RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 KCNA10Q16322 511 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 WDR59Q6PJI9 974 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 C12orf56Q8IXR9 622 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 NXF3Q9H4D5 531 aaKnown RBP14.39□□□□□ -0.11
CTR9-201ENST00000361367 FAM96AQ9H5X1 160 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 SMPD4Q9NXE4 827 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 PSMC3IPQ9P2W1 217 aaPredicted RBP14.39□□□□□ -0.11
CTR9-201ENST00000361367 SCN11AQ9UI33 1791 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 AGTP01019 485 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 KITP10721 976 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 NUMBP49757 651 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 SERPINB9P50453 376 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 KIF19Q2TAC6 998 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 SDE2Q6IQ49 451 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 LMNTD2Q8IXW0 634 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 CARNMT1Q8N4J0 409 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 TTC30BQ8N4P2 665 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 C3orf20Q8ND61 904 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 LENG1Q96BZ8 264 aaPredicted RBP14.39□□□□□ -0.11
CTR9-201ENST00000361367 STAMBPL1Q96FJ0 436 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 ZNF558Q96NG5 402 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 CDK5RAP1Q96SZ6 601 aaKnown RBP14.39□□□□□ -0.11
CTR9-201ENST00000361367 FGFBP2Q9BYJ0 223 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 L2HGDHQ9H9P8 463 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 TXLNGQ9NUQ3 528 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 EPHB6O15197 1021 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 OXCT1P55809 520 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 TBX4P57082 545 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 ERMARDQ5T6L9 678 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 UNC45BQ8IWX7 931 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 CNPY4Q8N129 248 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 SLAIN1Q8ND83 568 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 ADAM32Q8TC27 787 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 BSNDQ8WZ55 320 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 SHC3Q92529 594 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 SH3KBP1Q96B97 665 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 UROC1Q96N76 676 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 TGS1Q96RS0 853 aaKnown RBP14.39□□□□□ -0.11
CTR9-201ENST00000361367 EMILIN2Q9BXX0 1053 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 ULBP1Q9BZM6 244 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 DRC3Q9H069 523 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 DCTN4Q9UJW0 460 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 VPS28Q9UK41 221 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 DOT1LQ8TEK3 1739 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 SMIM24O75264 130 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 JCHAINP01591 159 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 GFAPP14136 432 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 SPRP35270 261 aaPredicted RBP14.39□□□□□ -0.11
CTR9-201ENST00000361367 HIRAP54198 1017 aaPredicted RBP14.39□□□□□ -0.11
CTR9-201ENST00000361367 GEMP55040 296 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 HABP4Q5JVS0 413 aaKnown RBP14.39□□□□□ -0.11
CTR9-201ENST00000361367 THEMIS2Q5TEJ8 643 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 TIGD7Q6NT04 549 aaPredicted RBP14.39□□□□□ -0.11
CTR9-201ENST00000361367 DENND5BQ6ZUT9 1274 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 ACAD11Q709F0 780 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 IFNL1Q8IU54 200 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 PDCD7Q8N8D1 485 aaKnown RBP14.39□□□□□ -0.11
CTR9-201ENST00000361367 OR2W6PQ8NHA6 318 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 TMEM121Q9BTD3 319 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 GIT1Q9Y2X7 761 aa14.39□□□□□ -0.11
CTR9-201ENST00000361367 SF3B1O75533 1304 aaKnown RBP eCLIP14.38□□□□□ -0.11
CTR9-201ENST00000361367 CNTNAP1P78357 1384 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 NOL3O60936 208 aaKnown RBP14.38□□□□□ -0.11
CTR9-201ENST00000361367 RTN3O95197 1032 aaPredicted RBP14.38□□□□□ -0.11
CTR9-201ENST00000361367 TTC4O95801 387 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 LTFP02788 710 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 RHOCP08134 193 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 CYP2F1P24903 491 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 PDAP1Q13442 181 aaKnown RBP14.38□□□□□ -0.11
CTR9-201ENST00000361367 FAM71AQ8IYT1 594 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 PPCSQ9HAB8 311 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 ALS2Q96Q42 1657 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 UNCXA6NJT0 531 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 CFLARO15519 480 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 PRKCZQ05513 592 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 CCNG2Q16589 344 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 BEND6Q5SZJ8 279 aaPredicted RBP14.38□□□□□ -0.11
CTR9-201ENST00000361367 GIPC2Q8TF65 315 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 SERPINB11Q96P15 392 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 ZBTB18Q99592 522 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 GANQ9H2C0 597 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 VIPAS39Q9H9C1 493 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 CHST12Q9NRB3 414 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 LATS2Q9NRM7 1088 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 OLA1Q9NTK5 396 aaKnown RBP14.38□□□□□ -0.11
CTR9-201ENST00000361367 PHF20L1A8MW92 1017 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 STX7O15400 261 aaKnown RBP14.38□□□□□ -0.11
CTR9-201ENST00000361367 DCTN3O75935 186 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 GJB6O95452 261 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 CALCAP01258 141 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 UCMAQ8WVF2 138 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 TSPAN17Q96FV3 270 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 FAM84AQ96KN4 292 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 MFSD14AQ96MC6 490 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 HIPK3Q9H422 1215 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 ALG13Q9NP73 1137 aaKnown RBP14.38□□□□□ -0.11
CTR9-201ENST00000361367 ARHGAP28Q9P2N2 729 aa14.38□□□□□ -0.11
CTR9-201ENST00000361367 GMNCA6NCL1 334 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 USP17L7P0C7H9 530 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 SESN3P58005 492 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms