RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 SELENOSQ9BQE4 189 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 B3GNT5Q9BYG0 378 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 SPC25Q9HBM1 224 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 SAYSD1Q9NPB0 183 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 FARP1Q9Y4F1 1045 aaPredicted RBP21.29■■□□□ 1
CHRNA3-202ENST00000348639 MCF2LO15068 1137 aa21.28■■□□□ 1
CHRNA3-202ENST00000348639 HUS1O60921 280 aa21.28■■□□□ 1
CHRNA3-202ENST00000348639 CHN1P15882 459 aa21.28■■□□□ 1
CHRNA3-202ENST00000348639 LRPAP1P30533 357 aa21.28■■□□□ 1
CHRNA3-202ENST00000348639 TRIM32Q13049 653 aa21.28■■□□□ 1
CHRNA3-202ENST00000348639 ERMARDQ5T6L9 678 aa21.28■■□□□ 1
CHRNA3-202ENST00000348639 PRCCQ92733 491 aaPredicted RBP21.28■■□□□ 1
CHRNA3-202ENST00000348639 TTC25Q96NG3 672 aa21.28■■□□□ 1
CHRNA3-202ENST00000348639 CCDC77Q9BR77 488 aa21.28■■□□□ 1
CHRNA3-202ENST00000348639 NGRNQ9NPE2 291 aaKnown RBP21.28■■□□□ 1
CHRNA3-202ENST00000348639 GTF2IRD1Q9UHL9 959 aa21.28■■□□□ 1
CHRNA3-202ENST00000348639 RRP15Q9Y3B9 282 aaKnown RBP21.28■■□□□ 1
CHRNA3-202ENST00000348639 CDY2AQ9Y6F7 541 aa21.28■■□□□ 1
CHRNA3-202ENST00000348639 PTGESO14684 152 aa21.28■■□□□ 1
CHRNA3-202ENST00000348639 CAPN15O75808 1086 aa21.28■■□□□ 1
CHRNA3-202ENST00000348639 CTSHP09668 335 aa21.28■■□□□ 1
CHRNA3-202ENST00000348639 ADORA2BP29275 332 aa21.28■■□□□ 1
CHRNA3-202ENST00000348639 GDF6Q6KF10 455 aaPredicted RBP21.28■■□□□ 1
CHRNA3-202ENST00000348639 B4GALNT4Q76KP1 1039 aa21.28■■□□□ 1
CHRNA3-202ENST00000348639 ARCQ7LC44 396 aa21.28■■□□□ 1
CHRNA3-202ENST00000348639 EXOC3L1Q86VI1 746 aa21.28■■□□□ 1
CHRNA3-202ENST00000348639 ADGRF2Q8IZF7 708 aa21.28■■□□□ 1
CHRNA3-202ENST00000348639 TOP6BLQ8N6T0 577 aa21.28■■□□□ 1
CHRNA3-202ENST00000348639 SPATA18Q8TC71 538 aa21.28■■□□□ 1
CHRNA3-202ENST00000348639 TNIP3Q96KP6 325 aa21.28■■□□□ 1
CHRNA3-202ENST00000348639 RNF157Q96PX1 679 aa21.28■■□□□ 1
CHRNA3-202ENST00000348639 XPO6Q96QU8 1125 aaKnown RBP21.28■■□□□ 1
CHRNA3-202ENST00000348639 C10orf88Q9H8K7 445 aa21.28■■□□□ 1
CHRNA3-202ENST00000348639 RARBP10826 455 aa21.27■■□□□ 1
CHRNA3-202ENST00000348639 WARSP23381 471 aaKnown RBP21.27■■□□□ 1
CHRNA3-202ENST00000348639 PTPN9P43378 593 aa21.27■■□□□ 1
CHRNA3-202ENST00000348639 ACADSBP45954 432 aa21.27■■□□□ 1
CHRNA3-202ENST00000348639 CTCFP49711 727 aaPredicted RBP21.27■■□□□ 1
CHRNA3-202ENST00000348639 PRKCZQ05513 592 aa21.27■■□□□ 1
CHRNA3-202ENST00000348639 KRT81Q14533 505 aa21.27■■□□□ 1
CHRNA3-202ENST00000348639 NOMO1Q15155 1222 aa21.27■■□□□ 1
CHRNA3-202ENST00000348639 SCYL2Q6P3W7 929 aa21.27■■□□□ 1
CHRNA3-202ENST00000348639 SLC26A9Q7LBE3 791 aa21.27■■□□□ 1
CHRNA3-202ENST00000348639 VSIG1Q86XK7 387 aa21.27■■□□□ 1
CHRNA3-202ENST00000348639 UNC45BQ8IWX7 931 aa21.27■■□□□ 1
CHRNA3-202ENST00000348639 PPP1R10Q96QC0 940 aaKnown RBP21.27■■□□□ 1
CHRNA3-202ENST00000348639 LGALS13Q9UHV8 139 aa21.27■■□□□ 1
CHRNA3-202ENST00000348639 TRPV2Q9Y5S1 764 aa21.27■■□□□ 1
CHRNA3-202ENST00000348639 ALOX15BO15296 676 aa21.26■□□□□ 0.99
CHRNA3-202ENST00000348639 RBP3P10745 1247 aa21.26■□□□□ 0.99
CHRNA3-202ENST00000348639 RDXP35241 583 aaKnown RBP21.26■□□□□ 0.99
CHRNA3-202ENST00000348639 RPL22P35268 128 aaKnown RBP21.26■□□□□ 0.99
CHRNA3-202ENST00000348639 CENPUQ71F23 418 aa21.26■□□□□ 0.99
CHRNA3-202ENST00000348639 PPIL6Q8IXY8 311 aa21.26■□□□□ 0.99
CHRNA3-202ENST00000348639 P3H4Q92791 437 aa21.26■□□□□ 0.99
CHRNA3-202ENST00000348639 ARHGEF2Q92974 986 aaKnown RBP21.26■□□□□ 0.99
CHRNA3-202ENST00000348639 HSFY1Q96LI6 401 aa21.26■□□□□ 0.99
CHRNA3-202ENST00000348639 ZFP42Q96MM3 310 aa21.26■□□□□ 0.99
CHRNA3-202ENST00000348639 PHACTR1Q9C0D0 580 aa21.26■□□□□ 0.99
CHRNA3-202ENST00000348639 BRCA2P51587 3418 aa21.26■□□□□ 0.99
CHRNA3-202ENST00000348639 A0A087WUV0 522 aaPredicted RBP21.26■□□□□ 0.99
CHRNA3-202ENST00000348639 MDM4O15151 490 aa21.26■□□□□ 0.99
CHRNA3-202ENST00000348639 CDH16O75309 829 aa21.26■□□□□ 0.99
CHRNA3-202ENST00000348639 FAM163BP0C2L3 166 aa21.26■□□□□ 0.99
CHRNA3-202ENST00000348639 IL4RP24394 825 aa21.26■□□□□ 0.99
CHRNA3-202ENST00000348639 STIP1P31948 543 aaKnown RBP21.26■□□□□ 0.99
CHRNA3-202ENST00000348639 CYP4F22Q6NT55 531 aa21.26■□□□□ 0.99
CHRNA3-202ENST00000348639 RSPH3Q86UC2 560 aa21.26■□□□□ 0.99
CHRNA3-202ENST00000348639 SLC2A14Q8TDB8 520 aa21.26■□□□□ 0.99
CHRNA3-202ENST00000348639 CPT1BQ92523 772 aa21.26■□□□□ 0.99
CHRNA3-202ENST00000348639 WNT8BQ93098 351 aa21.26■□□□□ 0.99
CHRNA3-202ENST00000348639 C11orf84Q9BUA3 381 aaPredicted RBP21.26■□□□□ 0.99
CHRNA3-202ENST00000348639 UPF3AQ9H1J1 476 aaKnown RBP21.26■□□□□ 0.99
CHRNA3-202ENST00000348639 CEP350Q5VT06 3117 aa21.25■□□□□ 0.99
CHRNA3-202ENST00000348639 HDAC4P56524 1084 aa21.25■□□□□ 0.99
CHRNA3-202ENST00000348639 CCDC38Q502W7 563 aa21.25■□□□□ 0.99
CHRNA3-202ENST00000348639 SPATS2Q86XZ4 545 aaKnown RBP21.25■□□□□ 0.99
CHRNA3-202ENST00000348639 NAT8LQ8N9F0 302 aa21.25■□□□□ 0.99
CHRNA3-202ENST00000348639 FAM71DQ8N9W8 422 aa21.25■□□□□ 0.99
CHRNA3-202ENST00000348639 B3GALNT2Q8NCR0 500 aa21.25■□□□□ 0.99
CHRNA3-202ENST00000348639 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.25■□□□□ 0.99
CHRNA3-202ENST00000348639 CLEC4CQ8WTT0 213 aa21.25■□□□□ 0.99
CHRNA3-202ENST00000348639 ATXN2LQ8WWM7 1075 aaKnown RBP21.25■□□□□ 0.99
CHRNA3-202ENST00000348639 CENPIQ92674 756 aaPredicted RBP21.25■□□□□ 0.99
CHRNA3-202ENST00000348639 SNRNP25Q9BV90 132 aaKnown RBP21.25■□□□□ 0.99
CHRNA3-202ENST00000348639 PCDH18Q9HCL0 1135 aa21.25■□□□□ 0.99
CHRNA3-202ENST00000348639 CTNNAL1Q9UBT7 734 aa21.25■□□□□ 0.99
CHRNA3-202ENST00000348639 ST3GAL5Q9UNP4 418 aa21.25■□□□□ 0.99
CHRNA3-202ENST00000348639 SMAPO00193 183 aa21.24■□□□□ 0.99
CHRNA3-202ENST00000348639 SEPT4O43236 478 aa21.24■□□□□ 0.99
CHRNA3-202ENST00000348639 ROR1Q01973 937 aa21.24■□□□□ 0.99
CHRNA3-202ENST00000348639 ZC3H12AQ5D1E8 599 aaKnown RBP21.24■□□□□ 0.99
CHRNA3-202ENST00000348639 NPNTQ6UXI9 565 aa21.24■□□□□ 0.99
CHRNA3-202ENST00000348639 OSTM1Q86WC4 334 aa21.24■□□□□ 0.99
CHRNA3-202ENST00000348639 INTS9Q9NV88 658 aaKnown RBP21.24■□□□□ 0.99
CHRNA3-202ENST00000348639 SCN10AQ9Y5Y9 1956 aa21.24■□□□□ 0.99
CHRNA3-202ENST00000348639 MEIS3P2A8K0S8 358 aa21.24■□□□□ 0.99
CHRNA3-202ENST00000348639 ZNF487B1APH4 448 aa21.24■□□□□ 0.99
CHRNA3-202ENST00000348639 LCP1P13796 627 aa21.24■□□□□ 0.99
CHRNA3-202ENST00000348639 CACNB2Q08289 660 aaPredicted RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms