RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 NDUFV2P19404 249 aa16.93■□□□□ 0.3
DDX55-202ENST00000354291 ITPKBP27987 946 aa16.93■□□□□ 0.3
DDX55-202ENST00000354291 GRIK1P39086 918 aa16.93■□□□□ 0.3
DDX55-202ENST00000354291 PNPLA4P41247 253 aa16.93■□□□□ 0.3
DDX55-202ENST00000354291 SLC12A3P55017 1021 aa16.93■□□□□ 0.3
DDX55-202ENST00000354291 USP46P62068 366 aa16.93■□□□□ 0.3
DDX55-202ENST00000354291 GAD2Q05329 585 aa16.93■□□□□ 0.3
DDX55-202ENST00000354291 ARSHQ5FYA8 562 aa16.93■□□□□ 0.3
DDX55-202ENST00000354291 LARP1BQ659C4 914 aaKnown RBP16.93■□□□□ 0.3
DDX55-202ENST00000354291 SDE2Q6IQ49 451 aa16.93■□□□□ 0.3
DDX55-202ENST00000354291 NUDT18Q6ZVK8 323 aa16.93■□□□□ 0.3
DDX55-202ENST00000354291 OSTM1Q86WC4 334 aa16.93■□□□□ 0.3
DDX55-202ENST00000354291 MIB1Q86YT6 1006 aa16.93■□□□□ 0.3
DDX55-202ENST00000354291 PHTF2Q8N3S3 785 aa16.93■□□□□ 0.3
DDX55-202ENST00000354291 GALNT15Q8N3T1 639 aa16.93■□□□□ 0.3
DDX55-202ENST00000354291 MIR1-1HGQ9H1L0 117 aa16.93■□□□□ 0.3
DDX55-202ENST00000354291 SLC6A17Q9H1V8 727 aa16.93■□□□□ 0.3
DDX55-202ENST00000354291 CD93Q9NPY3 652 aa16.93■□□□□ 0.3
DDX55-202ENST00000354291 TM7SF3Q9NS93 570 aa16.93■□□□□ 0.3
DDX55-202ENST00000354291 TOR4AQ9NXH8 423 aa16.93■□□□□ 0.3
DDX55-202ENST00000354291 DEC1Q9P2X7 70 aa16.93■□□□□ 0.3
DDX55-202ENST00000354291 MAGEC2Q9UBF1 373 aaPredicted RBP16.93■□□□□ 0.3
DDX55-202ENST00000354291 PLXND1Q9Y4D7 1925 aa16.93■□□□□ 0.3
DDX55-202ENST00000354291 A0A1B0GTW7 788 aa16.92■□□□□ 0.3
DDX55-202ENST00000354291 ZNF840PA6NDX5 716 aa16.92■□□□□ 0.3
DDX55-202ENST00000354291 TISP43B9A030 160 aa16.92■□□□□ 0.3
DDX55-202ENST00000354291 ATP2C2O75185 946 aa16.92■□□□□ 0.3
DDX55-202ENST00000354291 TULP3O75386 442 aa16.92■□□□□ 0.3
DDX55-202ENST00000354291 BDNFP23560 247 aa16.92■□□□□ 0.3
DDX55-202ENST00000354291 POLR2BP30876 1174 aaKnown RBP16.92■□□□□ 0.3
DDX55-202ENST00000354291 TFAMQ00059 246 aaKnown RBP16.92■□□□□ 0.3
DDX55-202ENST00000354291 CAMK2BQ13554 666 aa16.92■□□□□ 0.3
DDX55-202ENST00000354291 HYIQ5T013 277 aa16.92■□□□□ 0.3
DDX55-202ENST00000354291 DENND5BQ6ZUT9 1274 aa16.92■□□□□ 0.3
DDX55-202ENST00000354291 CHPFQ8IZ52 775 aa16.92■□□□□ 0.3
DDX55-202ENST00000354291 TMEM86AQ8N2M4 240 aa16.92■□□□□ 0.3
DDX55-202ENST00000354291 PDCD7Q8N8D1 485 aaKnown RBP16.92■□□□□ 0.3
DDX55-202ENST00000354291 IPO4Q8TEX9 1081 aaKnown RBP16.92■□□□□ 0.3
DDX55-202ENST00000354291 FUBP3Q96I24 572 aaKnown RBP eCLIP16.92■□□□□ 0.3
DDX55-202ENST00000354291 ACOX2Q99424 681 aa16.92■□□□□ 0.3
DDX55-202ENST00000354291 CDC6Q99741 560 aa16.92■□□□□ 0.3
DDX55-202ENST00000354291 ZHX3Q9H4I2 956 aa16.92■□□□□ 0.3
DDX55-202ENST00000354291 KCND2Q9NZV8 630 aa16.92■□□□□ 0.3
DDX55-202ENST00000354291 TBC1D14Q9P2M4 693 aa16.92■□□□□ 0.3
DDX55-202ENST00000354291 AGO2Q9UKV8 859 aaKnown RBP16.92■□□□□ 0.3
DDX55-202ENST00000354291 HCN2Q9UL51 889 aa16.92■□□□□ 0.3
DDX55-202ENST00000354291 HELZP42694 1942 aaKnown RBP16.92■□□□□ 0.3
DDX55-202ENST00000354291 TCHHQ07283 1943 aa16.92■□□□□ 0.3
DDX55-202ENST00000354291 ANAPC1Q9H1A4 1944 aa16.92■□□□□ 0.3
DDX55-202ENST00000354291 VWA3AA6NCI4 1184 aa16.91■□□□□ 0.3
DDX55-202ENST00000354291 MEI4A8MW99 385 aa16.91■□□□□ 0.3
DDX55-202ENST00000354291 TRIM24O15164 1050 aa16.91■□□□□ 0.3
DDX55-202ENST00000354291 CILPO75339 1184 aa16.91■□□□□ 0.3
DDX55-202ENST00000354291 FAM13AO94988 1023 aa16.91■□□□□ 0.3
DDX55-202ENST00000354291 ITGB3P05106 788 aa16.91■□□□□ 0.3
DDX55-202ENST00000354291 MBL2P11226 248 aaPredicted RBP16.91■□□□□ 0.3
DDX55-202ENST00000354291 PCSK1P29120 753 aa16.91■□□□□ 0.3
DDX55-202ENST00000354291 MAGEA11P43364 429 aa16.91■□□□□ 0.3
DDX55-202ENST00000354291 DHX8Q14562 1220 aaKnown RBP16.91■□□□□ 0.3
DDX55-202ENST00000354291 ANO4Q32M45 955 aa16.91■□□□□ 0.3
DDX55-202ENST00000354291 PREPLQ4J6C6 727 aaPredicted RBP16.91■□□□□ 0.3
DDX55-202ENST00000354291 KIAA1324Q6UXG2 1013 aaKnown RBP16.91■□□□□ 0.3
DDX55-202ENST00000354291 C4orf50Q6ZRC1 276 aa16.91■□□□□ 0.3
DDX55-202ENST00000354291 ZNF843Q8N446 348 aa16.91■□□□□ 0.3
DDX55-202ENST00000354291 ZCCHC9Q8N567 271 aaKnown RBP16.91■□□□□ 0.3
DDX55-202ENST00000354291 KIAA1958Q8N8K9 716 aa16.91■□□□□ 0.3
DDX55-202ENST00000354291 CDK5RAP3Q96JB5 506 aa16.91■□□□□ 0.3
DDX55-202ENST00000354291 SPATA17Q96L03 361 aa16.91■□□□□ 0.3
DDX55-202ENST00000354291 FNDC3AQ9Y2H6 1198 aaKnown RBP16.91■□□□□ 0.3
DDX55-202ENST00000354291 SNX9Q9Y5X1 595 aa16.91■□□□□ 0.3
DDX55-202ENST00000354291 MYH11P35749 1972 aa16.91■□□□□ 0.3
DDX55-202ENST00000354291 MYO18BQ8IUG5 2567 aa16.9■□□□□ 0.3
DDX55-202ENST00000354291 TRAK2O60296 914 aa16.9■□□□□ 0.3
DDX55-202ENST00000354291 CER1O95813 267 aa16.9■□□□□ 0.3
DDX55-202ENST00000354291 PLCG1P19174 1290 aa16.9■□□□□ 0.3
DDX55-202ENST00000354291 ANXA13P27216 316 aa16.9■□□□□ 0.3
DDX55-202ENST00000354291 MATKP42679 507 aa16.9■□□□□ 0.3
DDX55-202ENST00000354291 LHX1P48742 406 aa16.9■□□□□ 0.3
DDX55-202ENST00000354291 HLA-BQ31612 363 aa16.9■□□□□ 0.3
DDX55-202ENST00000354291 EGFLAMQ63HQ2 1017 aa16.9■□□□□ 0.3
DDX55-202ENST00000354291 SCARA3Q6AZY7 606 aa16.9■□□□□ 0.3
DDX55-202ENST00000354291 SLFN12LQ6IEE8 588 aa16.9■□□□□ 0.3
DDX55-202ENST00000354291 ADGRF2Q8IZF7 708 aa16.9■□□□□ 0.3
DDX55-202ENST00000354291 AK8Q96MA6 479 aa16.9■□□□□ 0.3
DDX55-202ENST00000354291 REEP2Q9BRK0 252 aa16.9■□□□□ 0.3
DDX55-202ENST00000354291 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.9■□□□□ 0.3
DDX55-202ENST00000354291 RAD54BQ9Y620 910 aa16.9■□□□□ 0.3
DDX55-202ENST00000354291 HECTD1Q9ULT8 2610 aa16.9■□□□□ 0.3
DDX55-202ENST00000354291 SLC26A4O43511 780 aa16.89■□□□□ 0.29
DDX55-202ENST00000354291 IL18RAPO95256 599 aa16.89■□□□□ 0.29
DDX55-202ENST00000354291 BMP15O95972 392 aa16.89■□□□□ 0.29
DDX55-202ENST00000354291 KRT19P08727 400 aa16.89■□□□□ 0.29
DDX55-202ENST00000354291 SCP2P22307 547 aa16.89■□□□□ 0.29
DDX55-202ENST00000354291 CD6P30203 668 aa16.89■□□□□ 0.29
DDX55-202ENST00000354291 PPP3CCP48454 512 aa16.89■□□□□ 0.29
DDX55-202ENST00000354291 PSMC1P62191 440 aaKnown RBP16.89■□□□□ 0.29
DDX55-202ENST00000354291 CYP27A1Q02318 531 aa16.89■□□□□ 0.29
DDX55-202ENST00000354291 IFRD2Q12894 506 aaPredicted RBP16.89■□□□□ 0.29
DDX55-202ENST00000354291 FAM171BQ6P995 826 aa16.89■□□□□ 0.29
DDX55-202ENST00000354291 VSTM1Q6UX27 236 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms