RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 BNC2Q6ZN30 1099 aaPredicted RBP18.18■□□□□ 0.5
SMAD4-201ENST00000342988 USP7Q93009 1102 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 CHI3L2Q15782 390 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 BICRALQ6AI39 1079 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 UGT2B28Q9BY64 529 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 TTC3P53804 2025 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 EEF2KO00418 725 aaKnown RBP18.18■□□□□ 0.5
SMAD4-201ENST00000342988 IFRD1O00458 451 aaPredicted RBP18.18■□□□□ 0.5
SMAD4-201ENST00000342988 RGS14O43566 566 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 NUDT14O95848 222 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 PCNAP12004 261 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 FBXW10Q5XX13 1052 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 TTC29Q8NA56 475 aaPredicted RBP18.18■□□□□ 0.5
SMAD4-201ENST00000342988 ZNF512Q96ME7 567 aaPredicted RBP18.18■□□□□ 0.5
SMAD4-201ENST00000342988 METTL21EPA6NDL7 271 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 CALB2P22676 271 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 MAPK11Q15759 364 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 PCNX4Q63HM2 1172 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 TFB1MQ8WVM0 346 aaKnown RBP18.18■□□□□ 0.5
SMAD4-201ENST00000342988 CCDC115Q96NT0 180 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 UBP1Q9NZI7 540 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 YEATS2Q9ULM3 1422 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 RESP18Q5W5W9 173 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 SNX13Q9Y5W8 968 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 EFNA5P52803 228 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 TMEM132BQ14DG7 1078 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 EIF3MQ7L2H7 374 aaKnown RBP18.17■□□□□ 0.5
SMAD4-201ENST00000342988 SNIP1Q8TAD8 396 aaKnown RBP18.17■□□□□ 0.5
SMAD4-201ENST00000342988 APBB2Q92870 758 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 CHID1Q9BWS9 393 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 NEURL1BA8MQ27 555 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 MDM4O15151 490 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 ASNSP08243 561 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 GCLMP48507 274 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 RGS1Q08116 209 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 CCSAPQ6IQ19 270 aaPredicted RBP18.17■□□□□ 0.5
SMAD4-201ENST00000342988 MYLPFQ96A32 169 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 E2F7Q96AV8 911 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 FAM217BQ9NTX9 383 aaPredicted RBP18.17■□□□□ 0.5
SMAD4-201ENST00000342988 EHD3Q9NZN3 535 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 TMEM5Q9Y2B1 443 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 A0A1W2PQ72 361 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 CNTFP26441 200 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 LSP1P33241 339 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 SOX11P35716 441 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 MYBPC2Q14324 1141 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 DRAP1Q14919 205 aaPredicted RBP18.17■□□□□ 0.5
SMAD4-201ENST00000342988 CCDC54Q8NEL0 328 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 C14orf93Q9H972 538 aaKnown RBP18.17■□□□□ 0.5
SMAD4-201ENST00000342988 LMTK3Q96Q04 1460 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 PHGDHO43175 533 aaKnown RBP18.17■□□□□ 0.5
SMAD4-201ENST00000342988 FAM58BPP0C7Q3 252 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 EEPD1Q7L9B9 569 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 ZNF605Q86T29 641 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 THNSL1Q8IYQ7 743 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 RMDN3Q96TC7 470 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 AREL1O15033 823 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 RB1P06400 928 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 PROX1Q92786 737 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 CKLFQ9UBR5 152 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 URB1O60287 2271 aaKnown RBP18.17■□□□□ 0.5
SMAD4-201ENST00000342988 CCNB2O95067 398 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 PRG2P13727 222 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 SERPINB5P36952 375 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 FDFT1P37268 417 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 ROGDIQ9GZN7 287 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 EHD1Q9H4M9 534 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 FANCAO15360 1455 aa18.17■□□□□ 0.5
SMAD4-201ENST00000342988 CD4P01730 458 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 SCRN3Q0VDG4 424 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 ZBTB10Q96DT7 871 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 NMRK2Q9NPI5 230 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 RGS21Q2M5E4 152 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 LRRC6Q86X45 466 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 AKAP1Q92667 903 aaKnown RBP eCLIP18.16■□□□□ 0.5
SMAD4-201ENST00000342988 C12orf4Q9NQ89 552 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 DNMBPQ6XZF7 1577 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 IQCMA0A1B0GVH7 501 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 FKBP6O75344 327 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 GSTM5P46439 218 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 GEMIN4P57678 1058 aaKnown RBP18.16■□□□□ 0.5
SMAD4-201ENST00000342988 FRMD5Q7Z6J6 570 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 TMEM132CQ8N3T6 1108 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 HPS3Q969F9 1004 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 RCOR1Q9UKL0 485 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 GJA1P17302 382 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 TRMT5Q32P41 509 aaKnown RBP18.16■□□□□ 0.5
SMAD4-201ENST00000342988 FSTL5Q8N475 847 aaPredicted RBP18.16■□□□□ 0.5
SMAD4-201ENST00000342988 COX4I2Q96KJ9 171 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 MCCC1Q96RQ3 725 aaPredicted RBP18.16■□□□□ 0.5
SMAD4-201ENST00000342988 GPN1Q9HCN4 374 aaPredicted RBP18.16■□□□□ 0.5
SMAD4-201ENST00000342988 BAG6P46379 1132 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 TOMM20Q15388 145 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 DAW1Q8N136 415 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 ZNF579Q8NAF0 562 aaKnown RBP18.16■□□□□ 0.5
SMAD4-201ENST00000342988 C1orf54Q8WWF1 131 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 MPP4Q96JB8 637 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 NFKBIZQ9BYH8 718 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 BHMT2Q9H2M3 363 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 RSL24D1Q9UHA3 163 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms