RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 AP1G2O75843 785 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 SLU7O95391 586 aaKnown RBP9.98□□□□□ -0.81
VTA1-201ENST00000367621 FAM200BP0CF97 657 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 KRT3P12035 628 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 CD46P15529 392 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 TCP1P17987 556 aaKnown RBP9.98□□□□□ -0.81
VTA1-201ENST00000367621 CTNNA1P35221 906 aaKnown RBP9.98□□□□□ -0.81
VTA1-201ENST00000367621 GTF2F1P35269 517 aaKnown RBP eCLIP9.98□□□□□ -0.81
VTA1-201ENST00000367621 SLC1A1P43005 524 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 NDUFV1P49821 464 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 TERF1P54274 439 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 MAP3K7CLP57077 242 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 SLC6A3Q01959 620 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 TAP1Q03518 808 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 RASIP1Q5U651 963 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 DAB2IPQ5VWQ8 1189 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 OR6B2Q6IFH4 312 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 KCNT2Q6UVM3 1135 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 BHLHA9Q7RTU4 235 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 GPRIN1Q7Z2K8 1008 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 SLC39A11Q8N1S5 342 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 RASGEF1CQ8N431 466 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 EMC1Q8N766 993 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 IPO4Q8TEX9 1081 aaKnown RBP9.98□□□□□ -0.81
VTA1-201ENST00000367621 FNIP1Q8TF40 1166 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 UBE2Q2Q8WVN8 375 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 HERVK_113Q902F9 699 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 MS4A14Q96JA4 679 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 MED10Q9BTT4 135 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 ST7Q9NRC1 585 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 METTL5Q9NRN9 209 aaKnown RBP9.98□□□□□ -0.81
VTA1-201ENST00000367621 CHST7Q9NS84 486 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 IP6K2Q9UHH9 426 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 PCDHA3Q9Y5H8 950 aa9.98□□□□□ -0.81
VTA1-201ENST00000367621 SF3B1O75533 1304 aaKnown RBP eCLIP9.98□□□□□ -0.817e-7■■■■■ 119.6
VTA1-201ENST00000367621 OR6C75A6NL08 312 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 MIF4GDA9UHW6 222 aaKnown RBP9.97□□□□□ -0.81
VTA1-201ENST00000367621 KCNK3O14649 394 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 ADAM12O43184 909 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 GJB5O95377 273 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 LCP1P13796 627 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 SYN1P17600 705 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 BDNFP23560 247 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 FLT3P36888 993 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 SCNN1AP37088 669 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 ACADSBP45954 432 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 ALDH7A1P49419 539 aaKnown RBP9.97□□□□□ -0.81
VTA1-201ENST00000367621 DNA2P51530 1060 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 TSPY1Q01534 308 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 ELAVL2Q12926 359 aaKnown RBP9.97□□□□□ -0.81
VTA1-201ENST00000367621 BTG3Q14201 252 aaPredicted RBP9.97□□□□□ -0.81
VTA1-201ENST00000367621 NAA30Q147X3 362 aaPredicted RBP9.97□□□□□ -0.81
VTA1-201ENST00000367621 CCDC14Q49A88 953 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 CTXN3Q4LDR2 81 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 SLC39A12Q504Y0 691 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 RAB6CQ53S08 254 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 FAM102AQ5T9C2 384 aaPredicted RBP9.97□□□□□ -0.81
VTA1-201ENST00000367621 DCUN1D2Q6PH85 259 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 RSRC2Q7L4I2 434 aaKnown RBP9.97□□□□□ -0.81
VTA1-201ENST00000367621 SLC26A9Q7LBE3 791 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 COLGALT1Q8NBJ5 622 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 MSANTD4Q8NCY6 345 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 NDRG1Q92597 394 aaKnown RBP9.97□□□□□ -0.81
VTA1-201ENST00000367621 SMARCD1Q96GM5 515 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 PBKQ96KB5 322 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 CAPZA3Q96KX2 299 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 TTPALQ9BTX7 342 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 C11orf84Q9BUA3 381 aaPredicted RBP9.97□□□□□ -0.81
VTA1-201ENST00000367621 SELENOOQ9BVL4 669 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 MIS12Q9H081 205 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 RAB6CQ9H0N0 254 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 SYNCQ9H7C4 482 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 TTC7AQ9ULT0 858 aaPredicted RBP9.97□□□□□ -0.81
VTA1-201ENST00000367621 LTBP2Q14767 1821 aa9.97□□□□□ -0.81
VTA1-201ENST00000367621 TNFRSF10BO14763 440 aa9.96□□□□□ -0.82
VTA1-201ENST00000367621 SPOPO43791 374 aa9.96□□□□□ -0.82
VTA1-201ENST00000367621 GRAP2O75791 330 aa9.96□□□□□ -0.82
VTA1-201ENST00000367621 FYNP06241 537 aa9.96□□□□□ -0.82
VTA1-201ENST00000367621 PYGMP11217 842 aa9.96□□□□□ -0.82
VTA1-201ENST00000367621 CYP2F1P24903 491 aa9.96□□□□□ -0.82
VTA1-201ENST00000367621 IL1R2P27930 398 aa9.96□□□□□ -0.82
VTA1-201ENST00000367621 ZNF143P52747 638 aaPredicted RBP9.96□□□□□ -0.82
VTA1-201ENST00000367621 MRPS5P82675 430 aaKnown RBP9.96□□□□□ -0.82
VTA1-201ENST00000367621 SLC25A11Q02978 314 aaKnown RBP9.96□□□□□ -0.82
VTA1-201ENST00000367621 ADIGQ0VDE8 80 aa9.96□□□□□ -0.82
VTA1-201ENST00000367621 PIGHQ14442 188 aaPredicted RBP9.96□□□□□ -0.82
VTA1-201ENST00000367621 MAPRE1Q15691 268 aaKnown RBP9.96□□□□□ -0.82
VTA1-201ENST00000367621 CFAP221Q4G0U5 840 aa9.96□□□□□ -0.82
VTA1-201ENST00000367621 ATP13A4Q4VNC1 1196 aa9.96□□□□□ -0.82
VTA1-201ENST00000367621 SH3PXD2AQ5TCZ1 1133 aa9.96□□□□□ -0.82
VTA1-201ENST00000367621 OTUD1Q5VV17 481 aaPredicted RBP9.96□□□□□ -0.82
VTA1-201ENST00000367621 TXNRD3NBQ6F5E7 133 aa9.96□□□□□ -0.82
VTA1-201ENST00000367621 ZNF280DQ6N043 979 aa9.96□□□□□ -0.82
VTA1-201ENST00000367621 AADACL2Q6P093 401 aa9.96□□□□□ -0.82
VTA1-201ENST00000367621 CC2D1AQ6P1N0 951 aaPredicted RBP9.96□□□□□ -0.82
VTA1-201ENST00000367621 PSRC1Q6PGN9 363 aaPredicted RBP9.96□□□□□ -0.82
VTA1-201ENST00000367621 PRSS55Q6UWB4 352 aaPredicted RBP9.96□□□□□ -0.82
VTA1-201ENST00000367621 HFE2Q6ZVN8 426 aa9.96□□□□□ -0.82
VTA1-201ENST00000367621 CYP4V2Q6ZWL3 525 aaPredicted RBP9.96□□□□□ -0.82
VTA1-201ENST00000367621 ARCQ7LC44 396 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms