RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 HFE2Q6ZVN8 426 aa19.98■□□□□ 0.79
CHMP4A-201ENST00000347519 MSANTD4Q8NCY6 345 aa19.98■□□□□ 0.79
CHMP4A-201ENST00000347519 JOSD2Q8TAC2 188 aa19.98■□□□□ 0.79
CHMP4A-201ENST00000347519 SLC7A14Q8TBB6 771 aa19.98■□□□□ 0.79
CHMP4A-201ENST00000347519 FEZF2Q8TBJ5 459 aa19.98■□□□□ 0.79
CHMP4A-201ENST00000347519 TRIM11Q96F44 468 aa19.98■□□□□ 0.79
CHMP4A-201ENST00000347519 LUC7LQ9NQ29 371 aaKnown RBP19.98■□□□□ 0.79
CHMP4A-201ENST00000347519 KCND1Q9NSA2 647 aa19.98■□□□□ 0.79
CHMP4A-201ENST00000347519 IL37Q9NZH6 218 aa19.98■□□□□ 0.79
CHMP4A-201ENST00000347519 MAFFQ9ULX9 164 aa19.98■□□□□ 0.79
CHMP4A-201ENST00000347519 ZSCAN12O43309 604 aa19.97■□□□□ 0.79
CHMP4A-201ENST00000347519 NRIP1P48552 1158 aa19.97■□□□□ 0.79
CHMP4A-201ENST00000347519 DAOAP59103 153 aa19.97■□□□□ 0.79
CHMP4A-201ENST00000347519 SLC6A3Q01959 620 aa19.97■□□□□ 0.79
CHMP4A-201ENST00000347519 KIF5AQ12840 1032 aa19.97■□□□□ 0.79
CHMP4A-201ENST00000347519 TRNP1Q6NT89 227 aa19.97■□□□□ 0.79
CHMP4A-201ENST00000347519 DNAJC24Q6P3W2 148 aa19.97■□□□□ 0.79
CHMP4A-201ENST00000347519 SIX6OS1Q8N1H7 587 aa19.97■□□□□ 0.79
CHMP4A-201ENST00000347519 C3orf20Q8ND61 904 aa19.97■□□□□ 0.79
CHMP4A-201ENST00000347519 VN1R2Q8NFZ6 395 aa19.97■□□□□ 0.79
CHMP4A-201ENST00000347519 SLC35G2Q8TBE7 412 aa19.97■□□□□ 0.79
CHMP4A-201ENST00000347519 BTBD6Q96KE9 485 aa19.97■□□□□ 0.79
CHMP4A-201ENST00000347519 NUP85Q9BW27 656 aa19.97■□□□□ 0.79
CHMP4A-201ENST00000347519 TLE6Q9H808 572 aa19.97■□□□□ 0.79
CHMP4A-201ENST00000347519 MAN1C1Q9NR34 630 aa19.97■□□□□ 0.79
CHMP4A-201ENST00000347519 METTL5Q9NRN9 209 aaKnown RBP19.97■□□□□ 0.79
CHMP4A-201ENST00000347519 STRIP2Q9ULQ0 834 aa19.97■□□□□ 0.79
CHMP4A-201ENST00000347519 CDH23Q9H251 3354 aa19.97■□□□□ 0.79
CHMP4A-201ENST00000347519 BTNL10A8MVZ5 291 aa19.96■□□□□ 0.79
CHMP4A-201ENST00000347519 BUB1O43683 1085 aa19.96■□□□□ 0.79
CHMP4A-201ENST00000347519 GRAP2O75791 330 aa19.96■□□□□ 0.79
CHMP4A-201ENST00000347519 C8AP07357 584 aa19.96■□□□□ 0.79
CHMP4A-201ENST00000347519 HMGA1P17096 107 aaKnown RBP19.96■□□□□ 0.79
CHMP4A-201ENST00000347519 RPL7AP62424 266 aaKnown RBP19.96■□□□□ 0.79
CHMP4A-201ENST00000347519 MRPS5P82675 430 aaKnown RBP19.96■□□□□ 0.79
CHMP4A-201ENST00000347519 PTPROQ16827 1216 aa19.96■□□□□ 0.79
CHMP4A-201ENST00000347519 FAM102AQ5T9C2 384 aaPredicted RBP19.96■□□□□ 0.79
CHMP4A-201ENST00000347519 PM20D1Q6GTS8 502 aa19.96■□□□□ 0.79
CHMP4A-201ENST00000347519 DENND5BQ6ZUT9 1274 aa19.96■□□□□ 0.79
CHMP4A-201ENST00000347519 ZSCAN30Q86W11 494 aa19.96■□□□□ 0.79
CHMP4A-201ENST00000347519 RFFLQ8WZ73 363 aa19.96■□□□□ 0.79
CHMP4A-201ENST00000347519 IRX2Q9BZI1 471 aaPredicted RBP19.96■□□□□ 0.79
CHMP4A-201ENST00000347519 CTTNBP2NLQ9P2B4 639 aa19.96■□□□□ 0.79
CHMP4A-201ENST00000347519 WDR35Q9P2L0 1181 aa19.96■□□□□ 0.79
CHMP4A-201ENST00000347519 GUCA1BQ9UMX6 200 aa19.96■□□□□ 0.79
CHMP4A-201ENST00000347519 HCFC2Q9Y5Z7 792 aa19.96■□□□□ 0.79
CHMP4A-201ENST00000347519 DOCK6Q96HP0 2047 aa19.96■□□□□ 0.79
CHMP4A-201ENST00000347519 A0A0A6YYK5 440 aaPredicted RBP19.95■□□□□ 0.79
CHMP4A-201ENST00000347519 MACROD2A1Z1Q3 448 aa19.95■□□□□ 0.79
CHMP4A-201ENST00000347519 SIGLEC16A6NMB1 481 aa19.95■□□□□ 0.79
CHMP4A-201ENST00000347519 YJEFN3A6XGL0 299 aa19.95■□□□□ 0.79
CHMP4A-201ENST00000347519 E7ENQ6 273 aa19.95■□□□□ 0.79
CHMP4A-201ENST00000347519 MOCS3O95396 460 aa19.95■□□□□ 0.79
CHMP4A-201ENST00000347519 ZBED1O96006 694 aa19.95■□□□□ 0.79
CHMP4A-201ENST00000347519 ALDH1A3P47895 512 aa19.95■□□□□ 0.79
CHMP4A-201ENST00000347519 OGDHQ02218 1023 aa19.95■□□□□ 0.79
CHMP4A-201ENST00000347519 ADGRE1Q14246 886 aa19.95■□□□□ 0.79
CHMP4A-201ENST00000347519 TCEAL1Q15170 157 aa19.95■□□□□ 0.79
CHMP4A-201ENST00000347519 EMC1Q8N766 993 aa19.95■□□□□ 0.79
CHMP4A-201ENST00000347519 CNGB3Q9NQW8 809 aa19.95■□□□□ 0.79
CHMP4A-201ENST00000347519 PARVAQ9NVD7 372 aa19.95■□□□□ 0.79
CHMP4A-201ENST00000347519 TMEM59LQ9UK28 342 aa19.95■□□□□ 0.79
CHMP4A-201ENST00000347519 TMEM265A0A087WTH1 108 aa19.95■□□□□ 0.78
CHMP4A-201ENST00000347519 RFPL2O75678 378 aa19.95■□□□□ 0.78
CHMP4A-201ENST00000347519 FBXO21O94952 628 aa19.95■□□□□ 0.78
CHMP4A-201ENST00000347519 FYNP06241 537 aa19.95■□□□□ 0.78
CHMP4A-201ENST00000347519 RFC1P35251 1148 aaPredicted RBP19.95■□□□□ 0.78
CHMP4A-201ENST00000347519 SNX16P57768 344 aa19.95■□□□□ 0.78
CHMP4A-201ENST00000347519 RNASE9P60153 205 aaKnown RBP19.95■□□□□ 0.78
CHMP4A-201ENST00000347519 KCNC3Q14003 757 aa19.95■□□□□ 0.78
CHMP4A-201ENST00000347519 ARHGAP29Q52LW3 1261 aa19.95■□□□□ 0.78
CHMP4A-201ENST00000347519 TCEAL5Q5H9L2 206 aa19.95■□□□□ 0.78
CHMP4A-201ENST00000347519 SCD5Q86SK9 330 aa19.95■□□□□ 0.78
CHMP4A-201ENST00000347519 CPNE8Q86YQ8 564 aa19.95■□□□□ 0.78
CHMP4A-201ENST00000347519 ZNF564Q8TBZ8 553 aaPredicted RBP19.95■□□□□ 0.78
CHMP4A-201ENST00000347519 MCEEQ96PE7 176 aa19.95■□□□□ 0.78
CHMP4A-201ENST00000347519 SELENOOQ9BVL4 669 aa19.95■□□□□ 0.78
CHMP4A-201ENST00000347519 TTLL2Q9BWV7 592 aa19.95■□□□□ 0.78
CHMP4A-201ENST00000347519 NMUR1Q9HB89 426 aa19.95■□□□□ 0.78
CHMP4A-201ENST00000347519 MAGED2Q9UNF1 606 aaPredicted RBP19.95■□□□□ 0.78
CHMP4A-201ENST00000347519 SCML2Q9UQR0 700 aa19.95■□□□□ 0.78
CHMP4A-201ENST00000347519 FAM92AA1XBS5 289 aa19.94■□□□□ 0.78
CHMP4A-201ENST00000347519 TMEM191CA6NGB0 347 aa19.94■□□□□ 0.78
CHMP4A-201ENST00000347519 ZMYND10O75800 440 aa19.94■□□□□ 0.78
CHMP4A-201ENST00000347519 MTA2O94776 668 aa19.94■□□□□ 0.78
CHMP4A-201ENST00000347519 C1RP00736 705 aa19.94■□□□□ 0.78
CHMP4A-201ENST00000347519 KRT3P12035 628 aa19.94■□□□□ 0.78
CHMP4A-201ENST00000347519 YWHAQP27348 245 aa19.94■□□□□ 0.78
CHMP4A-201ENST00000347519 FLT3P36888 993 aa19.94■□□□□ 0.78
CHMP4A-201ENST00000347519 NOP2P46087 812 aaKnown RBP19.94■□□□□ 0.78
CHMP4A-201ENST00000347519 ZNF252P-AS1Q0IIN9 211 aa19.94■□□□□ 0.78
CHMP4A-201ENST00000347519 HYAL1Q12794 435 aa19.94■□□□□ 0.78
CHMP4A-201ENST00000347519 CCDC149Q6ZUS6 474 aa19.94■□□□□ 0.78
CHMP4A-201ENST00000347519 SLC26A9Q7LBE3 791 aa19.94■□□□□ 0.78
CHMP4A-201ENST00000347519 DNAJB7Q7Z6W7 309 aaPredicted RBP19.94■□□□□ 0.78
CHMP4A-201ENST00000347519 ZDHHC17Q8IUH5 632 aa19.94■□□□□ 0.78
CHMP4A-201ENST00000347519 RHOT2Q8IXI1 618 aa19.94■□□□□ 0.78
CHMP4A-201ENST00000347519 SCML4Q8N228 414 aa19.94■□□□□ 0.78
CHMP4A-201ENST00000347519 DEFB123Q8N688 67 aa19.94■□□□□ 0.78
CHMP4A-201ENST00000347519 TPCN2Q8NHX9 752 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms