RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 THEMIS2Q5TEJ8 643 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 IZUMO2Q6UXV1 221 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 SLFN11Q7Z7L1 901 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 CEP41Q9BYV8 373 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 C10orf88Q9H8K7 445 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 CYP4F12Q9HCS2 524 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 ASTN1O14525 1302 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 ZNF197O14709 1029 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 MEIS2O14770 477 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 ANXA9O76027 345 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 MYO1DO94832 1006 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 TMCC1O94876 653 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 CYP2B6P20813 491 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 PNPLA4P41247 253 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 AUHQ13825 339 aaKnown RBP14.19□□□□□ -0.14
VCP-201ENST00000358901 SNX30Q5VWJ9 437 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 LINC00523Q86TU6 105 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 KCNQ5Q9NR82 932 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 GID8Q9NWU2 228 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 A0A087WZ62 844 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 TRPC5OSA6NMA1 111 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 TADA2AO75478 443 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 GRK2P25098 689 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 NBPF12Q5TAG4 269 aaPredicted RBP14.18□□□□□ -0.14
VCP-201ENST00000358901 ZNF75CPQ92670 426 aaPredicted RBP14.18□□□□□ -0.14
VCP-201ENST00000358901 ZBTB10Q96DT7 871 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 SPATA17Q96L03 361 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 FDXACB1Q9BRP7 624 aaPredicted RBP14.18□□□□□ -0.14
VCP-201ENST00000358901 PIH1D1Q9NWS0 290 aaKnown RBP14.18□□□□□ -0.14
VCP-201ENST00000358901 CD274Q9NZQ7 290 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 MOSPD1Q9UJG1 213 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 B3GAT3O94766 335 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 PYGLP06737 847 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 TWF1Q12792 350 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 ERMARDQ5T6L9 678 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 SEL1L3Q68CR1 1132 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 IRF2BP2Q7Z5L9 587 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 IARS2Q9NSE4 1012 aaKnown RBP14.18□□□□□ -0.14
VCP-201ENST00000358901 TNFRSF8P28908 595 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 NNMTP40261 264 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 MPP3Q13368 585 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 ITGA9Q13797 1035 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 DGKDQ16760 1214 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 TTC23LQ6PF05 361 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 CHSY1Q86X52 802 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 MAP4K3Q8IVH8 894 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 TUBGCP3Q96CW5 907 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 ZNF512Q96ME7 567 aaPredicted RBP14.18□□□□□ -0.14
VCP-201ENST00000358901 UBP1Q9NZI7 540 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 SAE1Q9UBE0 346 aaPredicted RBP14.18□□□□□ -0.14
VCP-201ENST00000358901 RUVBL2Q9Y230 463 aaKnown RBP14.18□□□□□ -0.14
VCP-201ENST00000358901 C15orf41Q9Y2V0 281 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 ZC3H4Q9UPT8 1303 aaKnown RBP14.18□□□□□ -0.14
VCP-201ENST00000358901 SYNDIG1LA6NDD5 238 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 H0Y626 953 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 TRIM16O95361 564 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 HSPA1AP0DMV8 641 aaKnown RBP14.18□□□□□ -0.14
VCP-201ENST00000358901 HSPA1BP0DMV9 641 aaKnown RBP14.18□□□□□ -0.14
VCP-201ENST00000358901 CHRM3P20309 590 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 SERPINB8P50452 374 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 LAMTOR4Q0VGL1 99 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 SNAPC2Q13487 334 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 VEPH1Q14D04 833 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 FBXO16Q8IX29 292 aaPredicted RBP14.18□□□□□ -0.14
VCP-201ENST00000358901 IQCKQ8N0W5 287 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 GANCQ8TET4 914 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 PRCCQ92733 491 aaPredicted RBP14.18□□□□□ -0.14
VCP-201ENST00000358901 TNFRSF25Q93038 417 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 FAM136AQ96C01 138 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 CPB2Q96IY4 423 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 SRPK1Q96SB4 655 aaKnown RBP14.18□□□□□ -0.14
VCP-201ENST00000358901 TMEM51Q9NW97 253 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 PKP3Q9Y446 797 aa14.18□□□□□ -0.14
VCP-201ENST00000358901 RPS12P25398 132 aaKnown RBP14.17□□□□□ -0.14
VCP-201ENST00000358901 NUMBP49757 651 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 BCAT1P54687 386 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 KCNK10P57789 538 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 CYLC2Q14093 348 aaPredicted RBP14.17□□□□□ -0.14
VCP-201ENST00000358901 CNGA2Q16280 664 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 TRMT5Q32P41 509 aaKnown RBP14.17□□□□□ -0.14
VCP-201ENST00000358901 SGO1Q5FBB7 561 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 IYDQ6PHW0 289 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 SAMD3Q8N6K7 520 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 POU5F2Q8N7G0 328 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 GPRC5AQ8NFJ5 357 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 IDI2Q9BXS1 227 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 ZCWPW1Q9H0M4 648 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 CYP3A43Q9HB55 503 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 C16orf96A6NNT2 1141 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 ZSCAN9O15535 394 aaPredicted RBP14.17□□□□□ -0.14
VCP-201ENST00000358901 MT-CO1P00395 513 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 HIST1H2AGP0C0S8 130 aaPredicted RBP14.17□□□□□ -0.14
VCP-201ENST00000358901 HIST1H2ADP20671 130 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 CYP2F1P24903 491 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 FAAP100Q0VG06 881 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 AGAP9Q5VTM2 703 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 MFSD14CQ5VZR4 134 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 BNC2Q6ZN30 1099 aaPredicted RBP14.17□□□□□ -0.14
VCP-201ENST00000358901 TMPRSS6Q8IU80 811 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 DEFB107AQ8IZN7 70 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms