RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 TMEM150AQ86TG1 271 aa18.42■□□□□ 0.54
CHGA-202ENST00000334654 SCUBE3Q8IX30 993 aa18.42■□□□□ 0.54
CHGA-202ENST00000334654 MCOLN2Q8IZK6 566 aa18.42■□□□□ 0.54
CHGA-202ENST00000334654 CLEC4CQ8WTT0 213 aa18.42■□□□□ 0.54
CHGA-202ENST00000334654 NDRG1Q92597 394 aaKnown RBP18.42■□□□□ 0.54
CHGA-202ENST00000334654 ZNF512Q96ME7 567 aaPredicted RBP18.42■□□□□ 0.54
CHGA-202ENST00000334654 ULBP1Q9BZM6 244 aa18.42■□□□□ 0.54
CHGA-202ENST00000334654 DEF6Q9H4E7 631 aa18.42■□□□□ 0.54
CHGA-202ENST00000334654 LRRC4Q9HBW1 653 aa18.42■□□□□ 0.54
CHGA-202ENST00000334654 COMMD8Q9NX08 183 aa18.42■□□□□ 0.54
CHGA-202ENST00000334654 EPN1Q9Y6I3 576 aaPredicted RBP18.42■□□□□ 0.54
CHGA-202ENST00000334654 NCANO14594 1321 aa18.42■□□□□ 0.54
CHGA-202ENST00000334654 USP17L7P0C7H9 530 aa18.41■□□□□ 0.54
CHGA-202ENST00000334654 HOXB8P17481 243 aaPredicted RBP18.41■□□□□ 0.54
CHGA-202ENST00000334654 NSFP46459 744 aaKnown RBP18.41■□□□□ 0.54
CHGA-202ENST00000334654 EPHA5P54756 1037 aa18.41■□□□□ 0.54
CHGA-202ENST00000334654 CCDC122Q5T0U0 273 aa18.41■□□□□ 0.54
CHGA-202ENST00000334654 RARS2Q5T160 578 aaKnown RBP18.41■□□□□ 0.54
CHGA-202ENST00000334654 CYP4A22Q5TCH4 519 aa18.41■□□□□ 0.54
CHGA-202ENST00000334654 ITIH5Q86UX2 942 aa18.41■□□□□ 0.54
CHGA-202ENST00000334654 XYLT1Q86Y38 959 aa18.41■□□□□ 0.54
CHGA-202ENST00000334654 KHSRPQ92945 711 aaKnown RBP eCLIP18.41■□□□□ 0.54
CHGA-202ENST00000334654 C18orf8Q96DM3 657 aa18.41■□□□□ 0.54
CHGA-202ENST00000334654 PIWIL1Q96J94 861 aaKnown RBP18.41■□□□□ 0.54
CHGA-202ENST00000334654 NOX5Q96PH1 765 aa18.41■□□□□ 0.54
CHGA-202ENST00000334654 C11orf70Q9BRQ4 267 aa18.41■□□□□ 0.54
CHGA-202ENST00000334654 KCNF1Q9H3M0 494 aa18.41■□□□□ 0.54
CHGA-202ENST00000334654 CDH22Q9UJ99 828 aa18.41■□□□□ 0.54
CHGA-202ENST00000334654 MAGED2Q9UNF1 606 aaPredicted RBP18.41■□□□□ 0.54
CHGA-202ENST00000334654 SCML2Q9UQR0 700 aa18.41■□□□□ 0.54
CHGA-202ENST00000334654 PRUNE2Q8WUY3 3088 aa18.41■□□□□ 0.54
CHGA-202ENST00000334654 TCRBV5S1A1TA0A578 114 aa18.4■□□□□ 0.54
CHGA-202ENST00000334654 EIF3CLB5ME19 914 aaKnown RBP18.4■□□□□ 0.54
CHGA-202ENST00000334654 TADA3O75528 432 aa18.4■□□□□ 0.54
CHGA-202ENST00000334654 NDUFA10O95299 355 aa18.4■□□□□ 0.54
CHGA-202ENST00000334654 ZBED1O96006 694 aa18.4■□□□□ 0.54
CHGA-202ENST00000334654 F11P03951 625 aa18.4■□□□□ 0.54
CHGA-202ENST00000334654 PTPN2P17706 415 aa18.4■□□□□ 0.54
CHGA-202ENST00000334654 YWHAQP27348 245 aa18.4■□□□□ 0.54
CHGA-202ENST00000334654 CCR2P41597 374 aa18.4■□□□□ 0.54
CHGA-202ENST00000334654 DAOAP59103 153 aa18.4■□□□□ 0.54
CHGA-202ENST00000334654 NTHL1P78549 312 aa18.4■□□□□ 0.54
CHGA-202ENST00000334654 C1QBPQ07021 282 aaKnown RBP18.4■□□□□ 0.54
CHGA-202ENST00000334654 TAF10Q12962 218 aa18.4■□□□□ 0.54
CHGA-202ENST00000334654 GAREM2Q75VX8 874 aa18.4■□□□□ 0.54
CHGA-202ENST00000334654 SCD5Q86SK9 330 aa18.4■□□□□ 0.54
CHGA-202ENST00000334654 GPR149Q86SP6 731 aa18.4■□□□□ 0.54
CHGA-202ENST00000334654 MCRS1Q96EZ8 462 aa18.4■□□□□ 0.54
CHGA-202ENST00000334654 VCPIP1Q96JH7 1222 aa18.4■□□□□ 0.54
CHGA-202ENST00000334654 EIF3CQ99613 913 aaKnown RBP18.4■□□□□ 0.54
CHGA-202ENST00000334654 APOL5Q9BWW9 433 aa18.4■□□□□ 0.54
CHGA-202ENST00000334654 MIS12Q9H081 205 aa18.4■□□□□ 0.54
CHGA-202ENST00000334654 FBXO44Q9H4M3 255 aa18.4■□□□□ 0.54
CHGA-202ENST00000334654 CNGB3Q9NQW8 809 aa18.4■□□□□ 0.54
CHGA-202ENST00000334654 ADAM22Q9P0K1 906 aa18.4■□□□□ 0.54
CHGA-202ENST00000334654 REXO2Q9Y3B8 237 aaKnown RBP18.4■□□□□ 0.54
CHGA-202ENST00000334654 XYLBO75191 536 aa18.39■□□□□ 0.54
CHGA-202ENST00000334654 MOSPD3O75425 235 aa18.39■□□□□ 0.54
CHGA-202ENST00000334654 ZDHHC11BP0C7U3 371 aa18.39■□□□□ 0.54
CHGA-202ENST00000334654 SRGAP2BP0DMP2 458 aa18.39■□□□□ 0.54
CHGA-202ENST00000334654 CYLC1P35663 651 aaPredicted RBP18.39■□□□□ 0.54
CHGA-202ENST00000334654 GSCP56915 257 aaPredicted RBP18.39■□□□□ 0.54
CHGA-202ENST00000334654 MRPS5P82675 430 aaKnown RBP18.39■□□□□ 0.54
CHGA-202ENST00000334654 IFRD2Q12894 506 aaPredicted RBP18.39■□□□□ 0.54
CHGA-202ENST00000334654 ZNF268Q14587 947 aaPredicted RBP18.39■□□□□ 0.54
CHGA-202ENST00000334654 OLFML1Q6UWY5 402 aa18.39■□□□□ 0.54
CHGA-202ENST00000334654 FAM183BPQ6ZVS7 135 aa18.39■□□□□ 0.54
CHGA-202ENST00000334654 GRASPQ7Z6J2 395 aaPredicted RBP18.39■□□□□ 0.54
CHGA-202ENST00000334654 CCDC112Q8NEF3 446 aa18.39■□□□□ 0.54
CHGA-202ENST00000334654 SMG7Q92540 1137 aaKnown RBP18.39■□□□□ 0.54
CHGA-202ENST00000334654 ZNF830Q96NB3 372 aaPredicted RBP18.39■□□□□ 0.54
CHGA-202ENST00000334654 CORO1BQ9BR76 489 aa18.39■□□□□ 0.54
CHGA-202ENST00000334654 PACSIN1Q9BY11 444 aa18.39■□□□□ 0.54
CHGA-202ENST00000334654 CHORDC1Q9UHD1 332 aaPredicted RBP18.39■□□□□ 0.54
CHGA-202ENST00000334654 SPTBN5Q9NRC6 3674 aaKnown RBP18.39■□□□□ 0.53
CHGA-202ENST00000334654 YJEFN3A6XGL0 299 aa18.39■□□□□ 0.53
CHGA-202ENST00000334654 E7ENQ6 273 aa18.39■□□□□ 0.53
CHGA-202ENST00000334654 FBXO21O94952 628 aa18.39■□□□□ 0.53
CHGA-202ENST00000334654 RHOP08100 348 aa18.39■□□□□ 0.53
CHGA-202ENST00000334654 GALCP54803 685 aa18.39■□□□□ 0.53
CHGA-202ENST00000334654 TAF5Q15542 800 aa18.39■□□□□ 0.53
CHGA-202ENST00000334654 PRSS36Q5K4E3 855 aa18.39■□□□□ 0.53
CHGA-202ENST00000334654 PPP1R2P3Q6NXS1 205 aa18.39■□□□□ 0.53
CHGA-202ENST00000334654 HFE2Q6ZVN8 426 aa18.39■□□□□ 0.53
CHGA-202ENST00000334654 SIX6OS1Q8N1H7 587 aa18.39■□□□□ 0.53
CHGA-202ENST00000334654 ELMOD1Q8N336 334 aa18.39■□□□□ 0.53
CHGA-202ENST00000334654 IPO4Q8TEX9 1081 aaKnown RBP18.39■□□□□ 0.53
CHGA-202ENST00000334654 PPM1EQ8WY54 764 aa18.39■□□□□ 0.53
CHGA-202ENST00000334654 FBXO32Q969P5 355 aa18.39■□□□□ 0.53
CHGA-202ENST00000334654 ADAM7Q9H2U9 754 aa18.39■□□□□ 0.53
CHGA-202ENST00000334654 NMUR1Q9HB89 426 aa18.39■□□□□ 0.53
CHGA-202ENST00000334654 AVENQ9NQS1 362 aaPredicted RBP18.39■□□□□ 0.53
CHGA-202ENST00000334654 OSER1Q9NX31 292 aa18.39■□□□□ 0.53
CHGA-202ENST00000334654 GMIPQ9P107 970 aa18.39■□□□□ 0.53
CHGA-202ENST00000334654 SPDYE4A6NLX3 237 aa18.38■□□□□ 0.53
CHGA-202ENST00000334654 ARHGAP6O43182 974 aa18.38■□□□□ 0.53
CHGA-202ENST00000334654 CALB1P05937 261 aa18.38■□□□□ 0.53
CHGA-202ENST00000334654 FYNP06241 537 aa18.38■□□□□ 0.53
CHGA-202ENST00000334654 PTMAP06454 111 aaKnown RBP18.38■□□□□ 0.53
CHGA-202ENST00000334654 RRM1P23921 792 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms