9P2M4 693 aa17.01■□□□□ 0.31
CKS1B-202ENST00000368436 MMP17Q9ULZ9 603 aa17.01■□□□□ 0.31
CKS1B-202ENST00000368436 ABCA7Q8IZY2 2146 aa17■□□□□ 0.31
CKS1B-202ENST00000368436 ATP8B3O60423 1300 aa17■□□□□ 0.31
CKS1B-202ENST00000368436 E2F8A0AVK6 867 aa17■□□□□ 0.31
CKS1B-202ENST00000368436 FAM92AA1XBS5 289 aa17■□□□□ 0.31
CKS1B-202ENST00000368436 SEC13P55735 322 aa17■□□□□ 0.31
CKS1B-202ENST00000368436 DNM1Q05193 864 aaKnown RBP17■□□□□ 0.31
CKS1B-202ENST00000368436 IFRD2Q12894 506 aaPredicted RBP17■□□□□ 0.31
CKS1B-202ENST00000368436 PKP1Q13835 747 aa17■□□□□ 0.31
CKS1B-202ENST00000368436 CRY1Q16526 586 aa17■□□□□ 0.31
CKS1B-202ENST00000368436 STPG1Q5TH74 334 aa17■□□□□ 0.31
CKS1B-202ENST00000368436 C11orf74Q86VG3 221 aa17■□□□□ 0.31
CKS1B-202ENST00000368436 FUKQ8N0W3 1084 aa17■□□□□ 0.31
CKS1B-202ENST00000368436 SCAMP5Q8TAC9 235 aa17■□□□□ 0.31
CKS1B-202ENST00000368436 FBXO32Q969P5 355 aa17■□□□□ 0.31
CKS1B-202ENST00000368436 ZFRQ96KR1 1074 aaKnown RBP17■□□□□ 0.31
CKS1B-202ENST00000368436 CNOT6LQ96LI5 555 aaKnown RBP17■□□□□ 0.31
CKS1B-202ENST00000368436 DUSP9Q99956 384 aaKnown RBP17■□□□□ 0.31
CKS1B-202ENST00000368436 SMOC1Q9H4F8 434 aa17■□□□□ 0.31
CKS1B-202ENST00000368436 DMAP1Q9NPF5 467 aaPredicted RBP17■□□□□ 0.31
CKS1B-202ENST00000368436 CHORDC1Q9UHD1 332 aaPredicted RBP17■□□□□ 0.31
CKS1B-202ENST00000368436 BCLAF3A2AJT9 711 aaKnown RBP16.99■□□□□ 0.31
CKS1B-202ENST00000368436 PDXKO00764 312 aa16.99■□□□□ 0.31
CKS1B-202ENST00000368436 SCAMP3O14828 347 aaKnown RBP16.99■□□□□ 0.31
CKS1B-202ENST00000368436 COCHO43405 550 aa16.99■□□□□ 0.31
CKS1B-202ENST00000368436 ADH1CP00326 375 aa16.99■□□□□ 0.31
CKS1B-202ENST00000368436 ZDHHC11BP0C7U3 371 aa16.99■□□□□ 0.31
CKS1B-202ENST00000368436 TUBP50607 506 aa16.99■□□□□ 0.31
CKS1B-202ENST00000368436 DLG4P78352 724 aa16.99■□□□□ 0.31
CKS1B-202ENST00000368436 MESP2Q0VG99 397 aa16.99■□□□□ 0.31
CKS1B-202ENST00000368436 SGSM1Q2NKQ1 1148 aa16.99■□□□□ 0.31
CKS1B-202ENST00000368436 ZACNQ401N2 412 aa16.99■□□□□ 0.31
CKS1B-202ENST00000368436 KMT5BQ4FZB7 885 aa16.99■□□□□ 0.31
CKS1B-202ENST00000368436 HSF5Q4G112 596 aaPredicted RBP16.99■□□□□ 0.31
CKS1B-202ENST00000368436 USP39Q53GS9 565 aaKnown RBP16.99■□□□□ 0.31
CKS1B-202ENST00000368436 HECTD3Q5T447 861 aa16.99■□□□□ 0.31
CKS1B-202ENST00000368436 HSCBQ8IWL3 235 aa16.99■□□□□ 0.31
CKS1B-202ENST00000368436 CRYBG2Q8N1P7 616 aa16.99■□□□□ 0.31
CKS1B-202ENST00000368436 CCDC33Q8N5R6 958 aa16.99■□□□□ 0.31
CKS1B-202ENST00000368436 ELMO3Q96BJ8 720 aa16.99■□□□□ 0.31
CKS1B-202ENST00000368436 OTUB2Q96DC9 234 aa16.99■□□□□ 0.31
CKS1B-202ENST00000368436 SMARCD1Q96GM5 515 aa16.99■□□□□ 0.31
CKS1B-202ENST00000368436 MED10Q9BTT4 135 aa16.99■□□□□ 0.31
CKS1B-202ENST00000368436 EXOC1Q9NV70 894 aa16.99■□□□□ 0.31
CKS1B-202ENST00000368436 TPRP12270 2363 aaKnown RBP16.99■□□□□ 0.31
CKS1B-202ENST00000368436 PLXND1Q9Y4D7 1925 aa16.98■□□□□ 0.31
CKS1B-202ENST00000368436 KAT7O95251 611 aa16.98■□□□□ 0.31
CKS1B-202ENST00000368436 CAVIN2O95810 425 aa16.98■□□□□ 0.31
CKS1B-202ENST00000368436 RPN1P04843 607 aaKnown RBP16.98■□□□□ 0.31
CKS1B-202ENST00000368436 APODP05090 189 aa16.98■□□□□ 0.31
CKS1B-202ENST00000368436 HSP90AA1P07900 732 aaKnown RBP16.98■□□□□ 0.31
CKS1B-202ENST00000368436 ADH5P11766 374 aa16.98■□□□□ 0.31
CKS1B-202ENST00000368436 HNRNPLP14866 589 aaKnown RBP eCLIP16.98■□□□□ 0.31
CKS1B-202ENST00000368436 SLC5A3P53794 718 aa16.98■□□□□ 0.31
CKS1B-202ENST00000368436 CREB5Q02930 508 aa16.98■□□□□ 0.31
CKS1B-202ENST00000368436 PMS2CLQ68D20 193 aa16.98■□□□□ 0.31
CKS1B-202ENST00000368436 ANO7Q6IWH7 933 aa16.98■□□□□ 0.31
CKS1B-202ENST00000368436 TMEM92Q6UXU6 159 aa16.98■□□□□ 0.31
CKS1B-202ENST00000368436 SCARA5Q6ZMJ2 495 aa16.98■□□□□ 0.31
CKS1B-202ENST00000368436 ACOT1Q86TX2 421 aa16.98■□□□□ 0.31
CKS1B-202ENST00000368436 C12orf40Q86WS4 652 aa16.98■□□□□ 0.31
CKS1B-202ENST00000368436 SFTPA1Q8IWL2 248 aa16.98■□□□□ 0.31
CKS1B-202ENST00000368436 PHTF2Q8N3S3 785 aa16.98■□□□□ 0.31
CKS1B-202ENST00000368436 ZMIZ2Q8NF64 920 aa16.98■□□□□ 0.31
CKS1B-202ENST00000368436 OLIG1Q8TAK6 271 aa16.98■□□□□ 0.31
CKS1B-202ENST00000368436 TMC2Q8TDI7 906 aa16.98■□□□□ 0.31
CKS1B-202ENST00000368436 TAF4BQ92750 862 aa16.98■□□□□ 0.31
CKS1B-202ENST00000368436 SMOQ99835 787 aa16.98■□□□□ 0.31
CKS1B-202ENST00000368436 TPSD1Q9BZJ3 242 aa16.98■□□□□ 0.31
CKS1B-202ENST00000368436 CSNK1G1Q9HCP0 422 aa16.98■□□□□ 0.31
CKS1B-202ENST00000368436 USP25Q9UHP3 1055 aa16.98■□□□□ 0.31
CKS1B-202ENST00000368436 INVSQ9Y283 1065 aa16.98■□□□□ 0.31
CKS1B-202ENST00000368436 ACACBO00763 2458 aa16.98■□□□□ 0.31
CKS1B-202ENST00000368436 TNRC6BQ9UPQ9 1833 aaKnown RBP16.98■□□□□ 0.31
CKS1B-202ENST00000368436 KMT2BQ9UMN6 2715 aaPredicted RBP16.98■□□□□ 0.31
CKS1B-202ENST00000368436 CNOT1A5YKK6 2376 aaKnown RBP16.97■□□□□ 0.31
CKS1B-202ENST00000368436 MYO18AQ92614 2054 aaKnown RBP16.97■□□□□ 0.31
CKS1B-202ENST00000368436 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.97■□□□□ 0.31
CKS1B-202ENST00000368436 IKBKBO14920 756 aa16.97■□□□□ 0.31
CKS1B-202ENST00000368436 AP1G2O75843 785 aa16.97■□□□□ 0.31
CKS1B-202ENST00000368436 ASS1P00966 412 aaKnown RBP16.97■□□□□ 0.31
CKS1B-202ENST00000368436 NR3C1P04150 777 aa16.97■□□□□ 0.31
CKS1B-202ENST00000368436 MYL1P05976 194 aa16.97■□□□□ 0.31
CKS1B-202ENST00000368436 P4HA1P13674 534 aa16.97■□□□□ 0.31
CKS1B-202ENST00000368436 CMA1P23946 247 aa16.97■□□□□ 0.31
CKS1B-202ENST00000368436 GBP1P32455 592 aa16.97■□□□□ 0.31
CKS1B-202ENST00000368436 GRIA2P42262 883 aa16.97■□□□□ 0.31
CKS1B-202ENST00000368436 TNFRSF4P43489 277 aa16.97■□□□□ 0.31
CKS1B-202ENST00000368436 KIR2DL1P43626 348 aaPredicted RBP16.97■□□□□ 0.31
CKS1B-202ENST00000368436 GAD2Q05329 585 aa16.97■□□□□ 0.31
CKS1B-202ENST00000368436 LY6G5CQ5SRR4 150 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms