RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 ALG13Q9NP73 1137 aaKnown RBP11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 CD320Q9NPF0 282 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 DDX43Q9NXZ2 648 aaKnown RBP11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 TCRBV5S1A1TA0A578 114 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 C5orf67F2Z3F1 127 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 TMEM189-UBE2V1I3L0A0 370 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 PPEF2O14830 753 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 FSCN2O14926 492 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 RRP9O43818 475 aaKnown RBP11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 PRPSAP2O60256 369 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 CFHP08603 1231 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 PYGMP11217 842 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 FGFR1P11362 822 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 PDGFRAP16234 1089 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 NPR3P17342 541 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 CTNNB1P35222 781 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 PTPN7P35236 360 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 AARSP49588 968 aaKnown RBP eCLIP11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 CLCNKBP51801 687 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 BOLA3Q53S33 107 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 HSP90B2PQ58FF3 399 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 CYP4A22Q5TCH4 519 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 CCNI2Q6ZMN8 369 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 C4orf50Q6ZRC1 276 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 ZNF598Q86UK7 904 aaKnown RBP11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 NPAS4Q8IUM7 802 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 CCDC105Q8IYK2 499 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 DCP1BQ8IZD4 617 aaKnown RBP11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 SIX6OS1Q8N1H7 587 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 C12orf50Q8NA57 414 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 BBOF1Q8ND07 529 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 UBA3Q8TBC4 463 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 SLC35F5Q8WV83 523 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 KCTD13Q8WZ19 329 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 ALG3Q92685 438 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 KHSRPQ92945 711 aaKnown RBP eCLIP11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 LPPQ93052 612 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 MAGOHBQ96A72 148 aaKnown RBP11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 BTBD6Q96KE9 485 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 UHRF1Q96T88 793 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 SYT15Q9BQS2 421 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 COLEC11Q9BWP8 271 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 VIPAS39Q9H9C1 493 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 GOLGA2P5Q9HBQ8 144 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 METTL5Q9NRN9 209 aaKnown RBP11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 FAM49BQ9NUQ9 324 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 RRN3Q9NYV6 651 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 HMGXB4Q9UGU5 601 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 PCYOX1Q9UHG3 505 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 STAP1Q9ULZ2 295 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 INPP5FQ9Y2H2 1132 aa11.27□□□□□ -0.61
TRAPPC4-201ENST00000359005 E5RJQ4 531 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 M0QZQ0 153 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 DPYSL4O14531 572 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 SPTLC1O15269 473 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 HSF2BPO75031 334 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 POMCP01189 267 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 KRT1P04264 644 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 ITGB1P05556 798 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 ADORA2BP29275 332 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 SSTR3P32745 418 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 RFC1P35251 1148 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 IRS1P35568 1242 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 LTBRP36941 435 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 TNNT3P45378 269 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 DRG2P55039 364 aaKnown RBP11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 RPL7AP62424 266 aaKnown RBP11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 VSNL1P62760 191 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 GUCY2DQ02846 1103 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 DLX2Q07687 328 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 PDE4CQ08493 712 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 ZNF211Q13398 564 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 ORC1Q13415 861 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 TFDP2Q14188 446 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 PDK2Q15119 407 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 CYP1B1Q16678 543 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 PTPROQ16827 1216 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 PKDCCQ504Y2 493 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 TFDP3Q5H9I0 405 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 WSCD1Q658N2 575 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 SLC26A9Q7LBE3 791 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 PHLDB2Q86SQ0 1253 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 VSIG1Q86XK7 387 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 C12orf29Q8N999 325 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 GSTCDQ8NEC7 633 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 MYCBPAPQ8TBZ2 947 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 SPPL3Q8TCT6 385 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 SLC2A14Q8TDB8 520 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 KRT35Q92764 455 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 LRRC45Q96CN5 670 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 SMARCD1Q96GM5 515 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 SUSD3Q96L08 255 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 PNKPQ96T60 521 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 AP1M1Q9BXS5 423 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 MAK16Q9BXY0 300 aaKnown RBP11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 LRRC19Q9H756 370 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 UBE2ZQ9H832 354 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 EPB41L5Q9HCM4 733 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 GDF3Q9NR23 364 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 MTRF1LQ9UGC7 380 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms