RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 MAML3Q96JK9 1138 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 KLC2Q9H0B6 622 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 CPSF2Q9P2I0 782 aaKnown RBP13.86□□□□□ -0.19
CASC4-202ENST00000345795 AP4E1Q9UPM8 1137 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 TSPAN1O60635 241 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 ZC3H11AO75152 810 aaKnown RBP eCLIP13.86□□□□□ -0.19
CASC4-202ENST00000345795 KDELR1P24390 212 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 TARSP26639 723 aaKnown RBP13.86□□□□□ -0.19
CASC4-202ENST00000345795 RPL22P35268 128 aaKnown RBP13.86□□□□□ -0.19
CASC4-202ENST00000345795 ASPAP45381 313 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 TKTL1P51854 596 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 PITX1P78337 314 aaPredicted RBP13.86□□□□□ -0.19
CASC4-202ENST00000345795 HTRA3P83110 453 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 PTK7Q13308 1070 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 TFDP2Q14188 446 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 ZNF484Q5JVG2 852 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 RASGEF1CQ8N431 466 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 FBXO41Q8TF61 875 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 PABPC5Q96DU9 382 aaKnown RBP13.86□□□□□ -0.19
CASC4-202ENST00000345795 C12orf42Q96LP6 360 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 ARHGAP39Q9C0H5 1083 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 IFT122Q9HBG6 1241 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 PRDM5Q9NQX1 630 aaPredicted RBP13.86□□□□□ -0.19
CASC4-202ENST00000345795 PPP2R3BQ9Y5P8 575 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 ARAP2Q8WZ64 1704 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 TRIM49D1C9J1S8 452 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 COPEO14579 308 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 STBD1O95210 358 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 IL18RAPO95256 599 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 CDC25CP30307 473 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 ALDH3A1P30838 453 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 CD52P31358 61 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 GRIA1P42261 906 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 PTGIRP43119 386 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 VCPP55072 806 aaKnown RBP13.86□□□□□ -0.19
CASC4-202ENST00000345795 FSCN1Q16658 493 aaKnown RBP13.86□□□□□ -0.19
CASC4-202ENST00000345795 PIGZQ86VD9 579 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 EXOC8Q8IYI6 725 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 UNC5BQ8IZJ1 945 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 BBOF1Q8ND07 529 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 C3orf20Q8ND61 904 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 MCUR1Q96AQ8 359 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 ASAP2O43150 1006 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 BUD23O43709 281 aaKnown RBP13.85□□□□□ -0.19
CASC4-202ENST00000345795 LIASO43766 372 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 MMP3P08254 477 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 ADRA1DP25100 572 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 TAF6P49848 677 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 SNRPFP62306 86 aaKnown RBP13.85□□□□□ -0.19
CASC4-202ENST00000345795 CCNG2Q16589 344 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 OLFML2BQ68BL8 750 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 SLC27A1Q6PCB7 646 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 RSPH3Q86UC2 560 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 SLC25A41Q8N5S1 370 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 GIMAP7Q8NHV1 300 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 TMEM40Q8WWA1 233 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 SNRNP25Q9BV90 132 aaKnown RBP13.85□□□□□ -0.19
CASC4-202ENST00000345795 NIFKQ9BYG3 293 aaKnown RBP13.85□□□□□ -0.19
CASC4-202ENST00000345795 TNFSF13BQ9Y275 285 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 PSTPIP1O43586 416 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 PMPCBO75439 489 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 SP100P23497 879 aaPredicted RBP13.85□□□□□ -0.19
CASC4-202ENST00000345795 CYP2F1P24903 491 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 ECHS1P30084 290 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 AVPR1AP37288 418 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 GLRBP48167 497 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 C16orf46Q6P387 395 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 EMID1Q96A84 441 aaPredicted RBP13.85□□□□□ -0.19
CASC4-202ENST00000345795 SPON2Q9BUD6 331 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 STRA6Q9BX79 667 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 DNAI2Q9GZS0 605 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.85□□□□□ -0.19
CASC4-202ENST00000345795 COQ4Q9Y3A0 265 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 ARHGAP42A6NI28 874 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 SNAI1O95863 264 aaPredicted RBP13.85□□□□□ -0.19
CASC4-202ENST00000345795 PYGBP11216 843 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 VDRP11473 427 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 RPA3P35244 121 aaPredicted RBP13.85□□□□□ -0.19
CASC4-202ENST00000345795 KBTBD12Q3ZCT8 623 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 KCNT2Q6UVM3 1135 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 USP50Q70EL3 339 aaPredicted RBP13.85□□□□□ -0.19
CASC4-202ENST00000345795 PNPLA1Q8N8W4 532 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 ATP11CQ8NB49 1132 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 CCDC124Q96CT7 223 aaKnown RBP13.85□□□□□ -0.19
CASC4-202ENST00000345795 FBXL18Q96ME1 805 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 CYTH2Q99418 400 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 PAFAH2Q99487 392 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 MECRQ9BV79 373 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 PPP1R12CQ9BZL4 782 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 TMEM134Q9H6X4 195 aa13.85□□□□□ -0.19
CASC4-202ENST00000345795 XPOTO43592 962 aaKnown RBP13.84□□□□□ -0.19
CASC4-202ENST00000345795 TOP3BO95985 862 aaKnown RBP13.84□□□□□ -0.19
CASC4-202ENST00000345795 MT-CO1P00395 513 aa13.84□□□□□ -0.19
CASC4-202ENST00000345795 MAGEA9P43362 315 aa13.84□□□□□ -0.19
CASC4-202ENST00000345795 CXCR3P49682 368 aa13.84□□□□□ -0.19
CASC4-202ENST00000345795 KDSRQ06136 332 aa13.84□□□□□ -0.19
CASC4-202ENST00000345795 TRIM32Q13049 653 aa13.84□□□□□ -0.19
CASC4-202ENST00000345795 NAA25Q14CX7 972 aa13.84□□□□□ -0.19
CASC4-202ENST00000345795 PACS2Q86VP3 889 aa13.84□□□□□ -0.19
CASC4-202ENST00000345795 SEPT5Q99719 369 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms