RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 USP17L7P0C7H9 530 aa16.08■□□□□ 0.16
UBE3B-201ENST00000340074 ZDHHC11BP0C7U3 371 aa16.08■□□□□ 0.16
UBE3B-201ENST00000340074 PNMA6AP0CW24 399 aaPredicted RBP16.08■□□□□ 0.16
UBE3B-201ENST00000340074 GNA15P30679 374 aa16.08■□□□□ 0.16
UBE3B-201ENST00000340074 GDI1P31150 447 aa16.08■□□□□ 0.16
UBE3B-201ENST00000340074 DRAP1Q14919 205 aaPredicted RBP16.08■□□□□ 0.16
UBE3B-201ENST00000340074 SYCP1Q15431 976 aa16.08■□□□□ 0.16
UBE3B-201ENST00000340074 STILQ15468 1287 aa16.08■□□□□ 0.16
UBE3B-201ENST00000340074 RAB41Q5JT25 222 aa16.08■□□□□ 0.16
UBE3B-201ENST00000340074 SNX30Q5VWJ9 437 aa16.08■□□□□ 0.16
UBE3B-201ENST00000340074 CELF5Q8N6W0 485 aaKnown RBP16.08■□□□□ 0.16
UBE3B-201ENST00000340074 DEPDC1BQ8WUY9 529 aa16.08■□□□□ 0.16
UBE3B-201ENST00000340074 ZNF606Q8WXB4 792 aa16.08■□□□□ 0.16
UBE3B-201ENST00000340074 SECISBP2LQ93073 1101 aaKnown RBP16.08■□□□□ 0.16
UBE3B-201ENST00000340074 C1QTNF1Q9BXJ1 281 aa16.08■□□□□ 0.16
UBE3B-201ENST00000340074 NAA15Q9BXJ9 866 aaKnown RBP16.08■□□□□ 0.16
UBE3B-201ENST00000340074 RNF38Q9H0F5 515 aa16.08■□□□□ 0.16
UBE3B-201ENST00000340074 PLCB1Q9NQ66 1216 aa16.08■□□□□ 0.16
UBE3B-201ENST00000340074 FAM207AQ9NSI2 230 aaPredicted RBP16.08■□□□□ 0.16
UBE3B-201ENST00000340074 TDP1Q9NUW8 608 aa16.08■□□□□ 0.16
UBE3B-201ENST00000340074 OBP2AQ9NY56 170 aa16.08■□□□□ 0.16
UBE3B-201ENST00000340074 FBXL21Q9UKT6 434 aa16.08■□□□□ 0.16
UBE3B-201ENST00000340074 SCML2Q9UQR0 700 aa16.08■□□□□ 0.16
UBE3B-201ENST00000340074 SIK3Q9Y2K2 1263 aa16.08■□□□□ 0.16
UBE3B-201ENST00000340074 USP3Q9Y6I4 520 aa16.08■□□□□ 0.16
UBE3B-201ENST00000340074 MIA3Q5JRA6 1907 aa16.07■□□□□ 0.16
UBE3B-201ENST00000340074 THAP12O43422 761 aa16.07■□□□□ 0.16
UBE3B-201ENST00000340074 GPR37L1O60883 481 aa16.07■□□□□ 0.16
UBE3B-201ENST00000340074 CAVIN2O95810 425 aa16.07■□□□□ 0.16
UBE3B-201ENST00000340074 OAS1P00973 400 aaKnown RBP16.07■□□□□ 0.16
UBE3B-201ENST00000340074 SETSIPP0DME0 302 aa16.07■□□□□ 0.16
UBE3B-201ENST00000340074 PFKLP17858 780 aa16.07■□□□□ 0.16
UBE3B-201ENST00000340074 RFX1P22670 979 aa16.07■□□□□ 0.16
UBE3B-201ENST00000340074 PLA2G4AP47712 749 aa16.07■□□□□ 0.16
UBE3B-201ENST00000340074 PDE6CP51160 858 aa16.07■□□□□ 0.16
UBE3B-201ENST00000340074 FCHO2Q0JRZ9 810 aa16.07■□□□□ 0.16
UBE3B-201ENST00000340074 ZNF268Q14587 947 aaPredicted RBP16.07■□□□□ 0.16
UBE3B-201ENST00000340074 SLC35F5Q8WV83 523 aa16.07■□□□□ 0.16
UBE3B-201ENST00000340074 PCMTD1Q96MG8 357 aaPredicted RBP16.07■□□□□ 0.16
UBE3B-201ENST00000340074 GANQ9H2C0 597 aa16.07■□□□□ 0.16
UBE3B-201ENST00000340074 BRD9Q9H8M2 597 aa16.07■□□□□ 0.16
UBE3B-201ENST00000340074 TLR8Q9NR97 1041 aaKnown RBP16.07■□□□□ 0.16
UBE3B-201ENST00000340074 WNT16Q9UBV4 365 aa16.07■□□□□ 0.16
UBE3B-201ENST00000340074 CA14Q9ULX7 337 aa16.07■□□□□ 0.16
UBE3B-201ENST00000340074 EPHB6O15197 1021 aa16.06■□□□□ 0.16
UBE3B-201ENST00000340074 MED7O43513 233 aa16.06■□□□□ 0.16
UBE3B-201ENST00000340074 CLCN1P35523 988 aa16.06■□□□□ 0.16
UBE3B-201ENST00000340074 TKTL1P51854 596 aa16.06■□□□□ 0.16
UBE3B-201ENST00000340074 TMEM31Q5JXX7 168 aa16.06■□□□□ 0.16
UBE3B-201ENST00000340074 HECTD3Q5T447 861 aa16.06■□□□□ 0.16
UBE3B-201ENST00000340074 IER5LQ5T953 404 aa16.06■□□□□ 0.16
UBE3B-201ENST00000340074 CCDC186Q7Z3E2 898 aa16.06■□□□□ 0.16
UBE3B-201ENST00000340074 YAF2Q8IY57 180 aa16.06■□□□□ 0.16
UBE3B-201ENST00000340074 FAM71AQ8IYT1 594 aa16.06■□□□□ 0.16
UBE3B-201ENST00000340074 TTC16Q8NEE8 873 aa16.06■□□□□ 0.16
UBE3B-201ENST00000340074 RIN3Q8TB24 985 aa16.06■□□□□ 0.16
UBE3B-201ENST00000340074 BPIFB1Q8TDL5 484 aa16.06■□□□□ 0.16
UBE3B-201ENST00000340074 ERGIC2Q96RQ1 377 aa16.06■□□□□ 0.16
UBE3B-201ENST00000340074 CCSER2Q9H7U1 834 aa16.06■□□□□ 0.16
UBE3B-201ENST00000340074 KIF9Q9HAQ2 790 aa16.06■□□□□ 0.16
UBE3B-201ENST00000340074 NMUR1Q9HB89 426 aa16.06■□□□□ 0.16
UBE3B-201ENST00000340074 RTN4Q9NQC3 1192 aaKnown RBP16.06■□□□□ 0.16
UBE3B-201ENST00000340074 OSER1Q9NX31 292 aa16.06■□□□□ 0.16
UBE3B-201ENST00000340074 MYOFQ9NZM1 2061 aa16.06■□□□□ 0.16
UBE3B-201ENST00000340074 KMT2EQ8IZD2 1858 aa16.06■□□□□ 0.16
UBE3B-201ENST00000340074 WDFY4Q6ZS81 3184 aa16.05■□□□□ 0.16
UBE3B-201ENST00000340074 A0A1W2PQH9 124 aa16.05■□□□□ 0.16
UBE3B-201ENST00000340074 KRBA1A5PL33 1030 aa16.05■□□□□ 0.16
UBE3B-201ENST00000340074 ZNF263O14978 683 aa16.05■□□□□ 0.16
UBE3B-201ENST00000340074 TEX33O43247 280 aa16.05■□□□□ 0.16
UBE3B-201ENST00000340074 COCHO43405 550 aa16.05■□□□□ 0.16
UBE3B-201ENST00000340074 OLFM2O95897 454 aa16.05■□□□□ 0.16
UBE3B-201ENST00000340074 PDGFBP01127 241 aaPredicted RBP16.05■□□□□ 0.16
UBE3B-201ENST00000340074 RGS7P49802 495 aa16.05■□□□□ 0.16
UBE3B-201ENST00000340074 POLR2FP61218 127 aaKnown RBP16.05■□□□□ 0.16
UBE3B-201ENST00000340074 TPM4P67936 248 aa16.05■□□□□ 0.16
UBE3B-201ENST00000340074 SLC7A9P82251 487 aa16.05■□□□□ 0.16
UBE3B-201ENST00000340074 ZXDBP98169 803 aa16.05■□□□□ 0.16
UBE3B-201ENST00000340074 PFKPQ01813 784 aa16.05■□□□□ 0.16
UBE3B-201ENST00000340074 PTK2Q05397 1052 aa16.05■□□□□ 0.16
UBE3B-201ENST00000340074 ADIGQ0VDE8 80 aa16.05■□□□□ 0.16
UBE3B-201ENST00000340074 SMYD5Q6GMV2 418 aa16.05■□□□□ 0.16
UBE3B-201ENST00000340074 PMF1Q6P1K2 205 aa16.05■□□□□ 0.16
UBE3B-201ENST00000340074 DENND1BQ6P3S1 775 aa16.05■□□□□ 0.16
UBE3B-201ENST00000340074 HFE2Q6ZVN8 426 aa16.05■□□□□ 0.16
UBE3B-201ENST00000340074 SLC47A2Q86VL8 602 aa16.05■□□□□ 0.16
UBE3B-201ENST00000340074 SIX5Q8N196 739 aa16.05■□□□□ 0.16
UBE3B-201ENST00000340074 KCTD13Q8WZ19 329 aa16.05■□□□□ 0.16
UBE3B-201ENST00000340074 IRF7Q92985 503 aa16.05■□□□□ 0.16
UBE3B-201ENST00000340074 ZFYVE19Q96K21 471 aa16.05■□□□□ 0.16
UBE3B-201ENST00000340074 STK33Q9BYT3 514 aa16.05■□□□□ 0.16
UBE3B-201ENST00000340074 LRRC4Q9HBW1 653 aa16.05■□□□□ 0.16
UBE3B-201ENST00000340074 ARHGAP26Q9UNA1 814 aa16.05■□□□□ 0.16
UBE3B-201ENST00000340074 PRR33A8MZF0 331 aa16.04■□□□□ 0.16
UBE3B-201ENST00000340074 F8VZ95 297 aa16.04■□□□□ 0.16
UBE3B-201ENST00000340074 GOLGA6L19H0YKK7 550 aa16.04■□□□□ 0.16
UBE3B-201ENST00000340074 ARNTLO00327 626 aa16.04■□□□□ 0.16
UBE3B-201ENST00000340074 PIK3R2O00459 728 aa16.04■□□□□ 0.16
UBE3B-201ENST00000340074 CHADO15335 359 aa16.04■□□□□ 0.16
UBE3B-201ENST00000340074 TLR5O60602 858 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms