RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 MROH7Q68CQ1 1323 aa12.02□□□□□ -0.49
SYNE1-204ENST00000367248 SPATA31C2B4DYI2 1134 aa12.02□□□□□ -0.49
SYNE1-204ENST00000367248 GOLGA8RI6L899 631 aa12.02□□□□□ -0.49
SYNE1-204ENST00000367248 ALDH1A2O94788 518 aa12.02□□□□□ -0.49
SYNE1-204ENST00000367248 MYO1DO94832 1006 aa12.02□□□□□ -0.49
SYNE1-204ENST00000367248 ZNF200P98182 395 aaPredicted RBP12.02□□□□□ -0.49
SYNE1-204ENST00000367248 SNCBQ16143 134 aa12.02□□□□□ -0.49
SYNE1-204ENST00000367248 PLPPR4Q7Z2D5 763 aa12.02□□□□□ -0.49
SYNE1-204ENST00000367248 TBC1D19Q8N5T2 526 aa12.02□□□□□ -0.49
SYNE1-204ENST00000367248 FRMD8P1Q9BZ68 369 aaPredicted RBP12.02□□□□□ -0.49
SYNE1-204ENST00000367248 GMNCA6NCL1 334 aa12.02□□□□□ -0.49
SYNE1-204ENST00000367248 MZF1P28698 734 aaPredicted RBP12.02□□□□□ -0.49
SYNE1-204ENST00000367248 CD52P31358 61 aa12.02□□□□□ -0.49
SYNE1-204ENST00000367248 GEMP55040 296 aa12.02□□□□□ -0.49
SYNE1-204ENST00000367248 ANKRD20A4Q4UJ75 823 aa12.02□□□□□ -0.49
SYNE1-204ENST00000367248 ANKRD20A8PQ5CZ79 823 aa12.02□□□□□ -0.49
SYNE1-204ENST00000367248 ANKRD20A2Q5SQ80 823 aa12.02□□□□□ -0.49
SYNE1-204ENST00000367248 ANKRD20A1Q5TYW2 823 aa12.02□□□□□ -0.49
SYNE1-204ENST00000367248 TBCBQ99426 244 aa12.02□□□□□ -0.49
SYNE1-204ENST00000367248 HSD17B14Q9BPX1 270 aa12.02□□□□□ -0.49
SYNE1-204ENST00000367248 NSMCE4AQ9NXX6 385 aa12.02□□□□□ -0.49
SYNE1-204ENST00000367248 TNFSF13BQ9Y275 285 aa12.02□□□□□ -0.49
SYNE1-204ENST00000367248 LBX2Q6XYB7 198 aa12.02□□□□□ -0.49
SYNE1-204ENST00000367248 TFB1MQ8WVM0 346 aaKnown RBP12.02□□□□□ -0.49
SYNE1-204ENST00000367248 STN1Q9H668 368 aaKnown RBP12.02□□□□□ -0.49
SYNE1-204ENST00000367248 PDGFCQ9NRA1 345 aa12.02□□□□□ -0.49
SYNE1-204ENST00000367248 RRP15Q9Y3B9 282 aaKnown RBP12.02□□□□□ -0.49
SYNE1-204ENST00000367248 ZMYM2Q9UBW7 1377 aa12.02□□□□□ -0.49
SYNE1-204ENST00000367248 RHOCP08134 193 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 SOX11P35716 441 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 OXCT1P55809 520 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 C20orf96Q9NUD7 363 aaPredicted RBP12.01□□□□□ -0.49
SYNE1-204ENST00000367248 TRIM33Q9UPN9 1127 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.01□□□□□ -0.49
SYNE1-204ENST00000367248 UMODL1Q5DID0 1318 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 SLIT3O75094 1523 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 TISP43B9A030 160 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 SMIM10L2AP0DMW4 78 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 SMIM10L2BP0DMW5 78 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 SLC12A3P55017 1021 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 TRIM68Q6AZZ1 485 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 LRIG3Q6UXM1 1119 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 ARHGEF19Q8IW93 802 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 ADAM32Q8TC27 787 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 ZNF558Q96NG5 402 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 ISCUQ9H1K1 167 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 ATRNO75882 1429 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 SNHG28P0DPA3 235 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 FDFT1P37268 417 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 CARSP49589 748 aaKnown RBP12.01□□□□□ -0.49
SYNE1-204ENST00000367248 FNDC3BQ53EP0 1204 aaKnown RBP12.01□□□□□ -0.49
SYNE1-204ENST00000367248 FAXCQ5TGI0 409 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 NYAP1Q6ZVC0 841 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 ANKS3Q6ZW76 656 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 TSSK1BQ9BXA7 367 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 UBE2OQ9C0C9 1292 aaKnown RBP12.01□□□□□ -0.49
SYNE1-204ENST00000367248 ZFP69BQ9UJL9 534 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 RECQL4O94761 1208 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 PAEPP09466 180 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 LINC00523Q86TU6 105 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 RSPH1Q8WYR4 309 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 ZNF212Q9UDV6 495 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 FGFR1P11362 822 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 YWHAZP63104 245 aaKnown RBP12.01□□□□□ -0.49
SYNE1-204ENST00000367248 SHROOM1Q2M3G4 852 aaPredicted RBP12.01□□□□□ -0.49
SYNE1-204ENST00000367248 BEND6Q5SZJ8 279 aaPredicted RBP12.01□□□□□ -0.49
SYNE1-204ENST00000367248 ZCCHC17Q9NP64 241 aaKnown RBP12.01□□□□□ -0.49
SYNE1-204ENST00000367248 FAM237AA0A1B0GTK4 181 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 GTF2BQ00403 316 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 LONRF1Q17RB8 773 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 KIAA1324Q6UXG2 1013 aaKnown RBP12.01□□□□□ -0.49
SYNE1-204ENST00000367248 C4orf33Q8N1A6 199 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 ARNTL2Q8WYA1 636 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 VIPAS39Q9H9C1 493 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 OSGEPQ9NPF4 335 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 MRPS23Q9Y3D9 190 aaKnown RBP12.01□□□□□ -0.49
SYNE1-204ENST00000367248 DUSP10Q9Y6W6 482 aa12.01□□□□□ -0.49
SYNE1-204ENST00000367248 A0A0A6YYK5 440 aaPredicted RBP12□□□□□ -0.49
SYNE1-204ENST00000367248 GJB1P08034 283 aa12□□□□□ -0.49
SYNE1-204ENST00000367248 IFNA8P32881 189 aa12□□□□□ -0.49
SYNE1-204ENST00000367248 HSPA9P38646 679 aaKnown RBP12□□□□□ -0.49
SYNE1-204ENST00000367248 RHOAP61586 193 aa12□□□□□ -0.49
SYNE1-204ENST00000367248 FUT2Q10981 343 aa12□□□□□ -0.49
SYNE1-204ENST00000367248 ZNF268Q14587 947 aaPredicted RBP12□□□□□ -0.49
SYNE1-204ENST00000367248 SPOCD1Q6ZMY3 1216 aa12□□□□□ -0.49
SYNE1-204ENST00000367248 ANKRD23Q86SG2 305 aa12□□□□□ -0.49
SYNE1-204ENST00000367248 MCOLN2Q8IZK6 566 aa12□□□□□ -0.49
SYNE1-204ENST00000367248 ATG4AQ8WYN0 398 aa12□□□□□ -0.49
SYNE1-204ENST00000367248 ADGRA2Q96PE1 1338 aa12□□□□□ -0.49
SYNE1-204ENST00000367248 LRRIQ3A6PVS8 624 aaPredicted RBP12□□□□□ -0.49
SYNE1-204ENST00000367248 FARP2O94887 1054 aaPredicted RBP12□□□□□ -0.49
SYNE1-204ENST00000367248 SNRPAP09012 282 aaKnown RBP12□□□□□ -0.49
SYNE1-204ENST00000367248 OCM2P0CE71 109 aa12□□□□□ -0.49
SYNE1-204ENST00000367248 OCMP0CE72 109 aaPredicted RBP12□□□□□ -0.49
SYNE1-204ENST00000367248 OTUD4Q01804 1114 aaKnown RBP12□□□□□ -0.49
SYNE1-204ENST00000367248 MAPK7Q13164 816 aa12□□□□□ -0.49
SYNE1-204ENST00000367248 CAPSQ13938 189 aa12□□□□□ -0.49
SYNE1-204ENST00000367248 KIAA0319LQ8IZA0 1049 aa12□□□□□ -0.49
SYNE1-204ENST00000367248 TMEM161BQ8NDZ6 487 aa12□□□□□ -0.49
SYNE1-204ENST00000367248 FLCNQ8NFG4 579 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms