RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 PTDSS1P48651 473 aaKnown RBP18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 RGS7P49802 495 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 CCNG1P51959 295 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 ROR1Q01973 937 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 TRPM4Q8TD43 1214 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 FNIP1Q8TF40 1166 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 SLC44A1Q8WWI5 657 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 RXFP2Q8WXD0 754 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 PLAC1Q9HBJ0 212 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 USP29Q9HBJ7 922 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 TRAFD1O14545 582 aaPredicted RBP18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 CYB561D2O14569 222 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 TM9SF1O15321 606 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 B4GALT4O60513 344 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 NEBLO76041 1014 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 INHBAP08476 426 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 PROZP22891 400 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 NEK3P51956 506 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 ZBTB16Q05516 673 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 BMPR2Q13873 1038 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 JADE1Q6IE81 842 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 RINLQ6ZS11 566 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 SLC13A1Q9BZW2 595 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 PPCSQ9HAB8 311 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 NR2E3Q9Y5X4 410 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 IKBKGQ9Y6K9 419 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 DLDP09622 509 aaKnown RBP18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 PDGFRAP16234 1089 aa18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 IGBP1P78318 339 aa18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 METTL7BQ6UX53 244 aa18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 TSHZ1Q6ZSZ6 1077 aa18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 ALYREFQ86V81 257 aaKnown RBP18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 BCO2Q9BYV7 579 aa18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 SMYD2Q9NRG4 433 aa18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 FETUBQ9UGM5 382 aa18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 TRIM49D1C9J1S8 452 aa18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 ACKR2O00590 384 aa18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 KCNN4O15554 427 aa18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 MED7O43513 233 aa18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 HAUS5O94927 633 aa18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 TOP3BO95985 862 aaKnown RBP18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 DHRS4L1P0CG22 281 aa18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 IL4RP24394 825 aa18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 RBL1P28749 1068 aa18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 RASSF2P50749 326 aa18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 KCNJ11Q14654 390 aa18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 PRKD1Q15139 912 aaPredicted RBP18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 HSF5Q4G112 596 aaPredicted RBP18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 OR6B2Q6IFH4 312 aa18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 C4orf50Q6ZRC1 276 aa18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 SPDL1Q96EA4 605 aa18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 PTCD3Q96EY7 689 aaKnown RBP18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 MCRS1Q96EZ8 462 aa18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 TMEM176AQ96HP8 235 aa18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 RPF1Q9H9Y2 349 aaKnown RBP18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 SLC24A3Q9HC58 644 aa18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 LRRC42Q9Y546 428 aa18.86■□□□□ 0.61
PTP4A3-202ENST00000349124 MYL2P10916 166 aa18.85■□□□□ 0.61
PTP4A3-202ENST00000349124 NOMO1Q15155 1222 aa18.85■□□□□ 0.61
PTP4A3-202ENST00000349124 CA9Q16790 459 aa18.85■□□□□ 0.61
PTP4A3-202ENST00000349124 PARP14Q460N5 1801 aa18.85■□□□□ 0.61
PTP4A3-202ENST00000349124 GPR20Q99678 358 aa18.85■□□□□ 0.61
PTP4A3-202ENST00000349124 PHIPQ8WWQ0 1821 aa18.85■□□□□ 0.61
PTP4A3-202ENST00000349124 CCDC195A0A1B0GUA6 201 aa18.85■□□□□ 0.61
PTP4A3-202ENST00000349124 GSC2O15499 205 aa18.85■□□□□ 0.61
PTP4A3-202ENST00000349124 C1QAP02745 245 aa18.85■□□□□ 0.61
PTP4A3-202ENST00000349124 HMGCRP04035 888 aa18.85■□□□□ 0.61
PTP4A3-202ENST00000349124 PDHA1P08559 390 aa18.85■□□□□ 0.61
PTP4A3-202ENST00000349124 SERPINB4P48594 390 aa18.85■□□□□ 0.61
PTP4A3-202ENST00000349124 MXD4Q14582 209 aaPredicted RBP18.85■□□□□ 0.61
PTP4A3-202ENST00000349124 DALRD3Q5D0E6 543 aaKnown RBP18.85■□□□□ 0.61
PTP4A3-202ENST00000349124 MDH1BQ5I0G3 518 aa18.85■□□□□ 0.61
PTP4A3-202ENST00000349124 EFCAB12Q6NXP0 572 aa18.85■□□□□ 0.61
PTP4A3-202ENST00000349124 LBX2Q6XYB7 198 aa18.85■□□□□ 0.61
PTP4A3-202ENST00000349124 DEFB132Q7Z7B7 95 aa18.85■□□□□ 0.61
PTP4A3-202ENST00000349124 CHST13Q8NET6 341 aa18.85■□□□□ 0.61
PTP4A3-202ENST00000349124 FBXO27Q8NI29 283 aa18.85■□□□□ 0.61
PTP4A3-202ENST00000349124 WDR60Q8WVS4 1066 aa18.85■□□□□ 0.61
PTP4A3-202ENST00000349124 CPB2Q96IY4 423 aa18.85■□□□□ 0.61
PTP4A3-202ENST00000349124 SRPK1Q96SB4 655 aaKnown RBP18.85■□□□□ 0.61
PTP4A3-202ENST00000349124 FZD8Q9H461 694 aa18.85■□□□□ 0.61
PTP4A3-202ENST00000349124 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.85■□□□□ 0.617e-6■■□□□ 11.9
PTP4A3-202ENST00000349124 IQANK1A0A1B0GTG1 560 aa18.84■□□□□ 0.61
PTP4A3-202ENST00000349124 F5H423 210 aaPredicted RBP18.84■□□□□ 0.61
PTP4A3-202ENST00000349124 CILPO75339 1184 aa18.84■□□□□ 0.61
PTP4A3-202ENST00000349124 KITP10721 976 aa18.84■□□□□ 0.61
PTP4A3-202ENST00000349124 KPNB1Q14974 876 aaKnown RBP18.84■□□□□ 0.61
PTP4A3-202ENST00000349124 PLD5Q8N7P1 536 aa18.84■□□□□ 0.61
PTP4A3-202ENST00000349124 CCDC110Q8TBZ0 833 aa18.84■□□□□ 0.61
PTP4A3-202ENST00000349124 APOPT1Q96IL0 206 aa18.84■□□□□ 0.61
PTP4A3-202ENST00000349124 BTBD10Q9BSF8 475 aa18.84■□□□□ 0.61
PTP4A3-202ENST00000349124 NMUR2Q9GZQ4 415 aa18.84■□□□□ 0.61
PTP4A3-202ENST00000349124 TLE6Q9H808 572 aa18.84■□□□□ 0.61
PTP4A3-202ENST00000349124 RSAD1Q9HA92 442 aa18.84■□□□□ 0.61
PTP4A3-202ENST00000349124 SAR1AQ9NR31 198 aa18.84■□□□□ 0.61
PTP4A3-202ENST00000349124 TAS2R1Q9NYW7 299 aa18.84■□□□□ 0.61
PTP4A3-202ENST00000349124 LNPEPQ9UIQ6 1025 aa18.84■□□□□ 0.61
PTP4A3-202ENST00000349124 NOP56O00567 594 aaKnown RBP18.84■□□□□ 0.61
PTP4A3-202ENST00000349124 KRT36O76013 467 aa18.84■□□□□ 0.61
PTP4A3-202ENST00000349124 APRTP07741 180 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms