RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 NCKAP1Q9Y2A7 1128 aa17.81■□□□□ 0.44
COL27A1-201ENST00000356083 C17orf102A2RUQ5 167 aa17.81■□□□□ 0.44
COL27A1-201ENST00000356083 GUCY1B2O75343 617 aa17.81■□□□□ 0.44
COL27A1-201ENST00000356083 VTNP04004 478 aa17.81■□□□□ 0.44
COL27A1-201ENST00000356083 DENND5BQ6ZUT9 1274 aa17.81■□□□□ 0.44
COL27A1-201ENST00000356083 CASP10Q92851 521 aa17.81■□□□□ 0.44
COL27A1-201ENST00000356083 GFM2Q969S9 779 aaKnown RBP17.81■□□□□ 0.44
COL27A1-201ENST00000356083 CCDC134Q9H6E4 229 aa17.81■□□□□ 0.44
COL27A1-201ENST00000356083 IFNA16P05015 189 aa17.8■□□□□ 0.44
COL27A1-201ENST00000356083 CDC42EP1Q00587 391 aa17.8■□□□□ 0.44
COL27A1-201ENST00000356083 AMPD2Q01433 879 aa17.8■□□□□ 0.44
COL27A1-201ENST00000356083 MDM1Q8TC05 714 aa17.8■□□□□ 0.44
COL27A1-201ENST00000356083 PGLYRP2Q96PD5 576 aa17.8■□□□□ 0.44
COL27A1-201ENST00000356083 EPC1Q9H2F5 836 aa17.8■□□□□ 0.44
COL27A1-201ENST00000356083 PAICSP22234 425 aaKnown RBP17.8■□□□□ 0.44
COL27A1-201ENST00000356083 EPC2Q52LR7 807 aa17.8■□□□□ 0.44
COL27A1-201ENST00000356083 FGD3Q5JSP0 725 aa17.8■□□□□ 0.44
COL27A1-201ENST00000356083 PROSER1Q86XN7 944 aa17.8■□□□□ 0.44
COL27A1-201ENST00000356083 PALB2Q86YC2 1186 aa17.8■□□□□ 0.44
COL27A1-201ENST00000356083 ZMYND8Q9ULU4 1186 aaPredicted RBP17.8■□□□□ 0.44
COL27A1-201ENST00000356083 IL6P05231 212 aa17.8■□□□□ 0.44
COL27A1-201ENST00000356083 PEG10Q86TG7 708 aaKnown RBP17.8■□□□□ 0.44
COL27A1-201ENST00000356083 GPRC5AQ8NFJ5 357 aa17.8■□□□□ 0.44
COL27A1-201ENST00000356083 GGA3Q9NZ52 723 aa17.8■□□□□ 0.44
COL27A1-201ENST00000356083 RGS12O14924 1447 aa17.8■□□□□ 0.44
COL27A1-201ENST00000356083 AMD1P17707 334 aa17.8■□□□□ 0.44
COL27A1-201ENST00000356083 ACO1P21399 889 aaKnown RBP17.8■□□□□ 0.44
COL27A1-201ENST00000356083 DENND1BQ6P3S1 775 aa17.8■□□□□ 0.44
COL27A1-201ENST00000356083 PARGQ86W56 976 aa17.8■□□□□ 0.44
COL27A1-201ENST00000356083 LRRC49Q8IUZ0 686 aa17.8■□□□□ 0.44
COL27A1-201ENST00000356083 APOL2Q9BQE5 337 aa17.8■□□□□ 0.44
COL27A1-201ENST00000356083 ZNF500O60304 480 aaPredicted RBP17.8■□□□□ 0.44
COL27A1-201ENST00000356083 PDHA2P29803 388 aa17.8■□□□□ 0.44
COL27A1-201ENST00000356083 KIF24Q5T7B8 1368 aa17.8■□□□□ 0.44
COL27A1-201ENST00000356083 IDH3BO43837 385 aa17.8■□□□□ 0.44
COL27A1-201ENST00000356083 PNMA6AP0CW24 399 aaPredicted RBP17.8■□□□□ 0.44
COL27A1-201ENST00000356083 VAV1P15498 845 aa17.8■□□□□ 0.44
COL27A1-201ENST00000356083 IL2P60568 153 aa17.8■□□□□ 0.44
COL27A1-201ENST00000356083 SNRNP35Q16560 246 aaKnown RBP17.8■□□□□ 0.44
COL27A1-201ENST00000356083 BMP10O95393 424 aa17.79■□□□□ 0.44
COL27A1-201ENST00000356083 ORC2Q13416 577 aaPredicted RBP17.79■□□□□ 0.44
COL27A1-201ENST00000356083 TRIQKQ629K1 86 aa17.79■□□□□ 0.44
COL27A1-201ENST00000356083 FAM171BQ6P995 826 aa17.79■□□□□ 0.44
COL27A1-201ENST00000356083 ATP10BO94823 1461 aa17.79■□□□□ 0.44
COL27A1-201ENST00000356083 BYSLQ13895 437 aaKnown RBP17.79■□□□□ 0.44
COL27A1-201ENST00000356083 CBWD3Q5JTY5 395 aa17.79■□□□□ 0.44
COL27A1-201ENST00000356083 CBWD5Q5RIA9 395 aa17.79■□□□□ 0.44
COL27A1-201ENST00000356083 RPTNQ6XPR3 784 aa17.79■□□□□ 0.44
COL27A1-201ENST00000356083 EFL1Q7Z2Z2 1120 aaKnown RBP17.79■□□□□ 0.44
COL27A1-201ENST00000356083 SPATA21Q7Z572 469 aa17.79■□□□□ 0.44
COL27A1-201ENST00000356083 MYO1HQ8N1T3 1032 aa17.79■□□□□ 0.44
COL27A1-201ENST00000356083 CALR3Q96L12 384 aaKnown RBP17.79■□□□□ 0.44
COL27A1-201ENST00000356083 PRKAG1P54619 331 aa17.79■□□□□ 0.44
COL27A1-201ENST00000356083 KIF2BQ8N4N8 673 aa17.79■□□□□ 0.44
COL27A1-201ENST00000356083 CYP4Z2PQ8N1L4 340 aa17.79■□□□□ 0.44
COL27A1-201ENST00000356083 RMND5AQ9H871 391 aa17.79■□□□□ 0.44
COL27A1-201ENST00000356083 CTNNAL1Q9UBT7 734 aa17.79■□□□□ 0.44
COL27A1-201ENST00000356083 GCC2Q8IWJ2 1684 aa17.79■□□□□ 0.44
COL27A1-201ENST00000356083 STAT4Q14765 748 aa17.79■□□□□ 0.44
COL27A1-201ENST00000356083 LLGL2Q6P1M3 1020 aa17.79■□□□□ 0.44
COL27A1-201ENST00000356083 CBWD2Q8IUF1 395 aa17.79■□□□□ 0.44
COL27A1-201ENST00000356083 SPPL2AQ8TCT8 520 aa17.79■□□□□ 0.44
COL27A1-201ENST00000356083 EMILIN2Q9BXX0 1053 aa17.79■□□□□ 0.44
COL27A1-201ENST00000356083 TRIT1Q9H3H1 467 aaKnown RBP17.79■□□□□ 0.44
COL27A1-201ENST00000356083 NT5MQ9NPB1 228 aa17.79■□□□□ 0.44
COL27A1-201ENST00000356083 JAK1P23458 1154 aa17.79■□□□□ 0.44
COL27A1-201ENST00000356083 MAGEA10P43363 369 aaPredicted RBP17.79■□□□□ 0.44
COL27A1-201ENST00000356083 CCT8P50990 548 aa17.79■□□□□ 0.44
COL27A1-201ENST00000356083 XRCC4Q13426 336 aa17.79■□□□□ 0.44
COL27A1-201ENST00000356083 BOP1Q14137 746 aaKnown RBP17.79■□□□□ 0.44
COL27A1-201ENST00000356083 FBXO38Q6PIJ6 1188 aa17.79■□□□□ 0.44
COL27A1-201ENST00000356083 ADAM30Q9UKF2 790 aa17.79■□□□□ 0.44
COL27A1-201ENST00000356083 B2RBV5 119 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 H7C4K7 107 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 ACADSBP45954 432 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 UBAP1Q9NZ09 502 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 SAE1Q9UBE0 346 aaPredicted RBP17.78■□□□□ 0.44
COL27A1-201ENST00000356083 AFF2P51816 1311 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 CCDC85CA6NKD9 419 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 AP3M2P53677 418 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 RBBP8NLQ8NC74 664 aaPredicted RBP17.78■□□□□ 0.44
COL27A1-201ENST00000356083 GRAMD1AQ96CP6 724 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 CLEC4MQ9H2X3 399 aaPredicted RBP17.78■□□□□ 0.44
COL27A1-201ENST00000356083 PPP2R3BQ9Y5P8 575 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 CRYMQ14894 314 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 ARSJQ5FYB0 599 aaPredicted RBP17.78■□□□□ 0.44
COL27A1-201ENST00000356083 HPS6Q86YV9 775 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 TSPAN14Q8NG11 270 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 PPP1R2P1Q96PQ5 205 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 ADGRE3Q9BY15 652 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 POLR1BQ9H9Y6 1135 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 SMPD4Q9NXE4 827 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 HERC5Q9UII4 1024 aaKnown RBP17.78■□□□□ 0.44
COL27A1-201ENST00000356083 CDY2AQ9Y6F7 541 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 CDY1Q9Y6F8 540 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 PRODHO43272 600 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 CHN1P15882 459 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 GPD1P21695 349 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 TCEA1P23193 301 aaKnown RBP17.78■□□□□ 0.44
COL27A1-201ENST00000356083 MAGEA9P43362 315 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms