RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 FRMD8Q9BZ67 464 aaPredicted RBP23.24■■□□□ 1.31
NKX2-1-201ENST00000354822 HESX1Q9UBX0 185 aa23.24■■□□□ 1.31
NKX2-1-201ENST00000354822 CITO14578 2027 aa23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 CFAP69A5D8W1 941 aa23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 TYROBPO43914 113 aa23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 MMP3P08254 477 aa23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 TGM2P21980 687 aa23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 CA4P22748 312 aa23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 SSTR1P30872 391 aa23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 YARSP54577 528 aaKnown RBP23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 MMRN1Q13201 1228 aa23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 ZKSCAN8Q15776 578 aaPredicted RBP23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 C15orf59Q2T9L4 293 aaPredicted RBP23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 CCDC14Q49A88 953 aa23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 FAM133BQ5BKY9 247 aaKnown RBP23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 PPP1R26Q5T8A7 1209 aaPredicted RBP23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 SH3PXD2AQ5TCZ1 1133 aa23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 TRNP1Q6NT89 227 aa23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 DPP9Q86TI2 863 aa23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 UNC93AQ86WB7 457 aa23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 PARP9Q8IXQ6 854 aa23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 C12orf29Q8N999 325 aa23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 ALKBH8Q96BT7 664 aaKnown RBP23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 GCOM2Q9BZD3 368 aaPredicted RBP23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 ZWINTO95229 277 aa23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 SDC4P31431 198 aa23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 MSH2P43246 934 aa23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 PDK4Q16654 411 aa23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 SLC27A1Q6PCB7 646 aa23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 OLFML1Q6UWY5 402 aa23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 SESTD1Q86VW0 696 aa23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 BEST2Q8NFU1 509 aa23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 FBF1Q8TES7 1133 aa23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 SLC35F5Q8WV83 523 aa23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 PAK5Q9P286 719 aa23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 SNX9Q9Y5X1 595 aa23.23■■□□□ 1.31
NKX2-1-201ENST00000354822 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.22■■□□□ 1.31
NKX2-1-201ENST00000354822 CHADO15335 359 aa23.22■■□□□ 1.31
NKX2-1-201ENST00000354822 BANF1O75531 89 aa23.22■■□□□ 1.31
NKX2-1-201ENST00000354822 SPAG6O75602 509 aa23.22■■□□□ 1.31
NKX2-1-201ENST00000354822 TMEM63AO94886 807 aa23.22■■□□□ 1.31
NKX2-1-201ENST00000354822 UBOX5O94941 541 aa23.22■■□□□ 1.31
NKX2-1-201ENST00000354822 NPTXRO95502 500 aa23.22■■□□□ 1.31
NKX2-1-201ENST00000354822 GAD2Q05329 585 aa23.22■■□□□ 1.31
NKX2-1-201ENST00000354822 ZBTB6Q15916 424 aa23.22■■□□□ 1.31
NKX2-1-201ENST00000354822 BBS9Q3SYG4 887 aa23.22■■□□□ 1.31
NKX2-1-201ENST00000354822 IQSEC1Q6DN90 963 aa23.22■■□□□ 1.31
NKX2-1-201ENST00000354822 PMF1Q6P1K2 205 aa23.22■■□□□ 1.31
NKX2-1-201ENST00000354822 ABHD16BQ9H3Z7 469 aa23.22■■□□□ 1.31
NKX2-1-201ENST00000354822 TCRBV7S3A2A0A539 114 aa23.21■■□□□ 1.31
NKX2-1-201ENST00000354822 ZNF487B1APH4 448 aa23.21■■□□□ 1.31
NKX2-1-201ENST00000354822 H7C0C1 242 aa23.21■■□□□ 1.31
NKX2-1-201ENST00000354822 SMPD1P17405 629 aa23.21■■□□□ 1.31
NKX2-1-201ENST00000354822 RPA3P35244 121 aaPredicted RBP23.21■■□□□ 1.31
NKX2-1-201ENST00000354822 ATP5OP48047 213 aa23.21■■□□□ 1.31
NKX2-1-201ENST00000354822 CCDC15Q0P6D6 951 aa23.21■■□□□ 1.31
NKX2-1-201ENST00000354822 BNIP1Q12981 228 aa23.21■■□□□ 1.31
NKX2-1-201ENST00000354822 CDO1Q16878 200 aa23.21■■□□□ 1.31
NKX2-1-201ENST00000354822 ZC3H18Q86VM9 953 aaKnown RBP23.21■■□□□ 1.31
NKX2-1-201ENST00000354822 C4orf33Q8N1A6 199 aa23.21■■□□□ 1.31
NKX2-1-201ENST00000354822 OR6J1Q8NGC5 347 aa23.21■■□□□ 1.31
NKX2-1-201ENST00000354822 SNX27Q96L92 541 aa23.21■■□□□ 1.31
NKX2-1-201ENST00000354822 CYTH2Q99418 400 aa23.21■■□□□ 1.31
NKX2-1-201ENST00000354822 MRPL45Q9BRJ2 306 aaKnown RBP23.21■■□□□ 1.31
NKX2-1-201ENST00000354822 ADAMTS10Q9H324 1103 aa23.21■■□□□ 1.31
NKX2-1-201ENST00000354822 PIK3R2O00459 728 aa23.21■■□□□ 1.31
NKX2-1-201ENST00000354822 CHUKO15111 745 aa23.21■■□□□ 1.31
NKX2-1-201ENST00000354822 HOXA11P31270 313 aaPredicted RBP23.21■■□□□ 1.31
NKX2-1-201ENST00000354822 RGS7P49802 495 aa23.21■■□□□ 1.31
NKX2-1-201ENST00000354822 SNCBQ16143 134 aa23.21■■□□□ 1.31
NKX2-1-201ENST00000354822 HHATQ5VTY9 493 aa23.21■■□□□ 1.31
NKX2-1-201ENST00000354822 ACOT1Q86TX2 421 aa23.21■■□□□ 1.31
NKX2-1-201ENST00000354822 PLD5Q8N7P1 536 aa23.21■■□□□ 1.31
NKX2-1-201ENST00000354822 RTP4Q96DX8 246 aa23.21■■□□□ 1.31
NKX2-1-201ENST00000354822 PAFAH2Q99487 392 aa23.21■■□□□ 1.31
NKX2-1-201ENST00000354822 SNTG2Q9NY99 539 aa23.21■■□□□ 1.31
NKX2-1-201ENST00000354822 APOL1O14791 398 aa23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 MDM4O15151 490 aa23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 MGRN1O60291 552 aa23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 GRAP2O75791 330 aa23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 KRT4P19013 534 aa23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 SWT1Q5T5J6 900 aaKnown RBP23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 ARHGAP17Q68EM7 881 aa23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 CGB2Q6NT52 195 aa23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 SCYL2Q6P3W7 929 aa23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 NPNTQ6UXI9 565 aa23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 C4orf22Q6V702 233 aa23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 CATSPER4Q7RTX7 472 aa23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 TTC30AQ86WT1 665 aa23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 LRRC8CQ8TDW0 803 aa23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 MRRFQ96E11 262 aaKnown RBP23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 DNAI2Q9GZS0 605 aa23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 KIF9Q9HAQ2 790 aa23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 A0A1W2PPM1 405 aa23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 IL4RP24394 825 aa23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 BCAR1P56945 870 aa23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 ATP11AP98196 1134 aa23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 KCNJ11Q14654 390 aa23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 KIZQ2M2Z5 673 aa23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 NOTUMQ6P988 496 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms