RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 EXT2Q93063 718 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 PWWP2AQ96N64 755 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 PCDHB18PQ96TA0 734 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 FCHO1O14526 889 aa15.29■□□□□ 0.04
NUP50-201ENST00000347635 GJB6O95452 261 aa15.29■□□□□ 0.04
NUP50-201ENST00000347635 PNPLA4P41247 253 aa15.29■□□□□ 0.04
NUP50-201ENST00000347635 ELK3P41970 407 aa15.29■□□□□ 0.04
NUP50-201ENST00000347635 NLRP11P59045 1033 aaKnown RBP15.29■□□□□ 0.04
NUP50-201ENST00000347635 PDK4Q16654 411 aa15.29■□□□□ 0.04
NUP50-201ENST00000347635 GOLGA7BQ2TAP0 167 aa15.29■□□□□ 0.04
NUP50-201ENST00000347635 CHADLQ6NUI6 762 aa15.29■□□□□ 0.04
NUP50-201ENST00000347635 TMPRSS6Q8IU80 811 aa15.29■□□□□ 0.04
NUP50-201ENST00000347635 TSPYL2Q9H2G4 693 aaPredicted RBP15.29■□□□□ 0.04
NUP50-201ENST00000347635 E2F8A0AVK6 867 aa15.29■□□□□ 0.04
NUP50-201ENST00000347635 RASSF9O75901 435 aa15.29■□□□□ 0.04
NUP50-201ENST00000347635 SPRP35270 261 aaPredicted RBP15.29■□□□□ 0.04
NUP50-201ENST00000347635 PAPOLAP51003 745 aaKnown RBP15.29■□□□□ 0.04
NUP50-201ENST00000347635 MYL6P60660 151 aa15.29■□□□□ 0.04
NUP50-201ENST00000347635 PHEXP78562 749 aa15.29■□□□□ 0.04
NUP50-201ENST00000347635 FASTKD1Q53R41 847 aaKnown RBP15.29■□□□□ 0.04
NUP50-201ENST00000347635 TTC8Q8TAM2 541 aa15.29■□□□□ 0.04
NUP50-201ENST00000347635 SIX2Q9NPC8 291 aa15.29■□□□□ 0.04
NUP50-201ENST00000347635 ZCCHC18P0CG32 403 aa15.29■□□□□ 0.04
NUP50-201ENST00000347635 RFC1P35251 1148 aaPredicted RBP15.29■□□□□ 0.04
NUP50-201ENST00000347635 POU5F1BQ06416 359 aa15.29■□□□□ 0.04
NUP50-201ENST00000347635 ORC1Q13415 861 aa15.29■□□□□ 0.04
NUP50-201ENST00000347635 PDK2Q15119 407 aa15.29■□□□□ 0.04
NUP50-201ENST00000347635 LRRC74BQ6ZQY2 392 aa15.29■□□□□ 0.04
NUP50-201ENST00000347635 LRRC71Q8N4P6 559 aa15.29■□□□□ 0.04
NUP50-201ENST00000347635 SLITRK1Q96PX8 696 aa15.29■□□□□ 0.04
NUP50-201ENST00000347635 TMEM59LQ9UK28 342 aa15.29■□□□□ 0.04
NUP50-201ENST00000347635 C5orf60A6NFR6 353 aa15.29■□□□□ 0.04
NUP50-201ENST00000347635 GLTPD2A6NH11 291 aa15.29■□□□□ 0.04
NUP50-201ENST00000347635 TTC27Q6P3X3 843 aa15.29■□□□□ 0.04
NUP50-201ENST00000347635 PAPOLBQ9NRJ5 636 aaKnown RBP15.29■□□□□ 0.04
NUP50-201ENST00000347635 CPA4Q9UI42 421 aa15.29■□□□□ 0.04
NUP50-201ENST00000347635 SNX9Q9Y5X1 595 aa15.29■□□□□ 0.04
NUP50-201ENST00000347635 ENO3P13929 434 aaPredicted RBP15.28■□□□□ 0.04
NUP50-201ENST00000347635 ETS1P14921 441 aa15.28■□□□□ 0.04
NUP50-201ENST00000347635 CACNA2D1P54289 1103 aa15.28■□□□□ 0.04
NUP50-201ENST00000347635 EMC1Q8N766 993 aa15.28■□□□□ 0.04
NUP50-201ENST00000347635 AGAP3Q96P47 875 aa15.28■□□□□ 0.04
NUP50-201ENST00000347635 DCDC2Q9UHG0 476 aa15.28■□□□□ 0.04
NUP50-201ENST00000347635 KLRG2A4D1S0 409 aaPredicted RBP15.28■□□□□ 0.04
NUP50-201ENST00000347635 ITGB3P05106 788 aa15.28■□□□□ 0.04
NUP50-201ENST00000347635 PGK2P07205 417 aa15.28■□□□□ 0.04
NUP50-201ENST00000347635 ACCSLQ4AC99 568 aa15.28■□□□□ 0.04
NUP50-201ENST00000347635 GLB1LQ6UWU2 654 aa15.28■□□□□ 0.04
NUP50-201ENST00000347635 ALLCQ8N6M5 410 aa15.28■□□□□ 0.04
NUP50-201ENST00000347635 SYT17Q9BSW7 474 aa15.28■□□□□ 0.04
NUP50-201ENST00000347635 TBC1D10AQ9BXI6 508 aa15.28■□□□□ 0.04
NUP50-201ENST00000347635 SLC8A2Q9UPR5 921 aa15.28■□□□□ 0.04
NUP50-201ENST00000347635 CRYBG1Q9Y4K1 1723 aa15.28■□□□□ 0.04
NUP50-201ENST00000347635 GPR182O15218 404 aa15.28■□□□□ 0.04
NUP50-201ENST00000347635 WFS1O76024 890 aa15.28■□□□□ 0.04
NUP50-201ENST00000347635 PTGIRP43119 386 aa15.28■□□□□ 0.04
NUP50-201ENST00000347635 SV2CQ496J9 727 aa15.28■□□□□ 0.04
NUP50-201ENST00000347635 RPTORQ8N122 1335 aa15.28■□□□□ 0.04
NUP50-201ENST00000347635 FKBP6O75344 327 aa15.28■□□□□ 0.04
NUP50-201ENST00000347635 NFKBIAP25963 317 aa15.28■□□□□ 0.04
NUP50-201ENST00000347635 CYTH1Q15438 398 aa15.28■□□□□ 0.04
NUP50-201ENST00000347635 IRGCQ6NXR0 463 aa15.28■□□□□ 0.04
NUP50-201ENST00000347635 APPL2Q8NEU8 664 aa15.28■□□□□ 0.04
NUP50-201ENST00000347635 LRRC15Q8TF66 581 aa15.28■□□□□ 0.04
NUP50-201ENST00000347635 SHCBP1LQ9BZQ2 653 aa15.28■□□□□ 0.04
NUP50-201ENST00000347635 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.28■□□□□ 0.044e-8■■■■■ 51.6
NUP50-201ENST00000347635 NR2E1Q9Y466 385 aa15.28■□□□□ 0.04
NUP50-201ENST00000347635 NUP188Q5SRE5 1749 aa15.27■□□□□ 0.04
NUP50-201ENST00000347635 ZBBXA8MT70 800 aa15.27■□□□□ 0.04
NUP50-201ENST00000347635 GNGT2O14610 69 aa15.27■□□□□ 0.04
NUP50-201ENST00000347635 MGRN1O60291 552 aa15.27■□□□□ 0.04
NUP50-201ENST00000347635 RAP1GAPP47736 663 aa15.27■□□□□ 0.04
NUP50-201ENST00000347635 CCDC15Q0P6D6 951 aa15.27■□□□□ 0.04
NUP50-201ENST00000347635 IQSEC1Q6DN90 963 aa15.27■□□□□ 0.04
NUP50-201ENST00000347635 PRUNE1Q86TP1 453 aa15.27■□□□□ 0.04
NUP50-201ENST00000347635 PALB2Q86YC2 1186 aa15.27■□□□□ 0.04
NUP50-201ENST00000347635 NRBF2Q96F24 287 aa15.27■□□□□ 0.04
NUP50-201ENST00000347635 TASP1Q9H6P5 420 aa15.27■□□□□ 0.04
NUP50-201ENST00000347635 ARHGAP26Q9UNA1 814 aa15.27■□□□□ 0.04
NUP50-201ENST00000347635 DNAJC16Q9Y2G8 782 aa15.27■□□□□ 0.04
NUP50-201ENST00000347635 PCDHA2Q9Y5H9 948 aa15.27■□□□□ 0.04
NUP50-201ENST00000347635 COL1A1P02452 1464 aaPredicted RBP15.27■□□□□ 0.04
NUP50-201ENST00000347635 PLIN4Q96Q06 1357 aa15.27■□□□□ 0.04
NUP50-201ENST00000347635 S100BP04271 92 aaPredicted RBP15.27■□□□□ 0.04
NUP50-201ENST00000347635 FDFT1P37268 417 aa15.27■□□□□ 0.04
NUP50-201ENST00000347635 BMPR2Q13873 1038 aa15.27■□□□□ 0.04
NUP50-201ENST00000347635 LRRC8EQ6NSJ5 796 aa15.27■□□□□ 0.04
NUP50-201ENST00000347635 SPDYE1Q8NFV5 336 aaPredicted RBP15.27■□□□□ 0.04
NUP50-201ENST00000347635 TMA16Q96EY4 203 aaKnown RBP15.27■□□□□ 0.04
NUP50-201ENST00000347635 HPDLQ96IR7 371 aa15.27■□□□□ 0.04
NUP50-201ENST00000347635 FAM49BQ9NUQ9 324 aa15.27■□□□□ 0.04
NUP50-201ENST00000347635 CDYLQ9Y232 598 aa15.27■□□□□ 0.04
NUP50-201ENST00000347635 DRG1Q9Y295 367 aaKnown RBP15.27■□□□□ 0.04
NUP50-201ENST00000347635 TCRBV7S2A1N4TA0A589 114 aa15.27■□□□□ 0.03
NUP50-201ENST00000347635 CNTFP26441 200 aa15.27■□□□□ 0.03
NUP50-201ENST00000347635 EP400NLQ6ZTU2 488 aa15.27■□□□□ 0.03
NUP50-201ENST00000347635 FBXO16Q8IX29 292 aaPredicted RBP15.27■□□□□ 0.03
NUP50-201ENST00000347635 REM2Q8IYK8 340 aaPredicted RBP15.27■□□□□ 0.03
NUP50-201ENST00000347635 TFB1MQ8WVM0 346 aaKnown RBP15.27■□□□□ 0.03
NUP50-201ENST00000347635 SRPK1Q96SB4 655 aaKnown RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms