RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 PDGFRBP09619 1106 aa19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 ETS1P14921 441 aa19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 SLCO1A2P46721 670 aa19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 TM4SF4P48230 202 aa19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 LILRA4P59901 499 aa19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 IFI35P80217 286 aaPredicted RBP19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 DPYSL3Q14195 570 aa19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 CDO1Q16878 200 aa19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 LONRF1Q17RB8 773 aa19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 CENPUQ71F23 418 aa19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 SCUBE3Q8IX30 993 aa19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 PPIL6Q8IXY8 311 aa19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 RIBC1Q8N443 379 aaPredicted RBP19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 MYCBPAPQ8TBZ2 947 aa19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 FAM172AQ8WUF8 416 aa19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 KHSRPQ92945 711 aaKnown RBP eCLIP19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 RNF157Q96PX1 679 aa19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 PPP1R10Q96QC0 940 aaKnown RBP19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 SELENOSQ9BQE4 189 aa19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 FAM107BQ9H098 131 aa19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 SAYSD1Q9NPB0 183 aa19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 NGRNQ9NPE2 291 aaKnown RBP19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 CCDC130P13994 396 aa19.11■□□□□ 0.65
PDLIM7-203ENST00000359895 PECAM1P16284 738 aaPredicted RBP19.11■□□□□ 0.65
PDLIM7-203ENST00000359895 ADORA2BP29275 332 aa19.11■□□□□ 0.65
PDLIM7-203ENST00000359895 STIP1P31948 543 aaKnown RBP19.11■□□□□ 0.65
PDLIM7-203ENST00000359895 NOMO1Q15155 1222 aa19.11■□□□□ 0.65
PDLIM7-203ENST00000359895 DEFB115Q30KQ5 88 aa19.11■□□□□ 0.65
PDLIM7-203ENST00000359895 NBPF20Q3BBV1 942 aa19.11■□□□□ 0.65
PDLIM7-203ENST00000359895 SH3PXD2AQ5TCZ1 1133 aa19.11■□□□□ 0.65
PDLIM7-203ENST00000359895 RPAINQ86UA6 219 aa19.11■□□□□ 0.65
PDLIM7-203ENST00000359895 ARRDC4Q8NCT1 418 aa19.11■□□□□ 0.65
PDLIM7-203ENST00000359895 PRCCQ92733 491 aaPredicted RBP19.11■□□□□ 0.65
PDLIM7-203ENST00000359895 P3H4Q92791 437 aa19.11■□□□□ 0.65
PDLIM7-203ENST00000359895 PWWP2AQ96N64 755 aa19.11■□□□□ 0.65
PDLIM7-203ENST00000359895 CCT8L2Q96SF2 557 aa19.11■□□□□ 0.65
PDLIM7-203ENST00000359895 PPANQ9NQ55 473 aaKnown RBP19.11■□□□□ 0.65
PDLIM7-203ENST00000359895 RNF19AQ9NV58 838 aa19.11■□□□□ 0.65
PDLIM7-203ENST00000359895 SAE1Q9UBE0 346 aaPredicted RBP19.11■□□□□ 0.65
PDLIM7-203ENST00000359895 LGALS13Q9UHV8 139 aa19.11■□□□□ 0.65
PDLIM7-203ENST00000359895 PTGESO14684 152 aa19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 GABBR2O75899 941 aa19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 RBP3P10745 1247 aa19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 TGM2P21980 687 aa19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 LMO2P25791 158 aa19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 CTGFP29279 349 aa19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 SLC8A3P57103 927 aa19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 ATP11AP98196 1134 aa19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 CCDC142Q17RM4 750 aa19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 EFHC1Q5JVL4 640 aa19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 SCYL2Q6P3W7 929 aa19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 SPATA18Q8TC71 538 aa19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 ZNF473Q8WTR7 871 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 HNRNPABQ99729 332 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 PPCSQ9HAB8 311 aa19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 GOLGA2P5Q9HBQ8 144 aa19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 FARP1Q9Y4F1 1045 aaPredicted RBP19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 XPO1O14980 1071 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 ALOX15BO15296 676 aa19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 CDH16O75309 829 aa19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 RPL22P35268 128 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 ROR1Q01973 937 aa19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 ERMARDQ5T6L9 678 aa19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 B3GALNT2Q8NCR0 500 aa19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 CENPIQ92674 756 aaPredicted RBP19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 C9orf72Q96LT7 481 aa19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 XPO6Q96QU8 1125 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 ZNF670Q9BS34 389 aa19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 RABEP2Q9H5N1 569 aa19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 FAM105AQ9NUU6 356 aa19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 ST3GAL5Q9UNP4 418 aa19.1■□□□□ 0.65
PDLIM7-203ENST00000359895 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.09■□□□□ 0.65
PDLIM7-203ENST00000359895 CFAP69A5D8W1 941 aa19.09■□□□□ 0.65
PDLIM7-203ENST00000359895 CYB561D2O14569 222 aa19.09■□□□□ 0.65
PDLIM7-203ENST00000359895 APOL1O14791 398 aa19.09■□□□□ 0.65
PDLIM7-203ENST00000359895 SEPT4O43236 478 aa19.09■□□□□ 0.65
PDLIM7-203ENST00000359895 RARBP10826 455 aa19.09■□□□□ 0.65
PDLIM7-203ENST00000359895 CHN1P15882 459 aa19.09■□□□□ 0.65
PDLIM7-203ENST00000359895 PSMC4P43686 418 aa19.09■□□□□ 0.65
PDLIM7-203ENST00000359895 CTCFP49711 727 aaPredicted RBP19.09■□□□□ 0.65
PDLIM7-203ENST00000359895 SEC24CP53992 1094 aa19.09■□□□□ 0.65
PDLIM7-203ENST00000359895 MMRN1Q13201 1228 aa19.09■□□□□ 0.65
PDLIM7-203ENST00000359895 GDF6Q6KF10 455 aaPredicted RBP19.09■□□□□ 0.65
PDLIM7-203ENST00000359895 DARS2Q6PI48 645 aaKnown RBP19.09■□□□□ 0.65
PDLIM7-203ENST00000359895 CXCL17Q6UXB2 119 aa19.09■□□□□ 0.65
PDLIM7-203ENST00000359895 MICALCLQ6ZW33 695 aa19.09■□□□□ 0.65
PDLIM7-203ENST00000359895 SRLQ86TD4 932 aa19.09■□□□□ 0.65
PDLIM7-203ENST00000359895 SERINC5Q86VE9 423 aa19.09■□□□□ 0.65
PDLIM7-203ENST00000359895 SLC2A14Q8TDB8 520 aa19.09■□□□□ 0.65
PDLIM7-203ENST00000359895 TRIB2Q92519 343 aa19.09■□□□□ 0.65
PDLIM7-203ENST00000359895 ARHGEF2Q92974 986 aaKnown RBP19.09■□□□□ 0.65
PDLIM7-203ENST00000359895 HHIPL1Q96JK4 782 aa19.09■□□□□ 0.65
PDLIM7-203ENST00000359895 CAPNS2Q96L46 248 aa19.09■□□□□ 0.65
PDLIM7-203ENST00000359895 LPIN3Q9BQK8 851 aa19.09■□□□□ 0.65
PDLIM7-203ENST00000359895 SNRNP25Q9BV90 132 aaKnown RBP19.09■□□□□ 0.65
PDLIM7-203ENST00000359895 B3GNT5Q9BYG0 378 aa19.09■□□□□ 0.65
PDLIM7-203ENST00000359895 SENP6Q9GZR1 1112 aaPredicted RBP19.09■□□□□ 0.65
PDLIM7-203ENST00000359895 PCDH18Q9HCL0 1135 aa19.09■□□□□ 0.65
PDLIM7-203ENST00000359895 GGA2Q9UJY4 613 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms