RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 ABT1Q9ULW3 272 aaKnown RBP15.33■□□□□ 0.04
CHD4-201ENST00000357008 ACOT9Q9Y305 439 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 SETD1BQ9UPS6 1966 aaKnown RBP15.33■□□□□ 0.04
CHD4-201ENST00000357008 SARSP49591 514 aaKnown RBP15.33■□□□□ 0.04
CHD4-201ENST00000357008 STRA8Q7Z7C7 330 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 CENPLQ8N0S6 344 aaPredicted RBP15.33■□□□□ 0.04
CHD4-201ENST00000357008 BTN2A2Q8WVV5 523 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 TRAPPC9Q96Q05 1148 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 CBWD1Q9BRT8 395 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 DDIT4Q9NX09 232 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 FSBPO95073 299 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 CHSY1Q86X52 802 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 TDRD5Q8NAT2 981 aaKnown RBP15.33■□□□□ 0.04
CHD4-201ENST00000357008 RSPH1Q8WYR4 309 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 LRRN4CLQ8ND94 238 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 PGM2Q96G03 612 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 GDF3Q9NR23 364 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 IARS2Q9NSE4 1012 aaKnown RBP15.32■□□□□ 0.04
CHD4-201ENST00000357008 F8W810 466 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 GUCA1CO95843 209 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 PYGMP11217 842 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 ERVK-9P63128 1117 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 NT5DC1Q5TFE4 455 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 PACS2Q86VP3 889 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 ZNF512Q96ME7 567 aaPredicted RBP15.32■□□□□ 0.04
CHD4-201ENST00000357008 SPASTQ9UBP0 616 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 SNTNA6NMZ2 147 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 RGS2P41220 211 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 GLRBP48167 497 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 RPL10AP62906 217 aaKnown RBP15.32■□□□□ 0.04
CHD4-201ENST00000357008 HPCAP84074 193 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 SLC20A1Q8WUM9 679 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 TMEM79Q9BSE2 394 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 ZNF70Q9UC06 446 aaPredicted RBP15.32■□□□□ 0.04
CHD4-201ENST00000357008 SLC2A3P11169 496 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 ST8SIA6P61647 398 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 SPDYCQ5MJ68 293 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 LPCAT2Q7L5N7 544 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 ZNF720Q7Z2F6 126 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 STKLD1Q8NE28 680 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 TLR10Q9BXR5 811 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 PIDD1Q9HB75 910 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 DPP3Q9NY33 737 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 DRG1Q9Y295 367 aaKnown RBP15.32■□□□□ 0.04
CHD4-201ENST00000357008 SPHKAPQ2M3C7 1700 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 NTSR2O95665 410 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 MYCP01106 439 aaPredicted RBP15.32■□□□□ 0.04
CHD4-201ENST00000357008 RAD23AP54725 363 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 NOTUMQ6P988 496 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 SH3GL1Q99961 368 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 TRPC7Q9HCX4 862 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 CRLS1Q9UJA2 301 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 USP18Q9UMW8 372 aa15.32■□□□□ 0.04
CHD4-201ENST00000357008 UBQLN1Q9UMX0 589 aaKnown RBP15.32■□□□□ 0.04
CHD4-201ENST00000357008 FCHO1O14526 889 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 F9P00740 461 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 TRIP4Q15650 581 aaPredicted RBP15.31■□□□□ 0.04
CHD4-201ENST00000357008 HIST2H2ACQ16777 129 aaPredicted RBP15.31■□□□□ 0.04
CHD4-201ENST00000357008 HIST2H2AA3Q6FI13 130 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.31■□□□□ 0.04
CHD4-201ENST00000357008 DCLK3Q9C098 648 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 UNC13BO14795 1591 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 PTPRUQ92729 1446 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 ZSCAN5CA6NGD5 496 aaPredicted RBP15.31■□□□□ 0.04
CHD4-201ENST00000357008 VPS26AO75436 327 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 MGAT5Q09328 741 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 SLC47A2Q86VL8 602 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 FAM172AQ8WUF8 416 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 CATSPER2Q96P56 530 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 CGRRF1Q99675 332 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 MMADHCQ9H3L0 296 aaPredicted RBP15.31■□□□□ 0.04
CHD4-201ENST00000357008 C2orf81A6NN90 581 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 MAP3K6O95382 1288 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 FAM153BP0C7A2 387 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 SREBF1P36956 1147 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 FAM153CQ494X1 144 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 ARMCX4Q5H9R4 360 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 NUDT18Q6ZVK8 323 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 OTOAQ7RTW8 1153 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 CHST13Q8NET6 341 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 HDAC7Q8WUI4 952 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 ZFRQ96KR1 1074 aaKnown RBP15.31■□□□□ 0.04
CHD4-201ENST00000357008 SIKE1Q9BRV8 207 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 SPATA16Q9BXB7 569 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 ZNRF3Q9ULT6 936 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 CLCA2Q9UQC9 943 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 DYNC1LI2O43237 492 aaPredicted RBP15.31■□□□□ 0.04
CHD4-201ENST00000357008 MAPK1P28482 360 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 MPP3Q13368 585 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 ATP6AP1LQ52LC2 224 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 ACTL9Q8TC94 416 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 TAAR1Q96RJ0 339 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 TCF7L2Q9NQB0 619 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 ATP5BP06576 529 aaKnown RBP15.31■□□□□ 0.04
CHD4-201ENST00000357008 PDIA6Q15084 440 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 NTRK3Q16288 839 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 CYP51A1Q16850 503 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 STK32AQ8WU08 396 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 OXNAD1Q96HP4 312 aaPredicted RBP15.31■□□□□ 0.04
CHD4-201ENST00000357008 AGXT2Q9BYV1 514 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms