RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 CDH5P33151 784 aaPredicted RBP23.33■■□□□ 1.33
SHMT1-203ENST00000354098 TMEM35BQ8NCS4 154 aa23.33■■□□□ 1.33
SHMT1-203ENST00000354098 OR8K1Q8NGG5 319 aa23.33■■□□□ 1.33
SHMT1-203ENST00000354098 STK32AQ8WU08 396 aa23.33■■□□□ 1.33
SHMT1-203ENST00000354098 CPA5Q8WXQ8 436 aa23.33■■□□□ 1.33
SHMT1-203ENST00000354098 FGF13Q92913 245 aa23.33■■□□□ 1.33
SHMT1-203ENST00000354098 SLITRK1Q96PX8 696 aa23.33■■□□□ 1.33
SHMT1-203ENST00000354098 MYADMQ96S97 322 aa23.33■■□□□ 1.33
SHMT1-203ENST00000354098 CPXM1Q96SM3 734 aa23.33■■□□□ 1.33
SHMT1-203ENST00000354098 ULBP1Q9BZM6 244 aa23.33■■□□□ 1.33
SHMT1-203ENST00000354098 SEPT11Q9NVA2 429 aaKnown RBP23.33■■□□□ 1.33
SHMT1-203ENST00000354098 GMIPQ9P107 970 aa23.33■■□□□ 1.33
SHMT1-203ENST00000354098 SCML2Q9UQR0 700 aa23.33■■□□□ 1.33
SHMT1-203ENST00000354098 CEP83Q9Y592 693 aa23.33■■□□□ 1.33
SHMT1-203ENST00000354098 FGF19O95750 216 aa23.32■■□□□ 1.32
SHMT1-203ENST00000354098 CYP1A1P04798 512 aaPredicted RBP23.32■■□□□ 1.32
SHMT1-203ENST00000354098 PLEKP08567 350 aaPredicted RBP23.32■■□□□ 1.32
SHMT1-203ENST00000354098 NOMO3P69849 1222 aa23.32■■□□□ 1.32
SHMT1-203ENST00000354098 ARID5BQ14865 1188 aa23.32■■□□□ 1.32
SHMT1-203ENST00000354098 NAA35Q5VZE5 725 aa23.32■■□□□ 1.32
SHMT1-203ENST00000354098 WDR59Q6PJI9 974 aa23.32■■□□□ 1.32
SHMT1-203ENST00000354098 SCUBE3Q8IX30 993 aa23.32■■□□□ 1.32
SHMT1-203ENST00000354098 DRC7Q8IY82 874 aa23.32■■□□□ 1.32
SHMT1-203ENST00000354098 ASB2Q96Q27 587 aa23.32■■□□□ 1.32
SHMT1-203ENST00000354098 PHF7Q9BWX1 381 aaPredicted RBP23.32■■□□□ 1.32
SHMT1-203ENST00000354098 ABHD10Q9NUJ1 306 aa23.32■■□□□ 1.32
SHMT1-203ENST00000354098 FAM50BQ9Y247 325 aa23.32■■□□□ 1.32
SHMT1-203ENST00000354098 DENND4AQ7Z401 1863 aa23.32■■□□□ 1.32
SHMT1-203ENST00000354098 ZNF840PA6NDX5 716 aa23.32■■□□□ 1.32
SHMT1-203ENST00000354098 AKR1B15C9JRZ8 316 aaPredicted RBP23.32■■□□□ 1.32
SHMT1-203ENST00000354098 E5RJQ4 531 aa23.32■■□□□ 1.32
SHMT1-203ENST00000354098 ZBED1O96006 694 aa23.32■■□□□ 1.32
SHMT1-203ENST00000354098 CDC25BP30305 580 aa23.32■■□□□ 1.32
SHMT1-203ENST00000354098 HNRNPH3P31942 346 aaKnown RBP23.32■■□□□ 1.32
SHMT1-203ENST00000354098 TXNDC8Q6A555 127 aa23.32■■□□□ 1.32
SHMT1-203ENST00000354098 TMEM110Q86TL2 294 aa23.32■■□□□ 1.32
SHMT1-203ENST00000354098 NPAS3Q8IXF0 933 aa23.32■■□□□ 1.32
SHMT1-203ENST00000354098 SIX6OS1Q8N1H7 587 aa23.32■■□□□ 1.32
SHMT1-203ENST00000354098 CLEC4CQ8WTT0 213 aa23.32■■□□□ 1.32
SHMT1-203ENST00000354098 MCRS1Q96EZ8 462 aa23.32■■□□□ 1.32
SHMT1-203ENST00000354098 PPP1R13BQ96KQ4 1090 aa23.32■■□□□ 1.32
SHMT1-203ENST00000354098 ZSWIM3Q96MP5 696 aa23.32■■□□□ 1.32
SHMT1-203ENST00000354098 MIS12Q9H081 205 aa23.32■■□□□ 1.32
SHMT1-203ENST00000354098 TRPM5Q9NZQ8 1165 aa23.32■■□□□ 1.32
SHMT1-203ENST00000354098 ZNF638Q14966 1978 aaKnown RBP23.31■■□□□ 1.32
SHMT1-203ENST00000354098 LSM8O95777 96 aaKnown RBP23.31■■□□□ 1.32
SHMT1-203ENST00000354098 ABL1P00519 1130 aa23.31■■□□□ 1.32
SHMT1-203ENST00000354098 BMP1P13497 986 aa23.31■■□□□ 1.32
SHMT1-203ENST00000354098 TNFAIP3P21580 790 aa23.31■■□□□ 1.32
SHMT1-203ENST00000354098 GBP2P32456 591 aaPredicted RBP23.31■■□□□ 1.32
SHMT1-203ENST00000354098 PTPN20Q4JDL3 420 aa23.31■■□□□ 1.32
SHMT1-203ENST00000354098 TDRD12Q587J7 1177 aaKnown RBP23.31■■□□□ 1.32
SHMT1-203ENST00000354098 PM20D1Q6GTS8 502 aa23.31■■□□□ 1.32
SHMT1-203ENST00000354098 BHLHA9Q7RTU4 235 aa23.31■■□□□ 1.32
SHMT1-203ENST00000354098 CCDC186Q7Z3E2 898 aa23.31■■□□□ 1.32
SHMT1-203ENST00000354098 TC2NQ8N9U0 490 aa23.31■■□□□ 1.32
SHMT1-203ENST00000354098 SPC24Q8NBT2 197 aa23.31■■□□□ 1.32
SHMT1-203ENST00000354098 SLC30A5Q8TAD4 765 aa23.31■■□□□ 1.32
SHMT1-203ENST00000354098 RPGRIP1Q96KN7 1286 aa23.31■■□□□ 1.32
SHMT1-203ENST00000354098 GCNAQ96QF7 691 aa23.31■■□□□ 1.32
SHMT1-203ENST00000354098 NMUR1Q9HB89 426 aa23.31■■□□□ 1.32
SHMT1-203ENST00000354098 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.31■■□□□ 1.32
SHMT1-203ENST00000354098 ARHGAP20Q9P2F6 1191 aa23.31■■□□□ 1.32
SHMT1-203ENST00000354098 SERPING1P05155 500 aa23.3■■□□□ 1.32
SHMT1-203ENST00000354098 UNGP13051 313 aaPredicted RBP23.3■■□□□ 1.32
SHMT1-203ENST00000354098 CLEC16AQ2KHT3 1053 aa23.3■■□□□ 1.32
SHMT1-203ENST00000354098 C2CD6Q53TS8 623 aa23.3■■□□□ 1.32
SHMT1-203ENST00000354098 GPR158Q5T848 1215 aa23.3■■□□□ 1.32
SHMT1-203ENST00000354098 SCD5Q86SK9 330 aa23.3■■□□□ 1.32
SHMT1-203ENST00000354098 CNGA4Q8IV77 575 aa23.3■■□□□ 1.32
SHMT1-203ENST00000354098 OSER1Q9NX31 292 aa23.3■■□□□ 1.32
SHMT1-203ENST00000354098 CDH7Q9ULB5 785 aa23.3■■□□□ 1.32
SHMT1-203ENST00000354098 A0A1W2PQH9 124 aa23.29■■□□□ 1.32
SHMT1-203ENST00000354098 C2orf78A6NCI8 922 aa23.29■■□□□ 1.32
SHMT1-203ENST00000354098 PAPSS1O43252 624 aaPredicted RBP23.29■■□□□ 1.32
SHMT1-203ENST00000354098 ERBB2P04626 1255 aa23.29■■□□□ 1.32
SHMT1-203ENST00000354098 ZDHHC11BP0C7U3 371 aa23.29■■□□□ 1.32
SHMT1-203ENST00000354098 ACADSBP45954 432 aa23.29■■□□□ 1.32
SHMT1-203ENST00000354098 DAOAP59103 153 aa23.29■■□□□ 1.32
SHMT1-203ENST00000354098 TRIM72Q6ZMU5 477 aa23.29■■□□□ 1.32
SHMT1-203ENST00000354098 MAB21L3Q8N8X9 362 aa23.29■■□□□ 1.32
SHMT1-203ENST00000354098 PDZD8Q8NEN9 1154 aa23.29■■□□□ 1.32
SHMT1-203ENST00000354098 ST13P5Q8NFI4 369 aaPredicted RBP23.29■■□□□ 1.32
SHMT1-203ENST00000354098 OVCA2Q8WZ82 227 aa23.29■■□□□ 1.32
SHMT1-203ENST00000354098 MRPS31Q92665 395 aaKnown RBP23.29■■□□□ 1.32
SHMT1-203ENST00000354098 NOX5Q96PH1 765 aa23.29■■□□□ 1.32
SHMT1-203ENST00000354098 SLC46A2Q9BY10 475 aa23.29■■□□□ 1.32
SHMT1-203ENST00000354098 CNGB3Q9NQW8 809 aa23.29■■□□□ 1.32
SHMT1-203ENST00000354098 BZW2Q9Y6E2 419 aaKnown RBP23.29■■□□□ 1.32
SHMT1-203ENST00000354098 YJEFN3A6XGL0 299 aa23.28■■□□□ 1.32
SHMT1-203ENST00000354098 C2CD4DB7Z1M9 353 aa23.28■■□□□ 1.32
SHMT1-203ENST00000354098 E7ENQ6 273 aa23.28■■□□□ 1.32
SHMT1-203ENST00000354098 DDX3XO00571 662 aaKnown RBP eCLIP23.28■■□□□ 1.322e-14■■■■□ 24.5
SHMT1-203ENST00000354098 PPP3CCP48454 512 aa23.28■■□□□ 1.32
SHMT1-203ENST00000354098 ERICH1Q86X53 443 aa23.28■■□□□ 1.32
SHMT1-203ENST00000354098 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.28■■□□□ 1.32
SHMT1-203ENST00000354098 CYP2S1Q96SQ9 504 aa23.28■■□□□ 1.32
SHMT1-203ENST00000354098 SLITRK6Q9H5Y7 841 aa23.28■■□□□ 1.32
SHMT1-203ENST00000354098 TRPC7Q9HCX4 862 aa23.28■■□□□ 1.32
SHMT1-203ENST00000354098 CYLDQ9NQC7 956 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms