RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 SOX4Q06945 474 aaPredicted RBP15.8■□□□□ 0.12
BRAT1-201ENST00000340611 RCN2Q14257 317 aa15.8■□□□□ 0.12
BRAT1-201ENST00000340611 LPIN1Q14693 890 aa15.8■□□□□ 0.12
BRAT1-201ENST00000340611 MBTPS1Q14703 1052 aa15.8■□□□□ 0.12
BRAT1-201ENST00000340611 DNAJC9Q8WXX5 260 aa15.8■□□□□ 0.12
BRAT1-201ENST00000340611 SLX1AQ9BQ83 275 aa15.8■□□□□ 0.12
BRAT1-201ENST00000340611 ERP44Q9BS26 406 aa15.8■□□□□ 0.12
BRAT1-201ENST00000340611 RAB17Q9H0T7 212 aa15.8■□□□□ 0.12
BRAT1-201ENST00000340611 HCRTO43612 131 aa15.79■□□□□ 0.12
BRAT1-201ENST00000340611 IL18RAPO95256 599 aa15.79■□□□□ 0.12
BRAT1-201ENST00000340611 ZNF24P17028 368 aa15.79■□□□□ 0.12
BRAT1-201ENST00000340611 C1QTNF8P60827 252 aa15.79■□□□□ 0.12
BRAT1-201ENST00000340611 CDC42EP1Q00587 391 aa15.79■□□□□ 0.12
BRAT1-201ENST00000340611 GCNT1Q02742 428 aa15.79■□□□□ 0.12
BRAT1-201ENST00000340611 SFSWAPQ12872 951 aaKnown RBP15.79■□□□□ 0.12
BRAT1-201ENST00000340611 ARHGEF6Q15052 776 aa15.79■□□□□ 0.12
BRAT1-201ENST00000340611 DCAF4L1Q3SXM0 396 aa15.79■□□□□ 0.12
BRAT1-201ENST00000340611 DPH6Q7L8W6 267 aa15.79■□□□□ 0.12
BRAT1-201ENST00000340611 SLC35G2Q8TBE7 412 aa15.79■□□□□ 0.12
BRAT1-201ENST00000340611 CENPTQ96BT3 561 aa15.79■□□□□ 0.12
BRAT1-201ENST00000340611 SNX27Q96L92 541 aa15.79■□□□□ 0.12
BRAT1-201ENST00000340611 PABPC3Q9H361 631 aaKnown RBP15.79■□□□□ 0.12
BRAT1-201ENST00000340611 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.79■□□□□ 0.12
BRAT1-201ENST00000340611 PCDHB2Q9Y5E7 798 aa15.79■□□□□ 0.12
BRAT1-201ENST00000340611 PQBP1O60828 265 aaKnown RBP15.79■□□□□ 0.12
BRAT1-201ENST00000340611 CKBP12277 381 aa15.79■□□□□ 0.12
BRAT1-201ENST00000340611 FMO1Q01740 532 aa15.79■□□□□ 0.12
BRAT1-201ENST00000340611 ZRSR2Q15696 482 aaKnown RBP15.79■□□□□ 0.12
BRAT1-201ENST00000340611 TRIM71Q2Q1W2 868 aaKnown RBP15.79■□□□□ 0.12
BRAT1-201ENST00000340611 FBXO47Q5MNV8 452 aa15.79■□□□□ 0.12
BRAT1-201ENST00000340611 DUPD1Q68J44 220 aa15.79■□□□□ 0.12
BRAT1-201ENST00000340611 VPS36Q86VN1 386 aa15.79■□□□□ 0.12
BRAT1-201ENST00000340611 SYCE1Q8N0S2 351 aa15.79■□□□□ 0.12
BRAT1-201ENST00000340611 ARHGEF26Q96DR7 871 aa15.79■□□□□ 0.12
BRAT1-201ENST00000340611 MLXIPLQ9NP71 852 aa15.79■□□□□ 0.12
BRAT1-201ENST00000340611 KBTBD13C9JR72 458 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 MLH1P40692 756 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 ASPAP45381 313 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 YARSP54577 528 aaKnown RBP15.78■□□□□ 0.12
BRAT1-201ENST00000340611 ITIH4Q14624 930 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 LCA5Q86VQ0 697 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 RBBP8NLQ8NC74 664 aaPredicted RBP15.78■□□□□ 0.12
BRAT1-201ENST00000340611 DIS3LQ8TF46 1054 aaKnown RBP15.78■□□□□ 0.12
BRAT1-201ENST00000340611 NUDCD1Q96RS6 583 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 THAP2Q9H0W7 228 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 ETNK1Q9HBU6 452 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 CISHQ9NSE2 258 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 SMIM28A0A1B0GU29 152 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 CACNA2D1P54289 1103 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 SGSM1Q2NKQ1 1148 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 ZDHHC24Q6UX98 284 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 JAMLQ86YT9 394 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 CPA5Q8WXQ8 436 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 DDX1Q92499 740 aaKnown RBP15.78■□□□□ 0.12
BRAT1-201ENST00000340611 C18orf8Q96DM3 657 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 DDX27Q96GQ7 796 aaKnown RBP15.78■□□□□ 0.12
BRAT1-201ENST00000340611 HPDLQ96IR7 371 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 TWNKQ96RR1 684 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 GAD1Q99259 594 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 LPIN3Q9BQK8 851 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 MIOSQ9NXC5 875 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 RANBP2P49792 3224 aaKnown RBP15.78■□□□□ 0.12
BRAT1-201ENST00000340611 MOXD2PA6NHM9 499 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 DDX3YO15523 660 aaKnown RBP15.78■□□□□ 0.12
BRAT1-201ENST00000340611 ZCCHC18P0CG32 403 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 GNAZP19086 355 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 RFX1P22670 979 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 SURF1Q15526 300 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 TSNAXIP1Q2TAA8 658 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 RINLQ6ZS11 566 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 DNAJC5GQ8N7S2 189 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 ZSWIM1Q9BR11 485 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 ASB7Q9H672 318 aa15.78■□□□□ 0.12
BRAT1-201ENST00000340611 FOXO6A8MYZ6 492 aa15.77■□□□□ 0.12
BRAT1-201ENST00000340611 PTDSS1P48651 473 aaKnown RBP15.77■□□□□ 0.12
BRAT1-201ENST00000340611 PDE6CP51160 858 aa15.77■□□□□ 0.12
BRAT1-201ENST00000340611 ZC3H18Q86VM9 953 aaKnown RBP15.77■□□□□ 0.12
BRAT1-201ENST00000340611 ALG3Q92685 438 aa15.77■□□□□ 0.12
BRAT1-201ENST00000340611 NIF3L1Q9GZT8 377 aa15.77■□□□□ 0.12
BRAT1-201ENST00000340611 CARD9Q9H257 536 aa15.77■□□□□ 0.12
BRAT1-201ENST00000340611 DMAP1Q9NPF5 467 aaPredicted RBP15.77■□□□□ 0.12
BRAT1-201ENST00000340611 FAM105AQ9NUU6 356 aa15.77■□□□□ 0.12
BRAT1-201ENST00000340611 INTUQ9ULD6 942 aa15.77■□□□□ 0.12
BRAT1-201ENST00000340611 FTLP02792 175 aaPredicted RBP15.77■□□□□ 0.11
BRAT1-201ENST00000340611 HNRNPCP07910 306 aaKnown RBP eCLIP15.77■□□□□ 0.11
BRAT1-201ENST00000340611 NUDT17P0C025 328 aa15.77■□□□□ 0.11
BRAT1-201ENST00000340611 UBTFL6P0CB48 400 aaPredicted RBP15.77■□□□□ 0.11
BRAT1-201ENST00000340611 ZNF667Q5HYK9 610 aa15.77■□□□□ 0.11
BRAT1-201ENST00000340611 CCDC25Q86WR0 208 aa15.77■□□□□ 0.11
BRAT1-201ENST00000340611 RNF168Q8IYW5 571 aaPredicted RBP15.77■□□□□ 0.11
BRAT1-201ENST00000340611 TTC8Q8TAM2 541 aa15.77■□□□□ 0.11
BRAT1-201ENST00000340611 PGM2Q96G03 612 aa15.77■□□□□ 0.11
BRAT1-201ENST00000340611 ADAM2Q99965 735 aa15.77■□□□□ 0.11
BRAT1-201ENST00000340611 PAK6Q9NQU5 681 aaPredicted RBP15.77■□□□□ 0.11
BRAT1-201ENST00000340611 ETNK2Q9NVF9 386 aa15.77■□□□□ 0.11
BRAT1-201ENST00000340611 NENFQ9UMX5 172 aa15.77■□□□□ 0.11
BRAT1-201ENST00000340611 TMEM110-MUSTN1A8MSY1 372 aa15.76■□□□□ 0.11
BRAT1-201ENST00000340611 PTGESO14684 152 aa15.76■□□□□ 0.11
BRAT1-201ENST00000340611 ZC3H11AO75152 810 aaKnown RBP eCLIP15.76■□□□□ 0.11
BRAT1-201ENST00000340611 CALB2P22676 271 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms