RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 TRMT10CQ7L0Y3 403 aaKnown RBP11.3□□□□□ -0.6
CLCN6-202ENST00000346436 LATS2Q9NRM7 1088 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 SLC39A10Q9ULF5 831 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 UMODL1Q5DID0 1318 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 SLITRK3O94933 977 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 CTSEP14091 401 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 C16orf72Q14CZ0 275 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 FAM110CQ1W6H9 321 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 TAS1R2Q8TE23 839 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 PXMP2Q9NR77 195 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 GRAP2O75791 330 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 SHBGP04278 402 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 OVOS1Q6IE37 1185 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 DTX3LQ8TDB6 740 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 DNAJB3Q8WWF6 145 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 DTNBP1Q96EV8 351 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 CCDC3Q9BQI4 270 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 EFHD1Q9BUP0 239 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 ZCCHC2Q9C0B9 1178 aaKnown RBP11.29□□□□□ -0.6
CLCN6-202ENST00000346436 CDC42EP4Q9H3Q1 356 aaKnown RBP11.29□□□□□ -0.6
CLCN6-202ENST00000346436 HNRNPCL2B2RXH8 293 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 NFIBO00712 420 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 HNRNPCL1O60812 293 aaKnown RBP11.29□□□□□ -0.6
CLCN6-202ENST00000346436 HAUS5O94927 633 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 NCAM1P13591 858 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 MAGEA4P43358 317 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 RPL21P46778 160 aaKnown RBP11.29□□□□□ -0.6
CLCN6-202ENST00000346436 CLCN3P51790 818 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 CCL23P55773 120 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 HIF1AQ16665 826 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 PTRHD1Q6GMV3 140 aaKnown RBP11.29□□□□□ -0.6
CLCN6-202ENST00000346436 PKN3Q6P5Z2 889 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 PATL1Q86TB9 770 aaKnown RBP11.29□□□□□ -0.6
CLCN6-202ENST00000346436 SUGP1Q8IWZ8 645 aaKnown RBP11.29□□□□□ -0.6
CLCN6-202ENST00000346436 TSPAN17Q96FV3 270 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 C6orf203Q9P0P8 240 aaPredicted RBP11.29□□□□□ -0.6
CLCN6-202ENST00000346436 SPDYE5A6NIY4 337 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 PYGMP11217 842 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 CYP11B1P15538 503 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 ALDH5A1P51649 535 aaPredicted RBP11.29□□□□□ -0.6
CLCN6-202ENST00000346436 SPDYE7PQ495Y7 208 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 Q4G0T1 1027 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 DACT2Q5SW24 774 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 GPR142Q7Z601 462 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 CALML6Q8TD86 181 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 OSMRQ99650 979 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 FAM96AQ9H5X1 160 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 MARCOQ9UEW3 520 aaPredicted RBP11.29□□□□□ -0.6
CLCN6-202ENST00000346436 VPS28Q9UK41 221 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 TRAF3IP3Q9Y228 551 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 PDGFRAP16234 1089 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 FLT3P36888 993 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 ADCYAP1R1P41586 468 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 CAPZA2P47755 286 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 OVGP1Q12889 678 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 PCBP1Q15365 356 aaKnown RBP eCLIP11.29□□□□□ -0.6
CLCN6-202ENST00000346436 TATDN2Q93075 761 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 TMEM8AQ9HCN3 771 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 TBX20Q9UMR3 447 aa11.29□□□□□ -0.6
CLCN6-202ENST00000346436 VWA5AO00534 786 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 CDH16O75309 829 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 MAP3K6O95382 1288 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 RHOCP08134 193 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 PTPRAP18433 802 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 ARFIP2P53365 341 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 IL1RL1Q01638 556 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 UGP2Q16851 508 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 MRIQ9BWK5 157 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 NOD2Q9HC29 1040 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 PCDHGC5Q9Y5F6 944 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 NRCAMQ92823 1304 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 CFLARO15519 480 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 TLR2O60603 784 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 FGRP09769 529 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 ZNF286BP0CG31 522 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 RRM1P23921 792 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 BRD2P25440 801 aaKnown RBP11.28□□□□□ -0.6
CLCN6-202ENST00000346436 ARHGDIAP52565 204 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 STAT4Q14765 748 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 AARS2Q5JTZ9 985 aaKnown RBP11.28□□□□□ -0.6
CLCN6-202ENST00000346436 ADGRF2Q8IZF7 708 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 AGR3Q8TD06 166 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 FAM84AQ96KN4 292 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 IDI2Q9BXS1 227 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 GANQ9H2C0 597 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 CXorf56Q9H5V9 222 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 COPS7BQ9H9Q2 264 aaPredicted RBP11.28□□□□□ -0.6
CLCN6-202ENST00000346436 E2F8A0AVK6 867 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 TBC1D3BA6NDS4 549 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 INAVAQ3KP66 663 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 FNDC3BQ53EP0 1204 aaKnown RBP11.28□□□□□ -0.6
CLCN6-202ENST00000346436 ZNF697Q5TEC3 545 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 MOXD1Q6UVY6 613 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 ATXN7L3BQ96GX2 97 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 ABCG4Q9H172 646 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 TEKT2Q9UIF3 430 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 LNPEPQ9UIQ6 1025 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 CHMP2BQ9UQN3 213 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 CASZ1Q86V15 1759 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 TRAV19A0A0A6YYK7 116 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms