RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 DPYSL4O14531 572 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 RTN3O95197 1032 aaPredicted RBP12.64□□□□□ -0.39
SMAD9-201ENST00000350148 MDH1BQ5I0G3 518 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 KIAA0319LQ8IZA0 1049 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 SGSM3Q96HU1 749 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 FGFBP2Q9BYJ0 223 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 SCOCQ9UIL1 159 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 ADAMTS5Q9UNA0 930 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 HACD1B0YJ81 288 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 CHUKO15111 745 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 HARS2P49590 506 aaKnown RBP12.64□□□□□ -0.39
SMAD9-201ENST00000350148 FAM187BQ17R55 369 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 ACBD5Q5T8D3 534 aaPredicted RBP12.64□□□□□ -0.39
SMAD9-201ENST00000350148 RSPH1Q8WYR4 309 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 SEPT5Q99719 369 aaPredicted RBP12.64□□□□□ -0.39
SMAD9-201ENST00000350148 LBHD1Q9BQE6 289 aaPredicted RBP12.64□□□□□ -0.39
SMAD9-201ENST00000350148 FZD8Q9H461 694 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 DDIT4Q9NX09 232 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 LAMA4Q16363 1823 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 GMNCA6NCL1 334 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 DFFAO00273 331 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 GRAP2O75791 330 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 ATP5HO75947 161 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 NFICP08651 508 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 GHRP10912 638 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 HIRAP54198 1017 aaPredicted RBP12.64□□□□□ -0.39
SMAD9-201ENST00000350148 ERMARDQ5T6L9 678 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 POLNQ7Z5Q5 900 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 PPM1NQ8N819 430 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 PRG3Q9Y2Y8 225 aaPredicted RBP12.64□□□□□ -0.39
SMAD9-201ENST00000350148 PIK3R2O00459 728 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 GFAPP14136 432 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 ARF4P18085 180 aaPredicted RBP12.64□□□□□ -0.39
SMAD9-201ENST00000350148 PPM1FP49593 454 aaPredicted RBP12.64□□□□□ -0.39
SMAD9-201ENST00000350148 CREG2Q8IUH2 290 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 SLAIN1Q8ND83 568 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 GOLPH3Q9H4A6 298 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 DPP7Q9UHL4 492 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 AP4E1Q9UPM8 1137 aa12.64□□□□□ -0.39
SMAD9-201ENST00000350148 PRRG1O14668 218 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 ADCY6O43306 1168 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 ACO1P21399 889 aaKnown RBP12.63□□□□□ -0.39
SMAD9-201ENST00000350148 ETFBP38117 255 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 SLC11A2P49281 568 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 VCPP55072 806 aaKnown RBP12.63□□□□□ -0.39
SMAD9-201ENST00000350148 GRIK3Q13003 919 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 CRLF3Q8IUI8 442 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 SPDL1Q96EA4 605 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 ZNF512Q96ME7 567 aaPredicted RBP12.63□□□□□ -0.39
SMAD9-201ENST00000350148 OXCT2Q9BYC2 517 aaPredicted RBP12.63□□□□□ -0.39
SMAD9-201ENST00000350148 DCLK3Q9C098 648 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 CYLDQ9NQC7 956 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 FARP1Q9Y4F1 1045 aaPredicted RBP12.63□□□□□ -0.39
SMAD9-201ENST00000350148 TTC36A6NLP5 189 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 TPD52L2O43399 206 aaKnown RBP12.63□□□□□ -0.39
SMAD9-201ENST00000350148 AKAP5P24588 427 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 TKTL1P51854 596 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 MBTD1Q05BQ5 628 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 GRB14Q14449 540 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 RPS6KA2Q15349 733 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 RASSF3Q86WH2 238 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 LZTR1Q8N653 840 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 CALML6Q8TD86 181 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 NUF2Q9BZD4 464 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 ZC3H7BQ9UGR2 993 aaKnown RBP12.63□□□□□ -0.39
SMAD9-201ENST00000350148 L1RE1Q9UN81 338 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 COL24A1Q17RW2 1714 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 GOLGA8MH3BSY2 632 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 TULP2O00295 520 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 NOL4O94818 638 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 FAM163BP0C2L3 166 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 YWHAZP63104 245 aaKnown RBP12.63□□□□□ -0.39
SMAD9-201ENST00000350148 NOMO3P69849 1222 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 EEF1DP3Q658K8 133 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 GRAMD4Q6IC98 578 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 TTC8Q8TAM2 541 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 BTBD6Q96KE9 485 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 SENP8Q96LD8 212 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 SHOC2Q9UQ13 582 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 SEPT4O43236 478 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 SMPD1P17405 629 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 FLT3LGP49771 235 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 LDLRAD1Q5T700 205 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 CXCL17Q6UXB2 119 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 CRYGNQ8WXF5 182 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 USP13Q92995 863 aaPredicted RBP12.63□□□□□ -0.39
SMAD9-201ENST00000350148 TRIM55Q9BYV6 548 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 CD248Q9HCU0 757 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 ABI2Q9NYB9 513 aaPredicted RBP12.63□□□□□ -0.39
SMAD9-201ENST00000350148 SMARCAL1Q9NZC9 954 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 MAGED2Q9UNF1 606 aaPredicted RBP12.63□□□□□ -0.39
SMAD9-201ENST00000350148 MYH6P13533 1939 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 C22orf31O95567 290 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 GSTA1P08263 222 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 GSTA2P09210 222 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 PRKAR2AP13861 404 aaKnown RBP12.63□□□□□ -0.39
SMAD9-201ENST00000350148 SAT1P21673 171 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 FGFR4P22455 802 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 GEMP55040 296 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 HADHBP55084 474 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms