RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 KAT2BQ92831 832 aa15.52■□□□□ 0.07
UBE3B-202ENST00000342494 FBXO44Q9H4M3 255 aa15.52■□□□□ 0.07
UBE3B-202ENST00000342494 IGFLR1Q9H665 355 aa15.52■□□□□ 0.07
UBE3B-202ENST00000342494 CISHQ9NSE2 258 aa15.52■□□□□ 0.07
UBE3B-202ENST00000342494 MYO3AQ8NEV4 1616 aa15.52■□□□□ 0.07
UBE3B-202ENST00000342494 GOLGA8TH3BQL2 631 aa15.52■□□□□ 0.07
UBE3B-202ENST00000342494 GEMIN4P57678 1058 aaKnown RBP15.52■□□□□ 0.07
UBE3B-202ENST00000342494 CNGA3Q16281 694 aa15.52■□□□□ 0.07
UBE3B-202ENST00000342494 LVRNQ6Q4G3 990 aa15.52■□□□□ 0.07
UBE3B-202ENST00000342494 LAYNQ6UX15 382 aa15.52■□□□□ 0.07
UBE3B-202ENST00000342494 RAD9BQ6WBX8 426 aa15.52■□□□□ 0.07
UBE3B-202ENST00000342494 ZNF614Q8N883 585 aa15.52■□□□□ 0.07
UBE3B-202ENST00000342494 USP38Q8NB14 1042 aa15.52■□□□□ 0.07
UBE3B-202ENST00000342494 CCDC3Q9BQI4 270 aa15.52■□□□□ 0.07
UBE3B-202ENST00000342494 UBE2OQ9C0C9 1292 aaKnown RBP15.52■□□□□ 0.07
UBE3B-202ENST00000342494 DIP2AQ14689 1571 aa15.52■□□□□ 0.07
UBE3B-202ENST00000342494 SETBP1Q9Y6X0 1596 aa15.52■□□□□ 0.07
UBE3B-202ENST00000342494 ABCA6Q8N139 1617 aa15.52■□□□□ 0.07
UBE3B-202ENST00000342494 TRPC5OSA6NMA1 111 aa15.51■□□□□ 0.07
UBE3B-202ENST00000342494 GSNP06396 782 aa15.51■□□□□ 0.07
UBE3B-202ENST00000342494 CYP24A1Q07973 514 aa15.51■□□□□ 0.07
UBE3B-202ENST00000342494 CHI3L2Q15782 390 aa15.51■□□□□ 0.07
UBE3B-202ENST00000342494 PLEKHM3Q6ZWE6 761 aa15.51■□□□□ 0.07
UBE3B-202ENST00000342494 RIBC1Q8N443 379 aaPredicted RBP15.51■□□□□ 0.07
UBE3B-202ENST00000342494 REPS2Q8NFH8 660 aa15.51■□□□□ 0.07
UBE3B-202ENST00000342494 ZSWIM1Q9BR11 485 aa15.51■□□□□ 0.07
UBE3B-202ENST00000342494 ROPN1BQ9BZX4 212 aaPredicted RBP15.51■□□□□ 0.07
UBE3B-202ENST00000342494 ROPN1Q9HAT0 212 aaPredicted RBP15.51■□□□□ 0.07
UBE3B-202ENST00000342494 MAN1A2O60476 641 aa15.51■□□□□ 0.07
UBE3B-202ENST00000342494 TCN1P20061 433 aaPredicted RBP15.51■□□□□ 0.07
UBE3B-202ENST00000342494 MDH1P40925 334 aaKnown RBP15.51■□□□□ 0.07
UBE3B-202ENST00000342494 SCNN1BP51168 640 aa15.51■□□□□ 0.07
UBE3B-202ENST00000342494 SGCGQ13326 291 aa15.51■□□□□ 0.07
UBE3B-202ENST00000342494 CCNJLQ8IV13 435 aa15.51■□□□□ 0.07
UBE3B-202ENST00000342494 NT5MQ9NPB1 228 aa15.51■□□□□ 0.07
UBE3B-202ENST00000342494 AKAP5P24588 427 aa15.51■□□□□ 0.07
UBE3B-202ENST00000342494 FSCN1Q16658 493 aaKnown RBP15.51■□□□□ 0.07
UBE3B-202ENST00000342494 TC2NQ8N9U0 490 aa15.51■□□□□ 0.07
UBE3B-202ENST00000342494 INPP5DQ92835 1189 aa15.51■□□□□ 0.07
UBE3B-202ENST00000342494 CNPY3Q9BT09 278 aa15.51■□□□□ 0.07
UBE3B-202ENST00000342494 CEMIPQ8WUJ3 1361 aa15.51■□□□□ 0.07
UBE3B-202ENST00000342494 C16orf96A6NNT2 1141 aa15.51■□□□□ 0.07
UBE3B-202ENST00000342494 PPP1R37O75864 691 aa15.51■□□□□ 0.07
UBE3B-202ENST00000342494 HNRNPH2P55795 449 aaKnown RBP15.51■□□□□ 0.07
UBE3B-202ENST00000342494 USP50Q70EL3 339 aaPredicted RBP15.51■□□□□ 0.07
UBE3B-202ENST00000342494 C11orf74Q86VG3 221 aa15.51■□□□□ 0.07
UBE3B-202ENST00000342494 TSC22D3Q99576 134 aa15.51■□□□□ 0.07
UBE3B-202ENST00000342494 ECSITQ9BQ95 431 aa15.51■□□□□ 0.07
UBE3B-202ENST00000342494 UNC13BO14795 1591 aa15.51■□□□□ 0.07
UBE3B-202ENST00000342494 IFRD1O00458 451 aaPredicted RBP15.5■□□□□ 0.07
UBE3B-202ENST00000342494 JCHAINP01591 159 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 SLC27A1Q6PCB7 646 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 EME1Q96AY2 570 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 XPO6Q96QU8 1125 aaKnown RBP15.5■□□□□ 0.07
UBE3B-202ENST00000342494 FICDQ9BVA6 458 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 SDR42E2A6NKP2 422 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 VGLL3A8MV65 326 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 DGKIO75912 1065 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 HPGDP15428 266 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 CCR1P32246 355 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 TRPC1P48995 793 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 ALDH5A1P51649 535 aaPredicted RBP15.5■□□□□ 0.07
UBE3B-202ENST00000342494 PPATQ06203 517 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 PTPAQ15257 358 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 TFDP3Q5H9I0 405 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 PPM1LQ5SGD2 360 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 SETD3Q86TU7 594 aaPredicted RBP15.5■□□□□ 0.07
UBE3B-202ENST00000342494 MMGT1Q8N4V1 131 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 ARMC2Q8NEN0 867 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 OR2W6PQ8NHA6 318 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 SMPD4Q9NXE4 827 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 PSMA3P25788 255 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 PSEN2P49810 448 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 IRAK1BP1Q5VVH5 260 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 ZNF720Q7Z2F6 126 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 TPCN2Q8NHX9 752 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 TAS1R2Q8TE23 839 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 TUBGCP3Q96CW5 907 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 CARD9Q9H257 536 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 KRT8P05787 483 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 FNTAP49354 379 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 ACVR2BQ13705 512 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 PREPLQ4J6C6 727 aaPredicted RBP15.5■□□□□ 0.07
UBE3B-202ENST00000342494 POTEAQ6S8J7 498 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 SH2D3CQ8N5H7 860 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 CSGALNACT1Q8TDX6 532 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 FAM136AQ96C01 138 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 MTO1Q9Y2Z2 717 aaKnown RBP15.5■□□□□ 0.07
UBE3B-202ENST00000342494 OAZ1P54368 228 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 SOX10P56693 466 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 RD3Q7Z3Z2 195 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 PGLYRP2Q96PD5 576 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 THUMPD3Q9BV44 507 aaKnown RBP15.5■□□□□ 0.07
UBE3B-202ENST00000342494 LRRC40Q9H9A6 602 aa15.5■□□□□ 0.07
UBE3B-202ENST00000342494 DRG1Q9Y295 367 aaKnown RBP15.5■□□□□ 0.07
UBE3B-202ENST00000342494 TMEM120BA0PK00 339 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 HOXC6P09630 235 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 SLC16A1P53985 500 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 DMTNQ08495 405 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 DEPDC1Q5TB30 811 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms