RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 OSTM1Q86WC4 334 aa24.16■■□□□ 1.46
CLPTM1-201ENST00000337392 SEC16BQ96JE7 1060 aa24.16■■□□□ 1.46
CLPTM1-201ENST00000337392 ZNF317Q96PQ6 595 aaPredicted RBP24.16■■□□□ 1.46
CLPTM1-201ENST00000337392 TMEM109Q9BVC6 243 aa24.16■■□□□ 1.46
CLPTM1-201ENST00000337392 CNTN3Q9P232 1028 aa24.16■■□□□ 1.46
CLPTM1-201ENST00000337392 EXOC1LA0A1B0GW35 172 aa24.15■■□□□ 1.46
CLPTM1-201ENST00000337392 HDAC4P56524 1084 aa24.15■■□□□ 1.46
CLPTM1-201ENST00000337392 MFSD5Q6N075 450 aa24.15■■□□□ 1.46
CLPTM1-201ENST00000337392 PYROXD2Q8N2H3 581 aa24.15■■□□□ 1.46
CLPTM1-201ENST00000337392 SNRNP25Q9BV90 132 aaKnown RBP24.15■■□□□ 1.46
CLPTM1-201ENST00000337392 MYO18AQ92614 2054 aaKnown RBP24.15■■□□□ 1.46
CLPTM1-201ENST00000337392 VIMP08670 466 aaKnown RBP24.15■■□□□ 1.46
CLPTM1-201ENST00000337392 BRAFP15056 766 aa24.15■■□□□ 1.46
CLPTM1-201ENST00000337392 PTPN7P35236 360 aa24.15■■□□□ 1.46
CLPTM1-201ENST00000337392 FKBP1BP68106 108 aa24.15■■□□□ 1.46
CLPTM1-201ENST00000337392 CAV1Q03135 178 aa24.15■■□□□ 1.46
CLPTM1-201ENST00000337392 ZKSCAN8Q15776 578 aaPredicted RBP24.15■■□□□ 1.46
CLPTM1-201ENST00000337392 FSCN1Q16658 493 aaKnown RBP24.15■■□□□ 1.46
CLPTM1-201ENST00000337392 PCDH9Q9HC56 1237 aa24.15■■□□□ 1.46
CLPTM1-201ENST00000337392 DRG1Q9Y295 367 aaKnown RBP24.15■■□□□ 1.46
CLPTM1-201ENST00000337392 HGSO14964 777 aaPredicted RBP24.14■■□□□ 1.46
CLPTM1-201ENST00000337392 GNL1P36915 607 aaPredicted RBP24.14■■□□□ 1.46
CLPTM1-201ENST00000337392 GPX6P59796 221 aa24.14■■□□□ 1.46
CLPTM1-201ENST00000337392 LMNB2Q03252 620 aa24.14■■□□□ 1.46
CLPTM1-201ENST00000337392 KRT81Q14533 505 aa24.14■■□□□ 1.46
CLPTM1-201ENST00000337392 DARS2Q6PI48 645 aaKnown RBP24.14■■□□□ 1.46
CLPTM1-201ENST00000337392 FAM228AQ86W67 206 aa24.14■■□□□ 1.46
CLPTM1-201ENST00000337392 C4orf33Q8N1A6 199 aa24.14■■□□□ 1.46
CLPTM1-201ENST00000337392 CHMP6Q96FZ7 201 aa24.14■■□□□ 1.46
CLPTM1-201ENST00000337392 HESX1Q9UBX0 185 aa24.14■■□□□ 1.46
CLPTM1-201ENST00000337392 NDUFV1P49821 464 aa24.14■■□□□ 1.45
CLPTM1-201ENST00000337392 IGDCC3Q8IVU1 814 aa24.14■■□□□ 1.45
CLPTM1-201ENST00000337392 SERPINB12Q96P63 405 aa24.14■■□□□ 1.45
CLPTM1-201ENST00000337392 TRIM56Q9BRZ2 755 aaKnown RBP24.14■■□□□ 1.45
CLPTM1-201ENST00000337392 MAK16Q9BXY0 300 aaKnown RBP24.14■■□□□ 1.45
CLPTM1-201ENST00000337392 C12orf65Q9H3J6 166 aaKnown RBP24.14■■□□□ 1.45
CLPTM1-201ENST00000337392 CNOT10Q9H9A5 744 aaKnown RBP24.14■■□□□ 1.45
CLPTM1-201ENST00000337392 A6NNZ2 444 aa24.14■■□□□ 1.45
CLPTM1-201ENST00000337392 TNPO2O14787 897 aaKnown RBP24.14■■□□□ 1.45
CLPTM1-201ENST00000337392 SLC6A3Q01959 620 aa24.14■■□□□ 1.45
CLPTM1-201ENST00000337392 TAZQ16635 292 aa24.14■■□□□ 1.45
CLPTM1-201ENST00000337392 BBS9Q3SYG4 887 aa24.14■■□□□ 1.45
CLPTM1-201ENST00000337392 TUBB8Q3ZCM7 444 aa24.14■■□□□ 1.45
CLPTM1-201ENST00000337392 PAN2Q504Q3 1202 aaKnown RBP24.14■■□□□ 1.45
CLPTM1-201ENST00000337392 DYDC1Q8WWB3 177 aa24.14■■□□□ 1.45
CLPTM1-201ENST00000337392 PAAF1Q9BRP4 392 aa24.14■■□□□ 1.45
CLPTM1-201ENST00000337392 FARP1Q9Y4F1 1045 aaPredicted RBP24.14■■□□□ 1.45
CLPTM1-201ENST00000337392 CLUHO75153 1309 aa24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 C17orf102A2RUQ5 167 aa24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 H7C0C1 242 aa24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 APOC4-APOC2K7ER74 178 aa24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 PIRO00625 290 aa24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 PTGESO14684 152 aa24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 APOC2P02655 101 aa24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 SDC4P31431 198 aa24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 ATP5OP48047 213 aa24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 GSCP56915 257 aaPredicted RBP24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 PURAQ00577 322 aaKnown RBP24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 KYAT1Q16773 422 aa24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 FAM47CQ5HY64 1035 aa24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 PQLC3Q8N755 202 aa24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 PCDH19Q8TAB3 1148 aa24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 PAIP2Q9BPZ3 127 aaKnown RBP24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 ROPN1BQ9BZX4 212 aaPredicted RBP24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 AP5M1Q9H0R1 490 aa24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 ROPN1Q9HAT0 212 aaPredicted RBP24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 PLEKHA5Q9HAU0 1116 aa24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 CRHR2Q13324 411 aa24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 PKN2Q16513 984 aaKnown RBP24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 HIF1AQ16665 826 aa24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 GNASQ5JWF2 1037 aa24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 MICALL1Q8N3F8 863 aa24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 CCDC185Q8N715 623 aa24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 PLD5Q8N7P1 536 aa24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 ELAC2Q9BQ52 826 aaKnown RBP24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 SLC4A5Q9BY07 1137 aa24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 UBQLN1Q9UMX0 589 aaKnown RBP24.13■■□□□ 1.45
CLPTM1-201ENST00000337392 RASA4BC9J798 803 aa24.12■■□□□ 1.45
CLPTM1-201ENST00000337392 HAS3O00219 553 aa24.12■■□□□ 1.45
CLPTM1-201ENST00000337392 MCF2LO15068 1137 aa24.12■■□□□ 1.45
CLPTM1-201ENST00000337392 RASA4O43374 803 aa24.12■■□□□ 1.45
CLPTM1-201ENST00000337392 CAP1Q01518 475 aa24.12■■□□□ 1.45
CLPTM1-201ENST00000337392 KIAA0319Q5VV43 1072 aa24.12■■□□□ 1.45
CLPTM1-201ENST00000337392 P3H4Q92791 437 aa24.12■■□□□ 1.45
CLPTM1-201ENST00000337392 THOC1Q96FV9 657 aaKnown RBP24.12■■□□□ 1.45
CLPTM1-201ENST00000337392 A0A1W2PPM1 405 aa24.12■■□□□ 1.45
CLPTM1-201ENST00000337392 I3L4J1 428 aa24.12■■□□□ 1.45
CLPTM1-201ENST00000337392 STAU1O95793 577 aaKnown RBP24.12■■□□□ 1.45
CLPTM1-201ENST00000337392 MLH1P40692 756 aa24.12■■□□□ 1.45
CLPTM1-201ENST00000337392 LILRA4P59901 499 aa24.12■■□□□ 1.45
CLPTM1-201ENST00000337392 MORF4L2Q15014 288 aa24.12■■□□□ 1.45
CLPTM1-201ENST00000337392 C17orf99Q6UX52 265 aa24.12■■□□□ 1.45
CLPTM1-201ENST00000337392 TMEM110Q86TL2 294 aa24.12■■□□□ 1.45
CLPTM1-201ENST00000337392 BBOF1Q8ND07 529 aa24.12■■□□□ 1.45
CLPTM1-201ENST00000337392 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.12■■□□□ 1.45
CLPTM1-201ENST00000337392 KLF6Q99612 283 aaPredicted RBP24.12■■□□□ 1.45
CLPTM1-201ENST00000337392 PCDH18Q9HCL0 1135 aa24.12■■□□□ 1.45
CLPTM1-201ENST00000337392 XPO7Q9UIA9 1087 aaKnown RBP24.12■■□□□ 1.45
CLPTM1-201ENST00000337392 CHMP2BQ9UQN3 213 aa24.12■■□□□ 1.45
CLPTM1-201ENST00000337392 ZNF638Q14966 1978 aaKnown RBP24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms