RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 TAB3Q8N5C8 712 aaPredicted RBP13.11□□□□□ -0.31
DFFB-202ENST00000339350 TAS1R2Q8TE23 839 aa13.11□□□□□ -0.31
DFFB-202ENST00000339350 ITPKCQ96DU7 683 aa13.11□□□□□ -0.31
DFFB-202ENST00000339350 FAM161BQ96MY7 647 aa13.11□□□□□ -0.31
DFFB-202ENST00000339350 TEKT3Q9BXF9 490 aa13.11□□□□□ -0.31
DFFB-202ENST00000339350 TMEM39BQ9GZU3 492 aa13.11□□□□□ -0.31
DFFB-202ENST00000339350 SIAEQ9HAT2 523 aa13.11□□□□□ -0.31
DFFB-202ENST00000339350 VTA1Q9NP79 307 aa13.11□□□□□ -0.31
DFFB-202ENST00000339350 ARL8BQ9NVJ2 186 aa13.11□□□□□ -0.31
DFFB-202ENST00000339350 MAD1L1Q9Y6D9 718 aa13.11□□□□□ -0.31
DFFB-202ENST00000339350 COL11A2P13942 1736 aaPredicted RBP13.11□□□□□ -0.31
DFFB-202ENST00000339350 C15orf38-AP3S2A0A0A6YYH1 394 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 HSPA6P17066 643 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 VCLP18206 1134 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 PRKACBP22694 351 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 RRM1P23921 792 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 ASPHQ12797 758 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 ZBTB17Q13105 803 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 MMEL1Q495T6 779 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 DCAF6Q58WW2 860 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 HAUS6Q7Z4H7 955 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 ARPINQ7Z6K5 226 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 MRPL1Q9BYD6 325 aaKnown RBP13.1□□□□□ -0.31
DFFB-202ENST00000339350 CLK4Q9HAZ1 481 aaKnown RBP13.1□□□□□ -0.31
DFFB-202ENST00000339350 UBN1Q9NPG3 1134 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 NINJ2Q9NZG7 142 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 ANAPC5Q9UJX4 755 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 FZD1Q9UP38 647 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 FOXD2O60548 495 aaPredicted RBP13.1□□□□□ -0.31
DFFB-202ENST00000339350 UQCRBP14927 111 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 CPA3P15088 417 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 AQP4P55087 323 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 FAM102BQ5T8I3 360 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 STRIP1Q5VSL9 837 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 TATDN1Q6P1N9 297 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 ELMSAN1Q6PJG2 1045 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 CLNKQ7Z7G1 428 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 CROCCP2Q86T23 111 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 PDSS2Q86YH6 399 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 ANKMY2Q8IV38 441 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 PYROXD1Q8WU10 500 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 PSPC1Q8WXF1 523 aaKnown RBP13.1□□□□□ -0.31
DFFB-202ENST00000339350 GMCL1Q96IK5 515 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 RUNDC3BQ96NL0 473 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 SENP6Q9GZR1 1112 aaPredicted RBP13.1□□□□□ -0.31
DFFB-202ENST00000339350 SNX25Q9H3E2 840 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 EHD1Q9H4M9 534 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 NKIRAS1Q9NYS0 192 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 RGS17Q9UGC6 210 aaPredicted RBP13.1□□□□□ -0.31
DFFB-202ENST00000339350 NAALADL1Q9UQQ1 740 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 STARD13Q9Y3M8 1113 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 ZHX2Q9Y6X8 837 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 MYOCOSA0A1B0GUC4 107 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 ARHGAP10A1A4S6 786 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 POC1B-GALNT4F8VUJ3 575 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 K7EPI3 171 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 PLSCR1O15162 318 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 TTC4O95801 387 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 ATF2P15336 505 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 ITGB5P18084 799 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 CD58P19256 250 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 CDH3P22223 829 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 ATP1A4Q13733 1029 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 SF3B4Q15427 424 aaKnown RBP eCLIP13.1□□□□□ -0.31
DFFB-202ENST00000339350 MFSD5Q6N075 450 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 CYFIP1Q7L576 1253 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 FAM71AQ8IYT1 594 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 C10orf82Q8WW14 230 aa13.1□□□□□ -0.31
DFFB-202ENST00000339350 SCHIP1Q9P0W5 487 aaPredicted RBP13.1□□□□□ -0.31
DFFB-202ENST00000339350 A6NL46 340 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 PI4K2BG5E9Z4 385 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 CNOT3O75175 753 aaKnown RBP13.09□□□□□ -0.31
DFFB-202ENST00000339350 CFHP08603 1231 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 RALAP11233 206 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 STRN3Q13033 797 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 HNRNPDQ14103 355 aaKnown RBP13.09□□□□□ -0.31
DFFB-202ENST00000339350 CYP1B1Q16678 543 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 UGCGQ16739 394 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 LPCAT4Q643R3 524 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 UGT2A3Q6UWM9 527 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 NLRP9Q7RTR0 991 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 CPXCR1Q8N123 301 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 GLIS1Q8NBF1 620 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 CCDC110Q8TBZ0 833 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 POMGNT1Q8WZA1 660 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 SNF8Q96H20 258 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 PRPF18Q99633 342 aaKnown RBP13.09□□□□□ -0.31
DFFB-202ENST00000339350 TMEM109Q9BVC6 243 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 DNAH12Q6ZR08 3092 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 ZSCAN5DPP0CG00 497 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 PIM1P11309 404 aaPredicted RBP13.09□□□□□ -0.31
DFFB-202ENST00000339350 ESRRAP11474 423 aaPredicted RBP13.09□□□□□ -0.31
DFFB-202ENST00000339350 PCYT1AP49585 367 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 HADHBP55084 474 aaKnown RBP13.09□□□□□ -0.31
DFFB-202ENST00000339350 SPP2Q13103 211 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 NCOA4Q13772 614 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 SNRNP35Q16560 246 aaKnown RBP13.09□□□□□ -0.31
DFFB-202ENST00000339350 NFIL3Q16649 462 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 SPOPLQ6IQ16 392 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 FBXL19Q6PCT2 694 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms