RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 PLD1Q13393 1074 aa26.7■■□□□ 1.87
SSBP3-202ENST00000357475 TAF5Q15542 800 aa26.7■■□□□ 1.87
SSBP3-202ENST00000357475 TMEM184AQ6ZMB5 413 aa26.7■■□□□ 1.87
SSBP3-202ENST00000357475 SIX6OS1Q8N1H7 587 aa26.7■■□□□ 1.87
SSBP3-202ENST00000357475 IPO4Q8TEX9 1081 aaKnown RBP26.7■■□□□ 1.87
SSBP3-202ENST00000357475 PSMG2Q969U7 264 aa26.7■■□□□ 1.87
SSBP3-202ENST00000357475 ARHGEF26Q96DR7 871 aa26.7■■□□□ 1.87
SSBP3-202ENST00000357475 CYLDQ9NQC7 956 aa26.7■■□□□ 1.87
SSBP3-202ENST00000357475 CLEC1BQ9P126 229 aa26.7■■□□□ 1.87
SSBP3-202ENST00000357475 PCDHA13Q9Y5I0 950 aa26.7■■□□□ 1.87
SSBP3-202ENST00000357475 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.7■■□□□ 1.872e-6■■■□□ 16.3
SSBP3-202ENST00000357475 C5orf42Q9H799 3197 aa26.7■■□□□ 1.87
SSBP3-202ENST00000357475 RCCD1A6NED2 376 aa26.7■■□□□ 1.86
SSBP3-202ENST00000357475 SPDYE4A6NLX3 237 aa26.7■■□□□ 1.86
SSBP3-202ENST00000357475 ACADSBP45954 432 aa26.7■■□□□ 1.86
SSBP3-202ENST00000357475 C1QBPQ07021 282 aaKnown RBP26.7■■□□□ 1.86
SSBP3-202ENST00000357475 CCDC85BQ15834 202 aaPredicted RBP26.7■■□□□ 1.86
SSBP3-202ENST00000357475 CTC1Q2NKJ3 1217 aa26.7■■□□□ 1.86
SSBP3-202ENST00000357475 OR6B2Q6IFH4 312 aa26.7■■□□□ 1.86
SSBP3-202ENST00000357475 TMC5Q6UXY8 1006 aa26.7■■□□□ 1.86
SSBP3-202ENST00000357475 LRRC3Q9BY71 257 aa26.7■■□□□ 1.86
SSBP3-202ENST00000357475 SPTBN5Q9NRC6 3674 aaKnown RBP26.69■■□□□ 1.86
SSBP3-202ENST00000357475 GOLGA8SH3BPF8 625 aa26.69■■□□□ 1.86
SSBP3-202ENST00000357475 MAGEA1P43355 309 aa26.69■■□□□ 1.86
SSBP3-202ENST00000357475 VEPH1Q14D04 833 aa26.69■■□□□ 1.86
SSBP3-202ENST00000357475 SYCE2Q6PIF2 218 aa26.69■■□□□ 1.86
SSBP3-202ENST00000357475 OLFML1Q6UWY5 402 aa26.69■■□□□ 1.86
SSBP3-202ENST00000357475 HFE2Q6ZVN8 426 aa26.69■■□□□ 1.86
SSBP3-202ENST00000357475 TMC8Q8IU68 726 aa26.69■■□□□ 1.86
SSBP3-202ENST00000357475 ZNF653Q96CK0 615 aa26.69■■□□□ 1.86
SSBP3-202ENST00000357475 TTLL2Q9BWV7 592 aa26.69■■□□□ 1.86
SSBP3-202ENST00000357475 ZDHHC7Q9NXF8 308 aa26.69■■□□□ 1.86
SSBP3-202ENST00000357475 CLDND1Q9NY35 253 aa26.69■■□□□ 1.86
SSBP3-202ENST00000357475 PYCARDQ9ULZ3 195 aa26.69■■□□□ 1.86
SSBP3-202ENST00000357475 ANAPC1Q9H1A4 1944 aa26.69■■□□□ 1.86
SSBP3-202ENST00000357475 TCRBV5S1A1TA0A578 114 aa26.68■■□□□ 1.86
SSBP3-202ENST00000357475 YJEFN3A6XGL0 299 aa26.68■■□□□ 1.86
SSBP3-202ENST00000357475 E7ENQ6 273 aa26.68■■□□□ 1.86
SSBP3-202ENST00000357475 ZBED1O96006 694 aa26.68■■□□□ 1.86
SSBP3-202ENST00000357475 CSH1P0DML2 217 aa26.68■■□□□ 1.86
SSBP3-202ENST00000357475 CSH2P0DML3 217 aa26.68■■□□□ 1.86
SSBP3-202ENST00000357475 FOSL2P15408 326 aa26.68■■□□□ 1.86
SSBP3-202ENST00000357475 YWHAQP27348 245 aa26.68■■□□□ 1.86
SSBP3-202ENST00000357475 HOXA9P31269 272 aa26.68■■□□□ 1.86
SSBP3-202ENST00000357475 LTBRP36941 435 aa26.68■■□□□ 1.86
SSBP3-202ENST00000357475 DAOAP59103 153 aa26.68■■□□□ 1.86
SSBP3-202ENST00000357475 TAF10Q12962 218 aa26.68■■□□□ 1.86
SSBP3-202ENST00000357475 SPA17Q15506 151 aa26.68■■□□□ 1.86
SSBP3-202ENST00000357475 RARS2Q5T160 578 aaKnown RBP26.68■■□□□ 1.86
SSBP3-202ENST00000357475 PM20D1Q6GTS8 502 aa26.68■■□□□ 1.86
SSBP3-202ENST00000357475 ANKRD54Q6NXT1 300 aa26.68■■□□□ 1.86
SSBP3-202ENST00000357475 RTL10Q7L3V2 364 aa26.68■■□□□ 1.86
SSBP3-202ENST00000357475 KHSRPQ92945 711 aaKnown RBP eCLIP26.68■■□□□ 1.866e-7■■■□□ 16.7
SSBP3-202ENST00000357475 PRKD2Q9BZL6 878 aa26.68■■□□□ 1.86
SSBP3-202ENST00000357475 SFXN1Q9H9B4 322 aa26.68■■□□□ 1.86
SSBP3-202ENST00000357475 CNGB3Q9NQW8 809 aa26.68■■□□□ 1.86
SSBP3-202ENST00000357475 GMIPQ9P107 970 aa26.68■■□□□ 1.86
SSBP3-202ENST00000357475 DNMT3BQ9UBC3 853 aaKnown RBP26.68■■□□□ 1.86
SSBP3-202ENST00000357475 MYO1AQ9UBC5 1043 aa26.68■■□□□ 1.86
SSBP3-202ENST00000357475 ADGRG1Q9Y653 693 aa26.68■■□□□ 1.86
SSBP3-202ENST00000357475 NCANO14594 1321 aa26.68■■□□□ 1.86
SSBP3-202ENST00000357475 DENND4CQ5VZ89 1909 aa26.67■■□□□ 1.86
SSBP3-202ENST00000357475 FAM92AA1XBS5 289 aa26.67■■□□□ 1.86
SSBP3-202ENST00000357475 TADA3O75528 432 aa26.67■■□□□ 1.86
SSBP3-202ENST00000357475 GRAP2O75791 330 aa26.67■■□□□ 1.86
SSBP3-202ENST00000357475 RTN3O95197 1032 aaPredicted RBP26.67■■□□□ 1.86
SSBP3-202ENST00000357475 CALB1P05937 261 aa26.67■■□□□ 1.86
SSBP3-202ENST00000357475 HNRNPA1P09651 372 aaKnown RBP eCLIP26.67■■□□□ 1.86
SSBP3-202ENST00000357475 H2AFZP0C0S5 128 aa26.67■■□□□ 1.86
SSBP3-202ENST00000357475 NTHL1P78549 312 aa26.67■■□□□ 1.86
SSBP3-202ENST00000357475 MRPS5P82675 430 aaKnown RBP26.67■■□□□ 1.86
SSBP3-202ENST00000357475 COL19A1Q14993 1142 aa26.67■■□□□ 1.86
SSBP3-202ENST00000357475 EP400NLQ6ZTU2 488 aa26.67■■□□□ 1.86
SSBP3-202ENST00000357475 H2AFVQ71UI9 128 aa26.67■■□□□ 1.86
SSBP3-202ENST00000357475 SCD5Q86SK9 330 aa26.67■■□□□ 1.86
SSBP3-202ENST00000357475 FBXO32Q969P5 355 aa26.67■■□□□ 1.86
SSBP3-202ENST00000357475 MCRS1Q96EZ8 462 aa26.67■■□□□ 1.86
SSBP3-202ENST00000357475 MYRFLQ96LU7 910 aa26.67■■□□□ 1.86
SSBP3-202ENST00000357475 CEP295NLQ96MC4 621 aa26.67■■□□□ 1.86
SSBP3-202ENST00000357475 ZNF512Q96ME7 567 aaPredicted RBP26.67■■□□□ 1.86
SSBP3-202ENST00000357475 CORO1BQ9BR76 489 aa26.67■■□□□ 1.86
SSBP3-202ENST00000357475 NMUR1Q9HB89 426 aa26.67■■□□□ 1.86
SSBP3-202ENST00000357475 IL21Q9HBE4 155 aa26.67■■□□□ 1.86
SSBP3-202ENST00000357475 DZANK1Q9NVP4 752 aa26.67■■□□□ 1.86
SSBP3-202ENST00000357475 CNOT8Q9UFF9 292 aaKnown RBP26.67■■□□□ 1.86
SSBP3-202ENST00000357475 DPP7Q9UHL4 492 aa26.67■■□□□ 1.86
SSBP3-202ENST00000357475 SCML2Q9UQR0 700 aa26.67■■□□□ 1.86
SSBP3-202ENST00000357475 BRWD1Q9NSI6 2320 aa26.67■■□□□ 1.86
SSBP3-202ENST00000357475 TAF12Q16514 161 aa26.66■■□□□ 1.86
SSBP3-202ENST00000357475 TMEM150AQ86TG1 271 aa26.66■■□□□ 1.86
SSBP3-202ENST00000357475 MSANTD4Q8NCY6 345 aa26.66■■□□□ 1.86
SSBP3-202ENST00000357475 VCPIP1Q96JH7 1222 aa26.66■■□□□ 1.86
SSBP3-202ENST00000357475 OSER1Q9NX31 292 aa26.66■■□□□ 1.86
SSBP3-202ENST00000357475 ASB3Q9Y575 518 aa26.66■■□□□ 1.86
SSBP3-202ENST00000357475 ANKRD62A6NC57 917 aa26.65■■□□□ 1.86
SSBP3-202ENST00000357475 SLC6A3Q01959 620 aa26.65■■□□□ 1.86
SSBP3-202ENST00000357475 GRASPQ7Z6J2 395 aaPredicted RBP26.65■■□□□ 1.86
SSBP3-202ENST00000357475 ITIH5Q86UX2 942 aa26.65■■□□□ 1.86
SSBP3-202ENST00000357475 PPM1EQ8WY54 764 aa26.65■■□□□ 1.86
SSBP3-202ENST00000357475 TRMT2BQ96GJ1 504 aaKnown RBP26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms