RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 ARFGAP2Q8N6H7 521 aa14.77□□□□□ -0.05
CDK5RAP1-202ENST00000346416 PGM2Q96G03 612 aa14.77□□□□□ -0.05
CDK5RAP1-202ENST00000346416 TMEM109Q9BVC6 243 aa14.77□□□□□ -0.05
CDK5RAP1-202ENST00000346416 C10orf88Q9H8K7 445 aa14.77□□□□□ -0.05
CDK5RAP1-202ENST00000346416 GPBP1L1Q9HC44 474 aaPredicted RBP14.77□□□□□ -0.05
CDK5RAP1-202ENST00000346416 PCDH9Q9HC56 1237 aa14.77□□□□□ -0.05
CDK5RAP1-202ENST00000346416 PADI3Q9ULW8 664 aa14.77□□□□□ -0.05
CDK5RAP1-202ENST00000346416 GABRDO14764 452 aa14.76□□□□□ -0.05
CDK5RAP1-202ENST00000346416 EIF3HO15372 352 aaKnown RBP eCLIP14.76□□□□□ -0.05
CDK5RAP1-202ENST00000346416 TTC4O95801 387 aa14.76□□□□□ -0.05
CDK5RAP1-202ENST00000346416 PECAM1P16284 738 aaPredicted RBP14.76□□□□□ -0.05
CDK5RAP1-202ENST00000346416 DESP17661 470 aa14.76□□□□□ -0.05
CDK5RAP1-202ENST00000346416 CD52P31358 61 aa14.76□□□□□ -0.05
CDK5RAP1-202ENST00000346416 CLCNKBP51801 687 aa14.76□□□□□ -0.05
CDK5RAP1-202ENST00000346416 DPYSL3Q14195 570 aa14.76□□□□□ -0.05
CDK5RAP1-202ENST00000346416 KYNUQ16719 465 aa14.76□□□□□ -0.05
CDK5RAP1-202ENST00000346416 FUKQ8N0W3 1084 aa14.76□□□□□ -0.05
CDK5RAP1-202ENST00000346416 EPS8L3Q8TE67 593 aaKnown RBP14.76□□□□□ -0.05
CDK5RAP1-202ENST00000346416 TLCD1Q96CP7 247 aa14.76□□□□□ -0.05
CDK5RAP1-202ENST00000346416 SENP8Q96LD8 212 aa14.76□□□□□ -0.05
CDK5RAP1-202ENST00000346416 HSFY1Q96LI6 401 aa14.76□□□□□ -0.05
CDK5RAP1-202ENST00000346416 HNRNPABQ99729 332 aaKnown RBP14.76□□□□□ -0.05
CDK5RAP1-202ENST00000346416 MAK16Q9BXY0 300 aaKnown RBP14.76□□□□□ -0.05
CDK5RAP1-202ENST00000346416 CYLDQ9NQC7 956 aa14.76□□□□□ -0.05
CDK5RAP1-202ENST00000346416 GHRP10912 638 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 PTPN1P18031 435 aaKnown RBP14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 TFE3P19532 575 aaPredicted RBP14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 CST5P28325 142 aaPredicted RBP14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 ACADSBP45954 432 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 SCNN1GP51170 649 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 GDF10P55107 478 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 HDAC4P56524 1084 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 KRT81Q14533 505 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 C6orf118Q5T5N4 469 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 CROCCP2Q86T23 111 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 MAP7D3Q8IWC1 876 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 ZCCHC9Q8N567 271 aaKnown RBP14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 TPX2Q9ULW0 747 aaKnown RBP14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 GIT1Q9Y2X7 761 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 CLDN5O00501 218 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 KIF3CO14782 793 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 RASGRF2O14827 1237 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 XPO1O14980 1071 aaKnown RBP14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 RGS16O15492 202 aaPredicted RBP14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 MGEA5O60502 916 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 FAM163BP0C2L3 166 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 SCNN1AP37088 669 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 MDH1P40925 334 aaKnown RBP14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 PTPN9P43378 593 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 SLCO1A2P46721 670 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 CDR1P51861 262 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 PPP2R2AP63151 447 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 PDK2Q15119 407 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 ZC3H12AQ5D1E8 599 aaKnown RBP14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 MRPL10Q7Z7H8 261 aaKnown RBP14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 PIGZQ86VD9 579 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 PCSK9Q8NBP7 692 aaKnown RBP14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 SPATA18Q8TC71 538 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 TEKT4Q8WW24 435 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 RBM15Q96T37 977 aaKnown RBP eCLIP14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 TBCBQ99426 244 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 DUSP16Q9BY84 665 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 FOXP3Q9BZS1 431 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 GPATCH2LQ9NWQ4 482 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 NINJ2Q9NZG7 142 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 SLC12A6Q9UHW9 1150 aa14.75□□□□□ -0.05
CDK5RAP1-202ENST00000346416 IL4RP24394 825 aa14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 HNRNPH2P55795 449 aaKnown RBP14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 SLC8A3P57103 927 aa14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 EIF3EP60228 445 aaKnown RBP14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 PPARDQ03181 441 aa14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 TFDP2Q14188 446 aa14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 PAQR9Q6ZVX9 377 aa14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 ARCQ7LC44 396 aa14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 RELL1Q8IUW5 271 aa14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 RNF169Q8NCN4 708 aa14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 C3orf58Q8NDZ4 430 aa14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 RSAD2Q8WXG1 361 aa14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 RNF157Q96PX1 679 aa14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 NCAPGQ9BPX3 1015 aa14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 C11orf84Q9BUA3 381 aaPredicted RBP14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 SNRNP25Q9BV90 132 aaKnown RBP14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 ADAM33Q9BZ11 813 aa14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 TRMT13Q9NUP7 481 aaKnown RBP14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 DDX43Q9NXZ2 648 aaKnown RBP14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 CWC15Q9P013 229 aaKnown RBP14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 MCF2LO15068 1137 aa14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 MDM4O15151 490 aa14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 BEST1O76090 585 aa14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 RBP3P10745 1247 aa14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 NPR3P17342 541 aa14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 IBSPP21815 317 aaPredicted RBP14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 LSP1P33241 339 aa14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 ITGA7Q13683 1181 aa14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 LPIN1Q14693 890 aa14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 MORF4L2Q15014 288 aa14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 CA9Q16790 459 aa14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 MDH1BQ5I0G3 518 aa14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 RNASEH2BQ5TBB1 312 aaKnown RBP14.74□□□□□ -0.05
CDK5RAP1-202ENST00000346416 KIAA0319Q5VV43 1072 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms