RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 ATG4CQ96DT6 458 aa18.98■□□□□ 0.63
SHANK1-202ENST00000359082 TRIM8Q9BZR9 551 aa18.98■□□□□ 0.63
SHANK1-202ENST00000359082 PADI4Q9UM07 663 aa18.98■□□□□ 0.63
SHANK1-202ENST00000359082 SLC37A4O43826 429 aa18.98■□□□□ 0.63
SHANK1-202ENST00000359082 GSTM1P09488 218 aa18.98■□□□□ 0.63
SHANK1-202ENST00000359082 SHROOM1Q2M3G4 852 aaPredicted RBP18.98■□□□□ 0.63
SHANK1-202ENST00000359082 NOD2Q9HC29 1040 aa18.98■□□□□ 0.63
SHANK1-202ENST00000359082 MAPK1P28482 360 aa18.98■□□□□ 0.63
SHANK1-202ENST00000359082 CASP4P49662 377 aa18.98■□□□□ 0.63
SHANK1-202ENST00000359082 TRIM16LQ309B1 348 aa18.98■□□□□ 0.63
SHANK1-202ENST00000359082 RIT2Q99578 217 aa18.98■□□□□ 0.63
SHANK1-202ENST00000359082 E9PBE3 544 aa18.98■□□□□ 0.63
SHANK1-202ENST00000359082 H7C4K7 107 aa18.98■□□□□ 0.63
SHANK1-202ENST00000359082 ACO1P21399 889 aaKnown RBP18.98■□□□□ 0.63
SHANK1-202ENST00000359082 PON1P27169 355 aa18.98■□□□□ 0.63
SHANK1-202ENST00000359082 AGPAT3Q9NRZ7 376 aa18.98■□□□□ 0.63
SHANK1-202ENST00000359082 OXCT1P55809 520 aa18.98■□□□□ 0.63
SHANK1-202ENST00000359082 CNPY4Q8N129 248 aa18.98■□□□□ 0.63
SHANK1-202ENST00000359082 B3GALNT2Q8NCR0 500 aa18.98■□□□□ 0.63
SHANK1-202ENST00000359082 MAGEB18Q96M61 343 aa18.98■□□□□ 0.63
SHANK1-202ENST00000359082 NUDT12Q9BQG2 462 aa18.98■□□□□ 0.63
SHANK1-202ENST00000359082 PLA2G12BQ9BX93 195 aa18.98■□□□□ 0.63
SHANK1-202ENST00000359082 GPRC5DQ9NZD1 345 aa18.98■□□□□ 0.63
SHANK1-202ENST00000359082 CETPP11597 493 aa18.97■□□□□ 0.63
SHANK1-202ENST00000359082 RAB14P61106 215 aa18.97■□□□□ 0.63
SHANK1-202ENST00000359082 UNKQ9C0B0 810 aaKnown RBP18.97■□□□□ 0.63
SHANK1-202ENST00000359082 STN1Q9H668 368 aaKnown RBP18.97■□□□□ 0.63
SHANK1-202ENST00000359082 TMCC3Q9ULS5 477 aa18.97■□□□□ 0.63
SHANK1-202ENST00000359082 RNF17Q9BXT8 1623 aaKnown RBP18.97■□□□□ 0.63
SHANK1-202ENST00000359082 TRPM1Q7Z4N2 1603 aa18.97■□□□□ 0.63
SHANK1-202ENST00000359082 ANXA11P50995 505 aaKnown RBP18.97■□□□□ 0.63
SHANK1-202ENST00000359082 ANTXR2P58335 489 aa18.97■□□□□ 0.63
SHANK1-202ENST00000359082 PRR5LQ6MZQ0 368 aa18.97■□□□□ 0.63
SHANK1-202ENST00000359082 CYP4Z1Q86W10 505 aa18.97■□□□□ 0.63
SHANK1-202ENST00000359082 ANKEF1Q9NU02 776 aa18.97■□□□□ 0.63
SHANK1-202ENST00000359082 UBQLN1Q9UMX0 589 aaKnown RBP18.97■□□□□ 0.63
SHANK1-202ENST00000359082 VTNP04004 478 aa18.97■□□□□ 0.63
SHANK1-202ENST00000359082 SLC2A3P11169 496 aa18.97■□□□□ 0.63
SHANK1-202ENST00000359082 HHIPL2Q6UWX4 724 aa18.97■□□□□ 0.63
SHANK1-202ENST00000359082 FEN1P39748 380 aaKnown RBP18.97■□□□□ 0.63
SHANK1-202ENST00000359082 GMPSP49915 693 aaPredicted RBP18.97■□□□□ 0.63
SHANK1-202ENST00000359082 TIGD7Q6NT04 549 aaPredicted RBP18.97■□□□□ 0.63
SHANK1-202ENST00000359082 SLFN11Q7Z7L1 901 aa18.97■□□□□ 0.63
SHANK1-202ENST00000359082 TDRD5Q8NAT2 981 aaKnown RBP18.97■□□□□ 0.63
SHANK1-202ENST00000359082 SYN2Q92777 582 aaPredicted RBP18.97■□□□□ 0.63
SHANK1-202ENST00000359082 GPRC5CQ9NQ84 441 aa18.97■□□□□ 0.63
SHANK1-202ENST00000359082 CYB561D2O14569 222 aa18.97■□□□□ 0.63
SHANK1-202ENST00000359082 SPTLC1O15269 473 aa18.97■□□□□ 0.63
SHANK1-202ENST00000359082 THRAP10827 490 aa18.97■□□□□ 0.63
SHANK1-202ENST00000359082 IRAK1P51617 712 aa18.97■□□□□ 0.63
SHANK1-202ENST00000359082 C11orf63Q6NUN7 778 aa18.97■□□□□ 0.63
SHANK1-202ENST00000359082 ADGRF2Q8IZF7 708 aa18.97■□□□□ 0.63
SHANK1-202ENST00000359082 GTF3C2Q8WUA4 911 aaPredicted RBP18.97■□□□□ 0.63
SHANK1-202ENST00000359082 OPTNQ96CV9 577 aa18.97■□□□□ 0.63
SHANK1-202ENST00000359082 MRPS26Q9BYN8 205 aaKnown RBP18.97■□□□□ 0.63
SHANK1-202ENST00000359082 UBE2OQ9C0C9 1292 aaKnown RBP18.97■□□□□ 0.63
SHANK1-202ENST00000359082 MAGEA13PA6NCF6 341 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 MSH4O15457 936 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 CELF2O95319 508 aaKnown RBP18.96■□□□□ 0.63
SHANK1-202ENST00000359082 MKNK1Q9BUB5 465 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 INTS13Q9NVM9 706 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 CYP39A1Q9NYL5 469 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 GNG14A0A1W2PPG7 69 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 FAM172AQ8WUF8 416 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 DNAJC16Q9Y2G8 782 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 SNX8Q9Y5X2 465 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 QRICH2Q9H0J4 1663 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 STAU1O95793 577 aaKnown RBP18.96■□□□□ 0.63
SHANK1-202ENST00000359082 STRA8Q7Z7C7 330 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 SUGP1Q8IWZ8 645 aaKnown RBP18.96■□□□□ 0.63
SHANK1-202ENST00000359082 TUBE1Q9UJT0 475 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 SESN1Q9Y6P5 492 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 HSMCR30P0CW71 290 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 PSMC3P17980 439 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 CHRNB3Q05901 458 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 MMRN1Q13201 1228 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 PLCL1Q15111 1095 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 BNC2Q6ZN30 1099 aaPredicted RBP18.96■□□□□ 0.63
SHANK1-202ENST00000359082 PHACTR4Q8IZ21 702 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 LINC00116Q8NCU8 138 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 FAM151AQ8WW52 585 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 APOL2Q9BQE5 337 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 SDR42E2A6NKP2 422 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 SNTNA6NMZ2 147 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 PDZK1P1A8MUH7 402 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 TK2O00142 265 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 NLRP9Q7RTR0 991 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 OR8H2Q8N162 312 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 FAM153AQ9UHL3 310 aa18.96■□□□□ 0.63
SHANK1-202ENST00000359082 ERVK-10P10266 1014 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 NUP62P37198 522 aaPredicted RBP18.95■□□□□ 0.62
SHANK1-202ENST00000359082 FNTAP49354 379 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 BOLA3Q53S33 107 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 ZNF438Q7Z4V0 828 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 RNF180Q86T96 592 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 HEATR4Q86WZ0 1026 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 SCUBE1Q8IWY4 988 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 CASP10Q92851 521 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 FAR2Q96K12 515 aa18.95■□□□□ 0.62
SHANK1-202ENST00000359082 PPP1R10Q96QC0 940 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms