RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 BEX3Q00994 111 aa8.78□□□□□ -1
YBX3-204ENST00000366290 STK3Q13188 491 aa8.78□□□□□ -1
YBX3-204ENST00000366290 TRIM25Q14258 630 aaKnown RBP8.78□□□□□ -1
YBX3-204ENST00000366290 ODF1Q14990 250 aa8.78□□□□□ -1
YBX3-204ENST00000366290 ARHGEF16Q5VV41 709 aa8.78□□□□□ -1
YBX3-204ENST00000366290 SYNE3Q6ZMZ3 975 aa8.78□□□□□ -1
YBX3-204ENST00000366290 LYSMD2Q8IV50 215 aa8.78□□□□□ -1
YBX3-204ENST00000366290 NECAB1Q8N987 351 aa8.78□□□□□ -1
YBX3-204ENST00000366290 GTF3C6Q969F1 213 aa8.78□□□□□ -1
YBX3-204ENST00000366290 TRIM43Q96BQ3 446 aaPredicted RBP8.78□□□□□ -1
YBX3-204ENST00000366290 PPP1R16BQ96T49 567 aa8.78□□□□□ -1
YBX3-204ENST00000366290 PDCD2LQ9BRP1 358 aa8.78□□□□□ -1
YBX3-204ENST00000366290 LUC7LQ9NQ29 371 aaKnown RBP8.78□□□□□ -1
YBX3-204ENST00000366290 FTSJ1Q9UET6 329 aa8.78□□□□□ -1
YBX3-204ENST00000366290 SEC63Q9UGP8 760 aaKnown RBP8.78□□□□□ -1
YBX3-204ENST00000366290 IP6K2Q9UHH9 426 aa8.78□□□□□ -1
YBX3-204ENST00000366290 TBX21Q9UL17 535 aa8.78□□□□□ -1
YBX3-204ENST00000366290 NAP1L2Q9ULW6 460 aaPredicted RBP8.78□□□□□ -1
YBX3-204ENST00000366290 LIMCH1Q9UPQ0 1083 aa8.78□□□□□ -1
YBX3-204ENST00000366290 GPR45Q9Y5Y3 372 aa8.78□□□□□ -1
YBX3-204ENST00000366290 GRIN2DO15399 1336 aa8.78□□□□□ -1
YBX3-204ENST00000366290 A0A0A6YYJ9 748 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 KRTAP4-8A0A0G2JLE6 195 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 hCG_1642624A0A1W2PR95 340 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 MAFGO15525 162 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 STAM2O75886 525 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 ARIH2O95376 493 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 KNG1P01042 644 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 CD4P01730 458 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 TXNP10599 105 aaKnown RBP8.77□□□□□ -1.01
YBX3-204ENST00000366290 OSMP13725 252 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 MTHFD2P13995 350 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 IFNAR1P17181 557 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 AGXTP21549 392 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 ITGB8P26012 769 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 HOXA13P31271 388 aaPredicted RBP8.77□□□□□ -1.01
YBX3-204ENST00000366290 MLLT6P55198 1093 aaPredicted RBP8.77□□□□□ -1.01
YBX3-204ENST00000366290 LGALS4P56470 323 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 PURAQ00577 322 aaKnown RBP8.77□□□□□ -1.01
YBX3-204ENST00000366290 ACAP2Q15057 778 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 PGM5Q15124 567 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 SHHQ15465 462 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 TMEM240Q5SV17 173 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 C9orf50Q5SZB4 431 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 XRRA1Q6P2D8 792 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 CNKSR3Q6P9H4 555 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 KCNV1Q6PIU1 500 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 CXCL17Q6UXB2 119 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 ATG14Q6ZNE5 492 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 SLC41A1Q8IVJ1 513 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 OR5AN1Q8NGI8 311 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 RSAD2Q8WXG1 361 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 TMX3Q96JJ7 454 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 RHOBTB2Q9BYZ6 727 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 SPATA6Q9NWH7 488 aaPredicted RBP8.77□□□□□ -1.01
YBX3-204ENST00000366290 PRSS50Q9UI38 385 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 ZNF180Q9UJW8 692 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 USP18Q9UMW8 372 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 PCDHB6Q9Y5E3 794 aa8.77□□□□□ -1.01
YBX3-204ENST00000366290 CCDC196A0A1B0GTZ2 297 aa8.76□□□□□ -1.01
YBX3-204ENST00000366290 hCG_1984214I3L0E3 225 aa8.76□□□□□ -1.01
YBX3-204ENST00000366290 PQBP1O60828 265 aaKnown RBP8.76□□□□□ -1.01
YBX3-204ENST00000366290 GH1P01241 217 aa8.76□□□□□ -1.01
YBX3-204ENST00000366290 CELA3BP08861 270 aa8.76□□□□□ -1.01
YBX3-204ENST00000366290 ZSCAN20P17040 1043 aaPredicted RBP8.76□□□□□ -1.01
YBX3-204ENST00000366290 PI3P19957 117 aa8.76□□□□□ -1.01
YBX3-204ENST00000366290 ICAM3P32942 547 aa8.76□□□□□ -1.01
YBX3-204ENST00000366290 ADCY8P40145 1251 aa8.76□□□□□ -1.01
YBX3-204ENST00000366290 ARHGAP1Q07960 439 aa8.76□□□□□ -1.01
YBX3-204ENST00000366290 ITGA7Q13683 1181 aa8.76□□□□□ -1.01
YBX3-204ENST00000366290 PRR31Q5SQ13 230 aa8.76□□□□□ -1.01
YBX3-204ENST00000366290 GRAMD4Q6IC98 578 aa8.76□□□□□ -1.01
YBX3-204ENST00000366290 TRMT10BQ6PF06 316 aaKnown RBP8.76□□□□□ -1.01
YBX3-204ENST00000366290 BMP8AQ7Z5Y6 402 aa8.76□□□□□ -1.01
YBX3-204ENST00000366290 CPA6Q8N4T0 437 aa8.76□□□□□ -1.01
YBX3-204ENST00000366290 ZNF713Q8N859 430 aaPredicted RBP8.76□□□□□ -1.01
YBX3-204ENST00000366290 NSUN7Q8NE18 718 aaKnown RBP8.76□□□□□ -1.01
YBX3-204ENST00000366290 PIBF1Q8WXW3 757 aa8.76□□□□□ -1.01
YBX3-204ENST00000366290 AUTS2Q8WXX7 1259 aa8.76□□□□□ -1.01
YBX3-204ENST00000366290 ZCCHC14Q8WYQ9 949 aaKnown RBP8.76□□□□□ -1.01
YBX3-204ENST00000366290 JADE3Q92613 823 aa8.76□□□□□ -1.01
YBX3-204ENST00000366290 PHKBQ93100 1093 aa8.76□□□□□ -1.01
YBX3-204ENST00000366290 SNX21Q969T3 373 aa8.76□□□□□ -1.01
YBX3-204ENST00000366290 TEKT5Q96M29 485 aa8.76□□□□□ -1.01
YBX3-204ENST00000366290 PWWP2AQ96N64 755 aa8.76□□□□□ -1.01
YBX3-204ENST00000366290 INPP4AQ96PE3 977 aaPredicted RBP8.76□□□□□ -1.01
YBX3-204ENST00000366290 LBHD1Q9BQE6 289 aaPredicted RBP8.76□□□□□ -1.01
YBX3-204ENST00000366290 TCF7L1Q9HCS4 588 aa8.76□□□□□ -1.01
YBX3-204ENST00000366290 DPP7Q9UHL4 492 aa8.76□□□□□ -1.01
YBX3-204ENST00000366290 INVSQ9Y283 1065 aa8.76□□□□□ -1.01
YBX3-204ENST00000366290 H0Y858 1186 aa8.75□□□□□ -1.01
YBX3-204ENST00000366290 PRPF3O43395 683 aaKnown RBP8.75□□□□□ -1.01
YBX3-204ENST00000366290 JAK2O60674 1132 aa8.75□□□□□ -1.01
YBX3-204ENST00000366290 TIMP1P01033 207 aa8.75□□□□□ -1.01
YBX3-204ENST00000366290 C1QTNF9P0C862 333 aa8.75□□□□□ -1.01
YBX3-204ENST00000366290 FDPSP14324 419 aaKnown RBP8.75□□□□□ -1.01
YBX3-204ENST00000366290 CCND2P30279 289 aa8.75□□□□□ -1.01
YBX3-204ENST00000366290 RAP1GAPP47736 663 aa8.75□□□□□ -1.01
YBX3-204ENST00000366290 MCM2P49736 904 aa8.75□□□□□ -1.01
YBX3-204ENST00000366290 EPHB4P54760 987 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms