RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 PBKQ96KB5 322 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 KREMEN1Q96MU8 473 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 PPP1R16BQ96T49 567 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 PNKPQ96T60 521 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 MRPL4Q9BYD3 311 aaKnown RBP8.73□□□□□ -1.01
CD44-205ENST00000352818 NFKBIZQ9BYH8 718 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 ISCUQ9H1K1 167 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 CLMPQ9H6B4 373 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 ABCB6Q9NP58 842 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 RBM12Q9NTZ6 932 aaKnown RBP8.73□□□□□ -1.01
CD44-205ENST00000352818 MRPS17Q9Y2R5 130 aaKnown RBP8.73□□□□□ -1.01
CD44-205ENST00000352818 ASCC3Q8N3C0 2202 aaKnown RBP8.73□□□□□ -1.01
CD44-205ENST00000352818 MGAQ8IWI9 3026 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 MEIS3P2A8K0S8 358 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 C2CD2LO14523 706 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 MAP2K7O14733 419 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 GPR182O15218 404 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 ZNF185O15231 689 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 RTN2O75298 545 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 GPR32O75388 356 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 TOM1L1O75674 476 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 MTA2O94776 668 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 KIF4AO95239 1232 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 EFEMP2O95967 443 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 GLUD1P00367 558 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 C4BPAP04003 597 aaKnown RBP8.72□□□□□ -1.01
CD44-205ENST00000352818 TNFRSF8P28908 595 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 FAM193AP78312 1265 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 POU5F1Q01860 360 aaKnown RBP8.72□□□□□ -1.01
CD44-205ENST00000352818 MCL1Q07820 350 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 PRPF4BQ13523 1007 aaKnown RBP8.72□□□□□ -1.01
CD44-205ENST00000352818 TFDP1Q14186 410 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 SURF1Q15526 300 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 ENOX2Q16206 610 aaKnown RBP8.72□□□□□ -1.01
CD44-205ENST00000352818 KIZQ2M2Z5 673 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 MAP9Q49MG5 647 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 CFAP221Q4G0U5 840 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 CCDC181Q5TID7 509 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 C11orf63Q6NUN7 778 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 LILRA6Q6PI73 481 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 MTHFD1LQ6UB35 978 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 PCSK4Q6UW60 755 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 CRELD2Q6UXH1 353 aaPredicted RBP8.72□□□□□ -1.01
CD44-205ENST00000352818 MTSS1LQ765P7 747 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 GRASPQ7Z6J2 395 aaPredicted RBP8.72□□□□□ -1.01
CD44-205ENST00000352818 RAB44Q7Z6P3 723 aaPredicted RBP8.72□□□□□ -1.01
CD44-205ENST00000352818 ZNF677Q86XU0 584 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 ZNF280BQ86YH2 543 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 IFNLR1Q8IU57 520 aaPredicted RBP8.72□□□□□ -1.01
CD44-205ENST00000352818 BRSK2Q8IWQ3 736 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 SPATA4Q8NEY3 305 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 TAS1R2Q8TE23 839 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 COG1Q8WTW3 980 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 GAB3Q8WWW8 586 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 CTNNBL1Q8WYA6 563 aaPredicted RBP8.72□□□□□ -1.01
CD44-205ENST00000352818 TAF4BQ92750 862 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 CCDC127Q96BQ5 260 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 CAPZA3Q96KX2 299 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 FNBP1Q96RU3 617 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 RPS6KC1Q96S38 1066 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 OSMRQ99650 979 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 FAM213AQ9BRX8 229 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 MSTO1Q9BUK6 570 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 HAPLN2Q9GZV7 340 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 PIDD1Q9HB75 910 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 RXFP1Q9HBX9 757 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 TOPORSQ9NS56 1045 aaPredicted RBP8.72□□□□□ -1.01
CD44-205ENST00000352818 TBC1D13Q9NVG8 400 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 SUCLA2Q9P2R7 463 aaPredicted RBP8.72□□□□□ -1.01
CD44-205ENST00000352818 CNTNAP2Q9UHC6 1331 aa8.72□□□□□ -1.01
CD44-205ENST00000352818 ANK1P16157 1881 aa8.71□□□□□ -1.01
CD44-205ENST00000352818 A0A0U1RQF3 1178 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 ABLIM1O14639 778 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 OGTO15294 1046 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 TGM5O43548 720 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 FAM189A1O60320 539 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 CLSTN1O94985 981 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 C22orf31O95567 290 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 FTCDO95954 541 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 HLA-DRAP01903 254 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 EDN1P05305 212 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 PRKCBP05771 671 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 RHOXF2BP0C7M4 288 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 CHRNB2P17787 502 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 PROZP22891 400 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 PXNP49023 591 aaPredicted RBP8.71□□□□□ -1.02
CD44-205ENST00000352818 PDE6CP51160 858 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 NLRP11P59045 1033 aaKnown RBP8.71□□□□□ -1.02
CD44-205ENST00000352818 BPIFB4P59827 614 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 VSNL1P62760 191 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 SIM1P81133 766 aaPredicted RBP8.71□□□□□ -1.02
CD44-205ENST00000352818 CDR2Q01850 454 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 LAMTOR4Q0VGL1 99 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 RPS6KA1Q15418 735 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 FAM187BQ17R55 369 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 LONRF2Q1L5Z9 754 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 BEND6Q5SZJ8 279 aaPredicted RBP8.71□□□□□ -1.02
CD44-205ENST00000352818 PPP1R2P3Q6NXS1 205 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 PIP4P1Q86T03 277 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 NOP9Q86U38 636 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms