RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 CLEC20AQ6ZU45 233 aa17.03■□□□□ 0.32
RAB5C-201ENST00000346213 UNC93AQ86WB7 457 aa17.03■□□□□ 0.32
RAB5C-201ENST00000346213 TRIM59Q8IWR1 403 aa17.03■□□□□ 0.32
RAB5C-201ENST00000346213 MRPS31Q92665 395 aaKnown RBP17.03■□□□□ 0.32
RAB5C-201ENST00000346213 FAM122AQ96E09 287 aa17.03■□□□□ 0.32
RAB5C-201ENST00000346213 ZFRQ96KR1 1074 aaKnown RBP17.03■□□□□ 0.32
RAB5C-201ENST00000346213 GCNAQ96QF7 691 aa17.03■□□□□ 0.32
RAB5C-201ENST00000346213 ZSWIM1Q9BR11 485 aa17.03■□□□□ 0.32
RAB5C-201ENST00000346213 KCNH6Q9H252 994 aa17.03■□□□□ 0.32
RAB5C-201ENST00000346213 TRPV5Q9NQA5 729 aa17.03■□□□□ 0.32
RAB5C-201ENST00000346213 CISHQ9NSE2 258 aa17.03■□□□□ 0.32
RAB5C-201ENST00000346213 RBM12Q9NTZ6 932 aaKnown RBP17.03■□□□□ 0.32
RAB5C-201ENST00000346213 TDP1Q9NUW8 608 aa17.03■□□□□ 0.32
RAB5C-201ENST00000346213 OSER1Q9NX31 292 aa17.03■□□□□ 0.32
RAB5C-201ENST00000346213 NDRG2Q9UN36 371 aaKnown RBP17.03■□□□□ 0.32
RAB5C-201ENST00000346213 BICDL2A1A5D9 508 aa17.02■□□□□ 0.32
RAB5C-201ENST00000346213 FAM170BA6NMN3 283 aa17.02■□□□□ 0.32
RAB5C-201ENST00000346213 OAS1P00973 400 aaKnown RBP17.02■□□□□ 0.32
RAB5C-201ENST00000346213 PFKPQ01813 784 aa17.02■□□□□ 0.32
RAB5C-201ENST00000346213 APBA1Q02410 837 aa17.02■□□□□ 0.32
RAB5C-201ENST00000346213 FILIP1LQ4L180 1135 aa17.02■□□□□ 0.32
RAB5C-201ENST00000346213 ARHGEF19Q8IW93 802 aa17.02■□□□□ 0.32
RAB5C-201ENST00000346213 JAKMIP2Q96AA8 810 aa17.02■□□□□ 0.32
RAB5C-201ENST00000346213 CEP63Q96MT8 703 aa17.02■□□□□ 0.32
RAB5C-201ENST00000346213 MED10Q9BTT4 135 aa17.02■□□□□ 0.32
RAB5C-201ENST00000346213 OBP2AQ9NY56 170 aa17.02■□□□□ 0.32
RAB5C-201ENST00000346213 GMIPQ9P107 970 aa17.02■□□□□ 0.32
RAB5C-201ENST00000346213 FAM92AA1XBS5 289 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 TULP2O00295 520 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 ARID5BQ14865 1188 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 ANGPT1Q15389 498 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 FRMD5Q7Z6J6 570 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 CELF5Q8N6W0 485 aaKnown RBP17.01■□□□□ 0.31
RAB5C-201ENST00000346213 IRF7Q92985 503 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 SMARCD1Q96GM5 515 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 TNIP3Q96KP6 325 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 HNRNPABQ99729 332 aaKnown RBP17.01■□□□□ 0.31
RAB5C-201ENST00000346213 LINC00597Q9H2U6 94 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 EBF3Q9H4W6 596 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 THAP9Q9H5L6 903 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 CYP3A43Q9HB55 503 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 FBRSL1Q9HCM7 1045 aaKnown RBP17.01■□□□□ 0.31
RAB5C-201ENST00000346213 DMAP1Q9NPF5 467 aaPredicted RBP17.01■□□□□ 0.31
RAB5C-201ENST00000346213 GKN1Q9NS71 199 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 SPTLC3Q9NUV7 552 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 CHORDC1Q9UHD1 332 aaPredicted RBP17.01■□□□□ 0.31
RAB5C-201ENST00000346213 WNT6Q9Y6F9 365 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 ZNF638Q14966 1978 aaKnown RBP17.01■□□□□ 0.31
RAB5C-201ENST00000346213 P4HA1P13674 534 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 ACO1P21399 889 aaKnown RBP17.01■□□□□ 0.31
RAB5C-201ENST00000346213 AVPR1AP37288 418 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 PTPN5P54829 565 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 CCZ1BP86790 482 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 CCZ1P86791 482 aaPredicted RBP17.01■□□□□ 0.31
RAB5C-201ENST00000346213 TBX2Q13207 712 aaPredicted RBP17.01■□□□□ 0.31
RAB5C-201ENST00000346213 GAB4Q2WGN9 574 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 TCP11X2Q5H9J9 407 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 FOXR2Q6PJQ5 311 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 Q6ZS52 159 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 NUP93Q8N1F7 819 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 TTC16Q8NEE8 873 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 ANKRD20A12PQ8NF67 263 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 SH3RF2Q8TEC5 729 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 EZH1Q92800 747 aaPredicted RBP17.01■□□□□ 0.31
RAB5C-201ENST00000346213 CLDN23Q96B33 292 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 NT5C1AQ9BXI3 368 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 SRRTQ9BXP5 876 aaKnown RBP17.01■□□□□ 0.31
RAB5C-201ENST00000346213 CCSER2Q9H7U1 834 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 NMUR1Q9HB89 426 aa17.01■□□□□ 0.31
RAB5C-201ENST00000346213 UXTQ9UBK9 157 aaPredicted RBP17.01■□□□□ 0.31
RAB5C-201ENST00000346213 F5P12259 2224 aa17■□□□□ 0.31
RAB5C-201ENST00000346213 SPECC1L-ADORA2AF8WAN1 911 aa17■□□□□ 0.31
RAB5C-201ENST00000346213 RNF225M0QZC1 329 aaPredicted RBP17■□□□□ 0.31
RAB5C-201ENST00000346213 CYP26A1O43174 497 aa17■□□□□ 0.31
RAB5C-201ENST00000346213 CKMP06732 381 aa17■□□□□ 0.31
RAB5C-201ENST00000346213 ZDHHC11BP0C7U3 371 aa17■□□□□ 0.31
RAB5C-201ENST00000346213 DDX6P26196 483 aaKnown RBP eCLIP17■□□□□ 0.311e-7■■■■■ 30.5
RAB5C-201ENST00000346213 ANXA13P27216 316 aa17■□□□□ 0.31
RAB5C-201ENST00000346213 HOXD11P31277 338 aaPredicted RBP17■□□□□ 0.31
RAB5C-201ENST00000346213 CTHP32929 405 aa17■□□□□ 0.31
RAB5C-201ENST00000346213 MARSP56192 900 aaKnown RBP17■□□□□ 0.31
RAB5C-201ENST00000346213 MESP2Q0VG99 397 aa17■□□□□ 0.31
RAB5C-201ENST00000346213 CUL2Q13617 745 aa17■□□□□ 0.31
RAB5C-201ENST00000346213 ZNF268Q14587 947 aaPredicted RBP17■□□□□ 0.31
RAB5C-201ENST00000346213 KRT31Q15323 416 aa17■□□□□ 0.31
RAB5C-201ENST00000346213 PKN3Q6P5Z2 889 aa17■□□□□ 0.31
RAB5C-201ENST00000346213 TTC30AQ86WT1 665 aa17■□□□□ 0.31
RAB5C-201ENST00000346213 CYFIP2Q96F07 1278 aa17■□□□□ 0.31
RAB5C-201ENST00000346213 SMPD4Q9NXE4 827 aa17■□□□□ 0.31
RAB5C-201ENST00000346213 HELZP42694 1942 aaKnown RBP17■□□□□ 0.31
RAB5C-201ENST00000346213 KCNJ18B7U540 433 aa16.99■□□□□ 0.31
RAB5C-201ENST00000346213 DPYSL4O14531 572 aa16.99■□□□□ 0.31
RAB5C-201ENST00000346213 COCHO43405 550 aa16.99■□□□□ 0.31
RAB5C-201ENST00000346213 GABBR2O75899 941 aa16.99■□□□□ 0.31
RAB5C-201ENST00000346213 TBX18O95935 607 aa16.99■□□□□ 0.31
RAB5C-201ENST00000346213 CHRNB1P11230 501 aa16.99■□□□□ 0.31
RAB5C-201ENST00000346213 EEF1GP26641 437 aaKnown RBP16.99■□□□□ 0.31
RAB5C-201ENST00000346213 PBX1P40424 430 aa16.99■□□□□ 0.31
RAB5C-201ENST00000346213 KCNJ12Q14500 433 aa16.99■□□□□ 0.31
RAB5C-201ENST00000346213 MTF1Q14872 753 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms