RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 TRIM39Q9HCM9 518 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 ANAPC5Q9UJX4 755 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 RWDD3Q9Y3V2 267 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 COL4A3BPQ9Y5P4 624 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 CPQQ9Y646 472 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 PXDNQ92626 1479 aa10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 MYMKA6NI61 221 aa10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 GOLGA8JA6NMD2 632 aa10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 ENPP3O14638 875 aa10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 NDUFS2O75306 463 aa10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 USP12O75317 370 aa10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 CTNNA2P26232 953 aa10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 IDUAP35475 653 aa10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 CPOXP36551 454 aa10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 ALDH3B2P48448 385 aa10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 PRAMEP78395 509 aa10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 CLCQ05315 142 aa10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 COBLL1Q53SF7 1204 aa10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 ZNF618Q5T7W0 954 aa10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 CNNM4Q6P4Q7 775 aa10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 RHBDF2Q6PJF5 856 aa10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 ADGRG6Q86SQ4 1221 aa10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 GLRX5Q86SX6 157 aa10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 ARID3BQ8IVW6 561 aaPredicted RBP10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 ZNF276Q8N554 614 aa10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 ALPK1Q96QP1 1244 aa10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 PSKH2Q96QS6 385 aa10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 EBF4Q9BQW3 602 aa10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 STN1Q9H668 368 aaKnown RBP10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 RPF2Q9H7B2 306 aaKnown RBP10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 SAYSD1Q9NPB0 183 aa10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 POMPQ9Y244 141 aa10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 BCS1LQ9Y276 419 aa10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 MTO1Q9Y2Z2 717 aaKnown RBP10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 ALG6Q9Y672 507 aa10.02□□□□□ -0.8
PTCHD4-201ENST00000339488 LOC100653049A0A140TA62 436 aa10.02□□□□□ -0.81
PTCHD4-201ENST00000339488 PRPF4O43172 522 aaKnown RBP eCLIP10.02□□□□□ -0.813e-6■□□□□ 11
PTCHD4-201ENST00000339488 ENTPD3O75355 529 aa10.02□□□□□ -0.81
PTCHD4-201ENST00000339488 SCO1O75880 301 aa10.02□□□□□ -0.81
PTCHD4-201ENST00000339488 KRT34O76011 436 aa10.02□□□□□ -0.81
PTCHD4-201ENST00000339488 UCHL3P15374 230 aa10.02□□□□□ -0.81
PTCHD4-201ENST00000339488 EPHA3P29320 983 aa10.02□□□□□ -0.81
PTCHD4-201ENST00000339488 HADHAP40939 763 aa10.02□□□□□ -0.81
PTCHD4-201ENST00000339488 STILQ15468 1287 aa10.02□□□□□ -0.81
PTCHD4-201ENST00000339488 PPP1R3AQ16821 1122 aa10.02□□□□□ -0.81
PTCHD4-201ENST00000339488 ATAD3BQ5T9A4 648 aa10.02□□□□□ -0.81
PTCHD4-201ENST00000339488 ANKRD26P1Q6NSI1 321 aa10.02□□□□□ -0.81
PTCHD4-201ENST00000339488 GALNT13Q8IUC8 556 aa10.02□□□□□ -0.81
PTCHD4-201ENST00000339488 PQLC1Q8N2U9 271 aa10.02□□□□□ -0.81
PTCHD4-201ENST00000339488 RNF148Q8N7C7 305 aa10.02□□□□□ -0.81
PTCHD4-201ENST00000339488 BEND7Q8N7W2 519 aaPredicted RBP10.02□□□□□ -0.81
PTCHD4-201ENST00000339488 LILRB1Q8NHL6 650 aaPredicted RBP10.02□□□□□ -0.81
PTCHD4-201ENST00000339488 PPP1R14CQ8TAE6 165 aa10.02□□□□□ -0.81
PTCHD4-201ENST00000339488 FIG4Q92562 907 aa10.02□□□□□ -0.81
PTCHD4-201ENST00000339488 GLMNQ92990 594 aa10.02□□□□□ -0.81
PTCHD4-201ENST00000339488 PYM1Q9BRP8 204 aaKnown RBP10.02□□□□□ -0.81
PTCHD4-201ENST00000339488 DNMT3BQ9UBC3 853 aaKnown RBP10.02□□□□□ -0.81
PTCHD4-201ENST00000339488 GNPTGQ9UJJ9 305 aa10.02□□□□□ -0.81
PTCHD4-201ENST00000339488 PSMC3P17980 439 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 SLC1A1P43005 524 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 PDIA2Q13087 525 aaKnown RBP10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 LSM12Q3MHD2 195 aaKnown RBP10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 DNAL1Q4LDG9 190 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 HERC4Q5GLZ8 1057 aaPredicted RBP10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 DCAF17Q5H9S7 520 aaPredicted RBP10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 MAMSTRQ6ZN01 415 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 HACE1Q8IYU2 909 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 PEX13Q92968 403 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 CIB1Q99828 191 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 SEMA6AQ9H2E6 1030 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 DNAJC18Q9H819 358 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 ROBO1Q9Y6N7 1651 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 ZNF532Q9HCE3 1301 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 MARF1Q9Y4F3 1742 aaKnown RBP10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 AURKAO14965 403 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 HNRNPFP52597 415 aaKnown RBP10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 THOP1P52888 689 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 BASP1P80723 227 aaKnown RBP10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 PPATQ06203 517 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 TAF12Q16514 161 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 SEL1L2Q5TEA6 688 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 MFSD6Q6ZSS7 791 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 CYFIP1Q7L576 1253 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 LYSMD3Q7Z3D4 306 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 LILRA2Q8N149 483 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 SLC7A3Q8WY07 619 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 RFFLQ8WZ73 363 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 LRGUKQ96M69 825 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 FAM111AQ96PZ2 611 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 CDK5RAP1Q96SZ6 601 aaKnown RBP10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 IL12RB2Q99665 862 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 CCDC77Q9BR77 488 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 HAUS8Q9BT25 410 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 RNF26Q9BY78 433 aaPredicted RBP10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 MTMR12Q9C0I1 747 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 HOXD1Q9GZZ0 328 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 SMARCAD1Q9H4L7 1026 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 ARMT1Q9H993 441 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 DNAJC28Q9NX36 388 aa10.01□□□□□ -0.81
PTCHD4-201ENST00000339488 TRPM3Q9HCF6 1732 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms