RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 PDE6CP51160 858 aa17.48■□□□□ 0.39
NECTIN1-202ENST00000340882 CACNA2D1P54289 1103 aa17.48■□□□□ 0.39
NECTIN1-202ENST00000340882 KCNA1Q09470 495 aa17.48■□□□□ 0.39
NECTIN1-202ENST00000340882 GRIK2Q13002 908 aa17.48■□□□□ 0.39
NECTIN1-202ENST00000340882 SLFN12LQ6IEE8 588 aa17.48■□□□□ 0.39
NECTIN1-202ENST00000340882 NT5DC4Q86YG4 428 aa17.48■□□□□ 0.39
NECTIN1-202ENST00000340882 RGL4Q8IZJ4 473 aa17.48■□□□□ 0.39
NECTIN1-202ENST00000340882 CSGALNACT2Q8N6G5 542 aa17.48■□□□□ 0.39
NECTIN1-202ENST00000340882 GLIS3Q8NEA6 775 aa17.48■□□□□ 0.39
NECTIN1-202ENST00000340882 POMGNT1Q8WZA1 660 aa17.48■□□□□ 0.39
NECTIN1-202ENST00000340882 SAAL1Q96ER3 474 aa17.48■□□□□ 0.39
NECTIN1-202ENST00000340882 ZNF419Q96HQ0 510 aaPredicted RBP17.48■□□□□ 0.39
NECTIN1-202ENST00000340882 SYT15Q9BQS2 421 aa17.48■□□□□ 0.39
NECTIN1-202ENST00000340882 FAM213AQ9BRX8 229 aa17.48■□□□□ 0.39
NECTIN1-202ENST00000340882 TMEM30AQ9NV96 361 aa17.48■□□□□ 0.39
NECTIN1-202ENST00000340882 TOR4AQ9NXH8 423 aa17.48■□□□□ 0.39
NECTIN1-202ENST00000340882 KNL1Q8NG31 2342 aa17.48■□□□□ 0.39
NECTIN1-202ENST00000340882 TENM4Q6N022 2769 aa17.47■□□□□ 0.39
NECTIN1-202ENST00000340882 EIF4E1BA6NMX2 242 aaKnown RBP17.47■□□□□ 0.39
NECTIN1-202ENST00000340882 CYSRT1A8MQ03 144 aa17.47■□□□□ 0.39
NECTIN1-202ENST00000340882 TULP3O75386 442 aa17.47■□□□□ 0.39
NECTIN1-202ENST00000340882 C1QL1O75973 258 aa17.47■□□□□ 0.39
NECTIN1-202ENST00000340882 SCP2P22307 547 aa17.47■□□□□ 0.39
NECTIN1-202ENST00000340882 PCSK1P29120 753 aa17.47■□□□□ 0.39
NECTIN1-202ENST00000340882 LHX1P48742 406 aa17.47■□□□□ 0.39
NECTIN1-202ENST00000340882 POU5F1Q01860 360 aaKnown RBP17.47■□□□□ 0.39
NECTIN1-202ENST00000340882 C10orf76Q5T2E6 689 aa17.47■□□□□ 0.39
NECTIN1-202ENST00000340882 EGFLAMQ63HQ2 1017 aa17.47■□□□□ 0.39
NECTIN1-202ENST00000340882 GLRX5Q86SX6 157 aa17.47■□□□□ 0.39
NECTIN1-202ENST00000340882 TOP6BLQ8N6T0 577 aa17.47■□□□□ 0.39
NECTIN1-202ENST00000340882 LRRC52Q8N7C0 313 aa17.47■□□□□ 0.39
NECTIN1-202ENST00000340882 KIAA1958Q8N8K9 716 aa17.47■□□□□ 0.39
NECTIN1-202ENST00000340882 SPRYD3Q8NCJ5 442 aa17.47■□□□□ 0.39
NECTIN1-202ENST00000340882 ZFRQ96KR1 1074 aaKnown RBP17.47■□□□□ 0.39
NECTIN1-202ENST00000340882 LIMCH1Q9UPQ0 1083 aa17.47■□□□□ 0.39
NECTIN1-202ENST00000340882 APOBEC2Q9Y235 224 aaKnown RBP17.47■□□□□ 0.39
NECTIN1-202ENST00000340882 NME7Q9Y5B8 376 aa17.47■□□□□ 0.39
NECTIN1-202ENST00000340882 MYH10P35580 1976 aa17.46■□□□□ 0.39
NECTIN1-202ENST00000340882 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.46■□□□□ 0.39
NECTIN1-202ENST00000340882 KRT19P08727 400 aa17.46■□□□□ 0.39
NECTIN1-202ENST00000340882 PDGFRBP09619 1106 aa17.46■□□□□ 0.39
NECTIN1-202ENST00000340882 MBL2P11226 248 aaPredicted RBP17.46■□□□□ 0.39
NECTIN1-202ENST00000340882 NTSR1P30989 418 aa17.46■□□□□ 0.39
NECTIN1-202ENST00000340882 GAD2Q05329 585 aa17.46■□□□□ 0.39
NECTIN1-202ENST00000340882 CYP4F3Q08477 520 aa17.46■□□□□ 0.39
NECTIN1-202ENST00000340882 TAF10Q12962 218 aa17.46■□□□□ 0.39
NECTIN1-202ENST00000340882 VSTM1Q6UX27 236 aa17.46■□□□□ 0.39
NECTIN1-202ENST00000340882 C4orf50Q6ZRC1 276 aa17.46■□□□□ 0.39
NECTIN1-202ENST00000340882 TMPRSS7Q7RTY8 843 aa17.46■□□□□ 0.39
NECTIN1-202ENST00000340882 LIMS2Q7Z4I7 341 aa17.46■□□□□ 0.39
NECTIN1-202ENST00000340882 BRSK2Q8IWQ3 736 aa17.46■□□□□ 0.39
NECTIN1-202ENST00000340882 TERB1Q8NA31 727 aa17.46■□□□□ 0.39
NECTIN1-202ENST00000340882 FAM184AQ8NB25 1140 aa17.46■□□□□ 0.39
NECTIN1-202ENST00000340882 IPO4Q8TEX9 1081 aaKnown RBP17.46■□□□□ 0.39
NECTIN1-202ENST00000340882 ST6GALNAC4Q9H4F1 302 aa17.46■□□□□ 0.39
NECTIN1-202ENST00000340882 DKK4Q9UBT3 224 aa17.46■□□□□ 0.39
NECTIN1-202ENST00000340882 RAD54BQ9Y620 910 aa17.46■□□□□ 0.39
NECTIN1-202ENST00000340882 CABIN1Q9Y6J0 2220 aa17.45■□□□□ 0.38
NECTIN1-202ENST00000340882 F8VP50 259 aa17.45■□□□□ 0.38
NECTIN1-202ENST00000340882 PPP1R37O75864 691 aa17.45■□□□□ 0.38
NECTIN1-202ENST00000340882 KRT18P05783 430 aaKnown RBP17.45■□□□□ 0.38
NECTIN1-202ENST00000340882 ATXN1LP0C7T5 689 aaKnown RBP17.45■□□□□ 0.38
NECTIN1-202ENST00000340882 HMGN5P82970 282 aaKnown RBP17.45■□□□□ 0.38
NECTIN1-202ENST00000340882 BNC1Q01954 994 aa17.45■□□□□ 0.38
NECTIN1-202ENST00000340882 CYP27A1Q02318 531 aa17.45■□□□□ 0.38
NECTIN1-202ENST00000340882 ZNF720Q7Z2F6 126 aa17.45■□□□□ 0.38
NECTIN1-202ENST00000340882 TMEM25Q86YD3 366 aa17.45■□□□□ 0.38
NECTIN1-202ENST00000340882 BAHD1Q8TBE0 780 aaPredicted RBP17.45■□□□□ 0.38
NECTIN1-202ENST00000340882 PCED1BQ96HM7 432 aa17.45■□□□□ 0.38
NECTIN1-202ENST00000340882 STRA6Q9BX79 667 aa17.45■□□□□ 0.38
NECTIN1-202ENST00000340882 TRIM9Q9C026 710 aa17.45■□□□□ 0.38
NECTIN1-202ENST00000340882 MTMR12Q9C0I1 747 aa17.45■□□□□ 0.38
NECTIN1-202ENST00000340882 KIAA1522Q9P206 1035 aaPredicted RBP17.45■□□□□ 0.38
NECTIN1-202ENST00000340882 CDH9Q9ULB4 789 aa17.45■□□□□ 0.38
NECTIN1-202ENST00000340882 GOLGA8IPA6NC78 632 aa17.44■□□□□ 0.38
NECTIN1-202ENST00000340882 TRABD2BA6NFA1 517 aa17.44■□□□□ 0.38
NECTIN1-202ENST00000340882 GOLGA8JA6NMD2 632 aa17.44■□□□□ 0.38
NECTIN1-202ENST00000340882 HOXC11O43248 304 aaPredicted RBP17.44■□□□□ 0.38
NECTIN1-202ENST00000340882 DKK1O94907 266 aa17.44■□□□□ 0.38
NECTIN1-202ENST00000340882 NOP14P78316 857 aaKnown RBP17.44■□□□□ 0.38
NECTIN1-202ENST00000340882 IFRD2Q12894 506 aaPredicted RBP17.44■□□□□ 0.38
NECTIN1-202ENST00000340882 CAMK2BQ13554 666 aa17.44■□□□□ 0.38
NECTIN1-202ENST00000340882 TRMT11Q7Z4G4 463 aaKnown RBP17.44■□□□□ 0.38
NECTIN1-202ENST00000340882 SFR1Q86XK3 245 aa17.44■□□□□ 0.38
NECTIN1-202ENST00000340882 BBS7Q8IWZ6 715 aa17.44■□□□□ 0.38
NECTIN1-202ENST00000340882 KCNV2Q8TDN2 545 aa17.44■□□□□ 0.38
NECTIN1-202ENST00000340882 SETD7Q8WTS6 366 aaKnown RBP17.44■□□□□ 0.38
NECTIN1-202ENST00000340882 RAD54LQ92698 747 aa17.44■□□□□ 0.38
NECTIN1-202ENST00000340882 FAM124BQ9H5Z6 455 aaPredicted RBP17.44■□□□□ 0.38
NECTIN1-202ENST00000340882 PDE11AQ9HCR9 933 aa17.44■□□□□ 0.38
NECTIN1-202ENST00000340882 TBC1D14Q9P2M4 693 aa17.44■□□□□ 0.38
NECTIN1-202ENST00000340882 DEC1Q9P2X7 70 aa17.44■□□□□ 0.38
NECTIN1-202ENST00000340882 ITGA11Q9UKX5 1188 aa17.44■□□□□ 0.38
NECTIN1-202ENST00000340882 STARD13Q9Y3M8 1113 aa17.44■□□□□ 0.38
NECTIN1-202ENST00000340882 CFAP46Q8IYW2 2715 aa17.44■□□□□ 0.38
NECTIN1-202ENST00000340882 PTPRJQ12913 1337 aa17.44■□□□□ 0.38
NECTIN1-202ENST00000340882 MAST4O15021 2626 aa17.43■□□□□ 0.38
NECTIN1-202ENST00000340882 E2F8A0AVK6 867 aa17.43■□□□□ 0.38
NECTIN1-202ENST00000340882 FAM149AA5PLN7 773 aa17.43■□□□□ 0.38
NECTIN1-202ENST00000340882 PRRT4C9JH25 899 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms