RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 B4GALT4O60513 344 aa18.45■□□□□ 0.54
RTN4-204ENST00000357732 TRUB2O95900 331 aaKnown RBP18.45■□□□□ 0.54
RTN4-204ENST00000357732 TNNC2P02585 160 aa18.45■□□□□ 0.54
RTN4-204ENST00000357732 PRKCHP24723 683 aa18.45■□□□□ 0.54
RTN4-204ENST00000357732 MAGEA6P43360 314 aa18.45■□□□□ 0.54
RTN4-204ENST00000357732 STXBP2Q15833 593 aa18.45■□□□□ 0.54
RTN4-204ENST00000357732 DNAL1Q4LDG9 190 aa18.45■□□□□ 0.54
RTN4-204ENST00000357732 ZNF394Q53GI3 561 aa18.45■□□□□ 0.54
RTN4-204ENST00000357732 KCNT1Q5JUK3 1230 aa18.45■□□□□ 0.54
RTN4-204ENST00000357732 TMEM154Q6P9G4 183 aa18.45■□□□□ 0.54
RTN4-204ENST00000357732 RINLQ6ZS11 566 aa18.45■□□□□ 0.54
RTN4-204ENST00000357732 NET1Q7Z628 596 aaPredicted RBP18.45■□□□□ 0.54
RTN4-204ENST00000357732 EXOC8Q8IYI6 725 aa18.45■□□□□ 0.54
RTN4-204ENST00000357732 ZNF526Q8TF50 670 aaPredicted RBP18.45■□□□□ 0.54
RTN4-204ENST00000357732 SCG3Q8WXD2 468 aaKnown RBP18.45■□□□□ 0.54
RTN4-204ENST00000357732 MCRS1Q96EZ8 462 aa18.45■□□□□ 0.54
RTN4-204ENST00000357732 SRPK1Q96SB4 655 aaKnown RBP18.45■□□□□ 0.54
RTN4-204ENST00000357732 KLF6Q99612 283 aaPredicted RBP18.45■□□□□ 0.54
RTN4-204ENST00000357732 FBXO6Q9NRD1 293 aaPredicted RBP18.45■□□□□ 0.54
RTN4-204ENST00000357732 USP18Q9UMW8 372 aa18.45■□□□□ 0.54
RTN4-204ENST00000357732 PLLPQ9Y342 182 aa18.45■□□□□ 0.54
RTN4-204ENST00000357732 CAPN14A8MX76 684 aa18.44■□□□□ 0.54
RTN4-204ENST00000357732 MAFO75444 373 aaPredicted RBP18.44■□□□□ 0.54
RTN4-204ENST00000357732 TNFSF9P41273 254 aa18.44■□□□□ 0.54
RTN4-204ENST00000357732 YWHAGP61981 247 aaKnown RBP eCLIP18.44■□□□□ 0.54
RTN4-204ENST00000357732 CNTN2Q02246 1040 aa18.44■□□□□ 0.54
RTN4-204ENST00000357732 TRMT5Q32P41 509 aaKnown RBP18.44■□□□□ 0.54
RTN4-204ENST00000357732 SEZ6Q53EL9 994 aa18.44■□□□□ 0.54
RTN4-204ENST00000357732 C6orf163Q5TEZ5 329 aa18.44■□□□□ 0.54
RTN4-204ENST00000357732 KIAA0319LQ8IZA0 1049 aa18.44■□□□□ 0.54
RTN4-204ENST00000357732 SMC1BQ8NDV3 1235 aa18.44■□□□□ 0.54
RTN4-204ENST00000357732 ANKRD36BP1Q96IX9 119 aa18.44■□□□□ 0.54
RTN4-204ENST00000357732 ACO2Q99798 780 aaKnown RBP18.44■□□□□ 0.54
RTN4-204ENST00000357732 CCDC28BQ9BUN5 200 aa18.44■□□□□ 0.54
RTN4-204ENST00000357732 BCO2Q9BYV7 579 aa18.44■□□□□ 0.54
RTN4-204ENST00000357732 MIS12Q9H081 205 aa18.44■□□□□ 0.54
RTN4-204ENST00000357732 C1orf21Q9H246 121 aa18.44■□□□□ 0.54
RTN4-204ENST00000357732 MAP3K7O43318 606 aa18.44■□□□□ 0.54
RTN4-204ENST00000357732 C1QAP02745 245 aa18.44■□□□□ 0.54
RTN4-204ENST00000357732 MIPP30301 263 aa18.44■□□□□ 0.54
RTN4-204ENST00000357732 PGM1P36871 562 aa18.44■□□□□ 0.54
RTN4-204ENST00000357732 SP2Q02086 613 aa18.44■□□□□ 0.54
RTN4-204ENST00000357732 NBPF12Q5TAG4 269 aaPredicted RBP18.44■□□□□ 0.54
RTN4-204ENST00000357732 DARS2Q6PI48 645 aaKnown RBP18.44■□□□□ 0.54
RTN4-204ENST00000357732 IGDCC3Q8IVU1 814 aa18.44■□□□□ 0.54
RTN4-204ENST00000357732 PDCD7Q8N8D1 485 aaKnown RBP18.44■□□□□ 0.54
RTN4-204ENST00000357732 TRAPPC9Q96Q05 1148 aa18.44■□□□□ 0.54
RTN4-204ENST00000357732 TSC22D3Q99576 134 aa18.44■□□□□ 0.54
RTN4-204ENST00000357732 TCHPQ9BT92 498 aa18.44■□□□□ 0.54
RTN4-204ENST00000357732 YIPF3Q9GZM5 350 aa18.44■□□□□ 0.54
RTN4-204ENST00000357732 METTL5Q9NRN9 209 aaKnown RBP18.44■□□□□ 0.54
RTN4-204ENST00000357732 SIRPGQ9P1W8 387 aa18.44■□□□□ 0.54
RTN4-204ENST00000357732 BIRC5O15392 142 aa18.43■□□□□ 0.54
RTN4-204ENST00000357732 TBX10O75333 385 aa18.43■□□□□ 0.54
RTN4-204ENST00000357732 KRT36O76013 467 aa18.43■□□□□ 0.54
RTN4-204ENST00000357732 PDHA1P08559 390 aa18.43■□□□□ 0.54
RTN4-204ENST00000357732 CD48P09326 243 aa18.43■□□□□ 0.54
RTN4-204ENST00000357732 HARSP12081 509 aaKnown RBP18.43■□□□□ 0.54
RTN4-204ENST00000357732 SP100P23497 879 aaPredicted RBP18.43■□□□□ 0.54
RTN4-204ENST00000357732 TMEM132BQ14DG7 1078 aa18.43■□□□□ 0.54
RTN4-204ENST00000357732 IER5Q5VY09 327 aa18.43■□□□□ 0.54
RTN4-204ENST00000357732 FAM160B1Q5W0V3 765 aa18.43■□□□□ 0.54
RTN4-204ENST00000357732 ILDR2Q71H61 639 aa18.43■□□□□ 0.54
RTN4-204ENST00000357732 ZBTB8OSQ8IWT0 167 aa18.43■□□□□ 0.54
RTN4-204ENST00000357732 NR1H4Q96RI1 486 aaPredicted RBP18.43■□□□□ 0.54
RTN4-204ENST00000357732 C2orf40Q9H1Z8 148 aa18.43■□□□□ 0.54
RTN4-204ENST00000357732 FAM124BQ9H5Z6 455 aaPredicted RBP18.43■□□□□ 0.54
RTN4-204ENST00000357732 FZD1Q9UP38 647 aa18.43■□□□□ 0.54
RTN4-204ENST00000357732 MAGEA13PA6NCF6 341 aa18.42■□□□□ 0.54
RTN4-204ENST00000357732 KRT38O76015 456 aa18.42■□□□□ 0.54
RTN4-204ENST00000357732 HOXC6P09630 235 aa18.42■□□□□ 0.54
RTN4-204ENST00000357732 ZNF143P52747 638 aaPredicted RBP18.42■□□□□ 0.54
RTN4-204ENST00000357732 MXD4Q14582 209 aaPredicted RBP18.42■□□□□ 0.54
RTN4-204ENST00000357732 MAP7D3Q8IWC1 876 aa18.42■□□□□ 0.54
RTN4-204ENST00000357732 FAF2Q96CS3 445 aa18.42■□□□□ 0.54
RTN4-204ENST00000357732 FAM167AQ96KS9 214 aa18.42■□□□□ 0.54
RTN4-204ENST00000357732 ZNF184Q99676 751 aaPredicted RBP18.42■□□□□ 0.54
RTN4-204ENST00000357732 SYT15Q9BQS2 421 aa18.42■□□□□ 0.54
RTN4-204ENST00000357732 NMUR2Q9GZQ4 415 aa18.42■□□□□ 0.54
RTN4-204ENST00000357732 TTLL3Q9Y4R7 772 aa18.42■□□□□ 0.54
RTN4-204ENST00000357732 CD19P15391 556 aa18.42■□□□□ 0.54
RTN4-204ENST00000357732 PEX19P40855 299 aa18.42■□□□□ 0.54
RTN4-204ENST00000357732 HMGCS2P54868 508 aa18.42■□□□□ 0.54
RTN4-204ENST00000357732 EN1Q05925 392 aaPredicted RBP18.42■□□□□ 0.54
RTN4-204ENST00000357732 ARCQ7LC44 396 aa18.42■□□□□ 0.54
RTN4-204ENST00000357732 NRG4Q8WWG1 115 aa18.42■□□□□ 0.54
RTN4-204ENST00000357732 USP6NLQ92738 828 aa18.42■□□□□ 0.54
RTN4-204ENST00000357732 E2F7Q96AV8 911 aa18.42■□□□□ 0.54
RTN4-204ENST00000357732 CPXM1Q96SM3 734 aa18.42■□□□□ 0.54
RTN4-204ENST00000357732 CALN1Q9BXU9 219 aa18.42■□□□□ 0.54
RTN4-204ENST00000357732 KLC2Q9H0B6 622 aa18.42■□□□□ 0.54
RTN4-204ENST00000357732 C12orf65Q9H3J6 166 aaKnown RBP18.42■□□□□ 0.54
RTN4-204ENST00000357732 C10orf88Q9H8K7 445 aa18.42■□□□□ 0.54
RTN4-204ENST00000357732 ALG13Q9NP73 1137 aaKnown RBP18.42■□□□□ 0.54
RTN4-204ENST00000357732 DDX43Q9NXZ2 648 aaKnown RBP18.42■□□□□ 0.54
RTN4-204ENST00000357732 CYTH4Q9UIA0 394 aa18.42■□□□□ 0.54
RTN4-204ENST00000357732 TNS1Q9HBL0 1735 aaKnown RBP18.42■□□□□ 0.54
RTN4-204ENST00000357732 TRIM49D1C9J1S8 452 aa18.41■□□□□ 0.54
RTN4-204ENST00000357732 CIB2O75838 187 aa18.41■□□□□ 0.54
RTN4-204ENST00000357732 TOMM70O94826 608 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms