RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 ANKRD40Q6AI12 368 aa10.96□□□□□ -0.65
TPM3-207ENST00000341372 KDF1Q8NAX2 398 aaPredicted RBP10.96□□□□□ -0.65
TPM3-207ENST00000341372 HSH2DQ96JZ2 352 aa10.96□□□□□ -0.65
TPM3-207ENST00000341372 TMEM209Q96SK2 561 aa10.96□□□□□ -0.65
TPM3-207ENST00000341372 TSG101Q99816 390 aa10.96□□□□□ -0.65
TPM3-207ENST00000341372 INSL5Q9Y5Q6 135 aa10.96□□□□□ -0.65
TPM3-207ENST00000341372 SNX9Q9Y5X1 595 aa10.96□□□□□ -0.65
TPM3-207ENST00000341372 CLUHO75153 1309 aa10.96□□□□□ -0.65
TPM3-207ENST00000341372 MTMR11A4FU01 709 aa10.96□□□□□ -0.66
TPM3-207ENST00000341372 TRIM49BA6NDI0 452 aa10.96□□□□□ -0.66
TPM3-207ENST00000341372 CETN3O15182 167 aa10.96□□□□□ -0.66
TPM3-207ENST00000341372 HUS1O60921 280 aa10.96□□□□□ -0.66
TPM3-207ENST00000341372 VNN1O95497 513 aa10.96□□□□□ -0.66
TPM3-207ENST00000341372 OR4Q2P0C623 313 aa10.96□□□□□ -0.66
TPM3-207ENST00000341372 CLCQ05315 142 aa10.96□□□□□ -0.66
TPM3-207ENST00000341372 SMARCB1Q12824 385 aa10.96□□□□□ -0.66
TPM3-207ENST00000341372 SOWAHAQ2M3V2 549 aa10.96□□□□□ -0.66
TPM3-207ENST00000341372 TTI2Q6NXR4 508 aa10.96□□□□□ -0.66
TPM3-207ENST00000341372 GK5Q6ZS86 529 aa10.96□□□□□ -0.66
TPM3-207ENST00000341372 PCGF5Q86SE9 256 aa10.96□□□□□ -0.66
TPM3-207ENST00000341372 OSTM1Q86WC4 334 aa10.96□□□□□ -0.66
TPM3-207ENST00000341372 TRIM42Q8IWZ5 723 aa10.96□□□□□ -0.66
TPM3-207ENST00000341372 ADGRF2Q8IZF7 708 aa10.96□□□□□ -0.66
TPM3-207ENST00000341372 THEM5Q8N1Q8 247 aa10.96□□□□□ -0.66
TPM3-207ENST00000341372 KBTBD7Q8WVZ9 684 aa10.96□□□□□ -0.66
TPM3-207ENST00000341372 SYAP1Q96A49 352 aaPredicted RBP10.96□□□□□ -0.66
TPM3-207ENST00000341372 PKMYT1Q99640 499 aa10.96□□□□□ -0.66
TPM3-207ENST00000341372 MAPRE3Q9UPY8 281 aa10.96□□□□□ -0.66
TPM3-207ENST00000341372 NR2E1Q9Y466 385 aa10.96□□□□□ -0.66
TPM3-207ENST00000341372 PTPRDP23468 1912 aa10.96□□□□□ -0.66
TPM3-207ENST00000341372 XYLBO75191 536 aa10.95□□□□□ -0.66
TPM3-207ENST00000341372 TACC1O75410 805 aa10.95□□□□□ -0.66
TPM3-207ENST00000341372 EPB41P11171 864 aaKnown RBP10.95□□□□□ -0.66
TPM3-207ENST00000341372 WARSP23381 471 aaKnown RBP10.95□□□□□ -0.66
TPM3-207ENST00000341372 ELF1P32519 619 aa10.95□□□□□ -0.66
TPM3-207ENST00000341372 ARPP19P56211 112 aa10.95□□□□□ -0.66
TPM3-207ENST00000341372 MYL6P60660 151 aa10.95□□□□□ -0.66
TPM3-207ENST00000341372 ADCY1Q08828 1119 aa10.95□□□□□ -0.66
TPM3-207ENST00000341372 CAMK4Q16566 473 aa10.95□□□□□ -0.66
TPM3-207ENST00000341372 TMEM95Q3KNT9 176 aa10.95□□□□□ -0.66
TPM3-207ENST00000341372 CAVIN1Q6NZI2 390 aaKnown RBP10.95□□□□□ -0.66
TPM3-207ENST00000341372 SV2AQ7L0J3 742 aa10.95□□□□□ -0.66
TPM3-207ENST00000341372 C2orf15Q8WU43 125 aaKnown RBP10.95□□□□□ -0.66
TPM3-207ENST00000341372 ACBD6Q9BR61 282 aa10.95□□□□□ -0.66
TPM3-207ENST00000341372 CRISPLD1Q9H336 500 aa10.95□□□□□ -0.66
TPM3-207ENST00000341372 CYP4F11Q9HBI6 524 aa10.95□□□□□ -0.66
TPM3-207ENST00000341372 MRPS23Q9Y3D9 190 aaKnown RBP10.95□□□□□ -0.66
TPM3-207ENST00000341372 YIPF1Q9Y548 306 aa10.95□□□□□ -0.66
TPM3-207ENST00000341372 CFAP69A5D8W1 941 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 C2CD4DB7Z1M9 353 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 BIN1O00499 593 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 ENC1O14682 589 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 KRT13P13646 458 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 GTF2H1P32780 548 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 LHX1P48742 406 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 SKOR1P84550 965 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 PPP3CAQ08209 521 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 TRPC3Q13507 836 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 GRAMD1BQ3KR37 738 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 ISM2Q6H9L7 571 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 ZDHHC14Q8IZN3 488 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 RIN3Q8TB24 985 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 TAF4BQ92750 862 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 RPGRIP1Q96KN7 1286 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 CEP63Q96MT8 703 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 NUP62CLQ9H1M0 184 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 TMEM8AQ9HCN3 771 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 BICDL2A1A5D9 508 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 PRRG1O14668 218 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 CCL16O15467 120 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 N4BP1O75113 896 aaKnown RBP10.94□□□□□ -0.66
TPM3-207ENST00000341372 ASS1P00966 412 aaKnown RBP10.94□□□□□ -0.66
TPM3-207ENST00000341372 TRIM49P0CI25 452 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 TRIM49CP0CI26 452 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 GRNP28799 593 aaKnown RBP10.94□□□□□ -0.66
TPM3-207ENST00000341372 MYL7Q01449 175 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 PAK1Q13153 545 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 CLN3Q13286 438 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 BIRC3Q13489 604 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 ZNF699Q32M78 642 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 ACBD5Q5T8D3 534 aaPredicted RBP10.94□□□□□ -0.66
TPM3-207ENST00000341372 NXNQ6DKJ4 435 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 OTOP3Q7RTS5 596 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 LRRTM3Q86VH5 581 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 TDRD5Q8NAT2 981 aaKnown RBP10.94□□□□□ -0.66
TPM3-207ENST00000341372 SPPL2BQ8TCT7 592 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 NELFBQ8WX92 580 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 ZNF669Q96BR6 464 aaPredicted RBP10.94□□□□□ -0.66
TPM3-207ENST00000341372 CDK15Q96Q40 435 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 PIDD1Q9HB75 910 aa10.94□□□□□ -0.66
TPM3-207ENST00000341372 DDX43Q9NXZ2 648 aaKnown RBP10.94□□□□□ -0.66
TPM3-207ENST00000341372 TMEM238LA0A1B0GVL6 79 aa10.93□□□□□ -0.66
TPM3-207ENST00000341372 UPK3BL1B0FP48 263 aa10.93□□□□□ -0.66
TPM3-207ENST00000341372 UPK3BL2E5RIL1 263 aa10.93□□□□□ -0.66
TPM3-207ENST00000341372 RFPL3O75679 317 aa10.93□□□□□ -0.66
TPM3-207ENST00000341372 LRG1P02750 347 aa10.93□□□□□ -0.66
TPM3-207ENST00000341372 PCSK1P29120 753 aa10.93□□□□□ -0.66
TPM3-207ENST00000341372 EPHA5P54756 1037 aa10.93□□□□□ -0.66
TPM3-207ENST00000341372 TSPY1Q01534 308 aa10.93□□□□□ -0.66
TPM3-207ENST00000341372 PLD1Q13393 1074 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms