RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 UVRAGQ9P2Y5 699 aa7.76□□□□□ -1.17
CLCN3-202ENST00000360642 A0A087WUV0 522 aaPredicted RBP7.75□□□□□ -1.17
CLCN3-202ENST00000360642 PODXLO00592 558 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 TM4SF5O14894 197 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 DYNC1LI2O43237 492 aaPredicted RBP7.75□□□□□ -1.17
CLCN3-202ENST00000360642 CPP00450 1065 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 CCND2P30279 289 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 EIF3BP55884 814 aaKnown RBP7.75□□□□□ -1.17
CLCN3-202ENST00000360642 BACE1P56817 501 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 IL2P60568 153 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 SLBPQ14493 270 aaKnown RBP eCLIP7.75□□□□□ -1.17
CLCN3-202ENST00000360642 SV2AQ7L0J3 742 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 SCUBE1Q8IWY4 988 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 ZNF564Q8TBZ8 553 aaPredicted RBP7.75□□□□□ -1.17
CLCN3-202ENST00000360642 KCNN1Q92952 543 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 USP7Q93009 1102 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 TLCD1Q96CP7 247 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 SLC2A13Q96QE2 648 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 NUP85Q9BW27 656 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 TRIM31Q9BZY9 425 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 TOPORSQ9NS56 1045 aaPredicted RBP7.75□□□□□ -1.17
CLCN3-202ENST00000360642 RNF146Q9NTX7 359 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 FAM105AQ9NUU6 356 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 THG1LQ9NWX6 298 aaKnown RBP7.75□□□□□ -1.17
CLCN3-202ENST00000360642 EDARQ9UNE0 448 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 ZNFX1Q9P2E3 1918 aaKnown RBP7.75□□□□□ -1.17
CLCN3-202ENST00000360642 ARID2Q68CP9 1835 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 TCRBV16S1A1N1A0A5B0 115 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 MSCO60682 206 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 PAEPP09466 180 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 OAZ1P54368 228 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 SOX10P56693 466 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 GCNT1Q02742 428 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 ACAD10Q6JQN1 1059 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 B4GALNT4Q76KP1 1039 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 NLRX1Q86UT6 975 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 NLRP14Q86W24 1093 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 SPATS2Q86XZ4 545 aaKnown RBP7.75□□□□□ -1.17
CLCN3-202ENST00000360642 CPNE8Q86YQ8 564 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 C12orf50Q8NA57 414 aaPredicted RBP7.75□□□□□ -1.17
CLCN3-202ENST00000360642 MYCBPAPQ8TBZ2 947 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 PSPC1Q8WXF1 523 aaKnown RBP7.75□□□□□ -1.17
CLCN3-202ENST00000360642 SLC39A13Q96H72 371 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 BTBD6Q96KE9 485 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 CEP170P1Q96L14 293 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 NT5C1BQ96P26 610 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 CCT8L2Q96SF2 557 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 PABPC3Q9H361 631 aaKnown RBP7.75□□□□□ -1.17
CLCN3-202ENST00000360642 XPNPEP1Q9NQW7 623 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 CNOT8Q9UFF9 292 aaKnown RBP7.75□□□□□ -1.17
CLCN3-202ENST00000360642 ZNF112Q9UJU3 913 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 TELO2Q9Y4R8 837 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 NFASCO94856 1347 aa7.75□□□□□ -1.17
CLCN3-202ENST00000360642 TCRBV7S2A1N4TA0A589 114 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 TMEM110-MUSTN1A8MSY1 372 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 TMPRSS2O15393 492 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 ZC3H11AO75152 810 aaKnown RBP eCLIP7.74□□□□□ -1.17
CLCN3-202ENST00000360642 DGAT1O75907 488 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 FAM107AO95990 144 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 SNRPB2P08579 225 aaKnown RBP7.74□□□□□ -1.17
CLCN3-202ENST00000360642 UNGP13051 313 aaPredicted RBP7.74□□□□□ -1.17
CLCN3-202ENST00000360642 HPDP32754 393 aaPredicted RBP7.74□□□□□ -1.17
CLCN3-202ENST00000360642 RPL21P46778 160 aaKnown RBP7.74□□□□□ -1.17
CLCN3-202ENST00000360642 PDE6CP51160 858 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 SEC24CP53992 1094 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 TMEM201Q5SNT2 666 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 CCDC137Q6PK04 289 aaKnown RBP7.74□□□□□ -1.17
CLCN3-202ENST00000360642 ENOSF1Q7L5Y1 443 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 SLC13A5Q86YT5 568 aaPredicted RBP7.74□□□□□ -1.17
CLCN3-202ENST00000360642 GPD1LQ8N335 351 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 SYNPOQ8N3V7 929 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 CISD2Q8N5K1 135 aaKnown RBP7.74□□□□□ -1.17
CLCN3-202ENST00000360642 FBXO25Q8TCJ0 367 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 ZNF473Q8WTR7 871 aaKnown RBP7.74□□□□□ -1.17
CLCN3-202ENST00000360642 PPM1EQ8WY54 764 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 MAGOHBQ96A72 148 aaKnown RBP7.74□□□□□ -1.17
CLCN3-202ENST00000360642 APBA2Q99767 749 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 MCMBPQ9BTE3 642 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 ARHGAP28Q9P2N2 729 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 TMEFF2Q9UIK5 374 aaPredicted RBP7.74□□□□□ -1.17
CLCN3-202ENST00000360642 RASAL2Q9UJF2 1139 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 GGA2Q9UJY4 613 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 FBXL21Q9UKT6 434 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 SNX24Q9Y343 169 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 SNCAIPQ9Y6H5 919 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 DOCK1Q14185 1865 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 GFRA3O60609 400 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 PF4V1P10720 104 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 LCP1P13796 627 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 RPS12P25398 132 aaKnown RBP7.74□□□□□ -1.17
CLCN3-202ENST00000360642 PMS2P54278 862 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 PLTPP55058 493 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 CLEC16AQ2KHT3 1053 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 SEL1L2Q5TEA6 688 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 ABHD15Q6UXT9 468 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 YTHDF3Q7Z739 585 aaKnown RBP7.74□□□□□ -1.17
CLCN3-202ENST00000360642 C11orf96Q7Z7L8 435 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 USP37Q86T82 979 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 TADA2BQ86TJ2 420 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 C3orf20Q8ND61 904 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms