RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 ILDR2Q71H61 639 aa24.4■■□□□ 1.5
NDEL1-201ENST00000334527 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.4■■□□□ 1.5
NDEL1-201ENST00000334527 TMEM237Q96Q45 408 aa24.4■■□□□ 1.5
NDEL1-201ENST00000334527 MYCBPQ99417 103 aaPredicted RBP24.4■■□□□ 1.5
NDEL1-201ENST00000334527 LRMDAQ9H2I8 198 aa24.4■■□□□ 1.5
NDEL1-201ENST00000334527 EBF2Q9HAK2 575 aa24.4■■□□□ 1.5
NDEL1-201ENST00000334527 TSPAN16Q9UKR8 245 aa24.4■■□□□ 1.5
NDEL1-201ENST00000334527 AKT3Q9Y243 479 aa24.4■■□□□ 1.5
NDEL1-201ENST00000334527 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.39■■□□□ 1.5
NDEL1-201ENST00000334527 KBTBD13C9JR72 458 aa24.39■■□□□ 1.5
NDEL1-201ENST00000334527 MT-ND3P03897 115 aa24.39■■□□□ 1.5
NDEL1-201ENST00000334527 ARF4P18085 180 aaPredicted RBP24.39■■□□□ 1.5
NDEL1-201ENST00000334527 KRT81Q14533 505 aa24.39■■□□□ 1.5
NDEL1-201ENST00000334527 KCNJ11Q14654 390 aa24.39■■□□□ 1.5
NDEL1-201ENST00000334527 ZNF484Q5JVG2 852 aa24.39■■□□□ 1.5
NDEL1-201ENST00000334527 RPAINQ86UA6 219 aa24.39■■□□□ 1.5
NDEL1-201ENST00000334527 UTP4Q969X6 686 aaKnown RBP24.39■■□□□ 1.5
NDEL1-201ENST00000334527 IKBKGQ9Y6K9 419 aa24.39■■□□□ 1.5
NDEL1-201ENST00000334527 TCRBV9S1A1TA0A576 114 aa24.39■■□□□ 1.49
NDEL1-201ENST00000334527 CCND1P24385 295 aa24.39■■□□□ 1.49
NDEL1-201ENST00000334527 IREB2P48200 963 aaKnown RBP24.39■■□□□ 1.49
NDEL1-201ENST00000334527 YWHAGP61981 247 aaKnown RBP eCLIP24.39■■□□□ 1.49
NDEL1-201ENST00000334527 ATP11AP98196 1134 aa24.39■■□□□ 1.49
NDEL1-201ENST00000334527 POU5F1BQ06416 359 aa24.39■■□□□ 1.49
NDEL1-201ENST00000334527 INCA1Q0VD86 236 aa24.39■■□□□ 1.49
NDEL1-201ENST00000334527 PTK7Q13308 1070 aa24.39■■□□□ 1.49
NDEL1-201ENST00000334527 ZNF276Q8N554 614 aa24.39■■□□□ 1.49
NDEL1-201ENST00000334527 FAF2Q96CS3 445 aa24.39■■□□□ 1.49
NDEL1-201ENST00000334527 TEX264Q9Y6I9 313 aa24.39■■□□□ 1.49
NDEL1-201ENST00000334527 ANP32DO95626 131 aa24.38■■□□□ 1.49
NDEL1-201ENST00000334527 VTNP04004 478 aa24.38■■□□□ 1.49
NDEL1-201ENST00000334527 LCLAT1Q6UWP7 414 aa24.38■■□□□ 1.49
NDEL1-201ENST00000334527 RNF157Q96PX1 679 aa24.38■■□□□ 1.49
NDEL1-201ENST00000334527 IQANK1A0A1B0GTG1 560 aa24.38■■□□□ 1.49
NDEL1-201ENST00000334527 AVILO75366 819 aa24.38■■□□□ 1.49
NDEL1-201ENST00000334527 ZNF200P98182 395 aaPredicted RBP24.38■■□□□ 1.49
NDEL1-201ENST00000334527 KBTBD12Q3ZCT8 623 aa24.38■■□□□ 1.49
NDEL1-201ENST00000334527 GJC2Q5T442 439 aaPredicted RBP24.38■■□□□ 1.49
NDEL1-201ENST00000334527 CCDC125Q86Z20 511 aa24.38■■□□□ 1.49
NDEL1-201ENST00000334527 SULF1Q8IWU6 871 aa24.38■■□□□ 1.49
NDEL1-201ENST00000334527 C12orf29Q8N999 325 aa24.38■■□□□ 1.49
NDEL1-201ENST00000334527 DPP3Q9NY33 737 aa24.38■■□□□ 1.49
NDEL1-201ENST00000334527 ITGA11Q9UKX5 1188 aa24.38■■□□□ 1.49
NDEL1-201ENST00000334527 ZSWIM8A7E2V4 1837 aa24.37■■□□□ 1.49
NDEL1-201ENST00000334527 LPXNO60711 386 aa24.37■■□□□ 1.49
NDEL1-201ENST00000334527 TROVE2P10155 538 aaKnown RBP eCLIP24.37■■□□□ 1.49
NDEL1-201ENST00000334527 RGS7P49802 495 aa24.37■■□□□ 1.49
NDEL1-201ENST00000334527 RBP5P82980 135 aa24.37■■□□□ 1.49
NDEL1-201ENST00000334527 SCYL2Q6P3W7 929 aa24.37■■□□□ 1.49
NDEL1-201ENST00000334527 ZNF449Q6P9G9 518 aa24.37■■□□□ 1.49
NDEL1-201ENST00000334527 NLRP9Q7RTR0 991 aa24.37■■□□□ 1.49
NDEL1-201ENST00000334527 ERO1BQ86YB8 467 aa24.37■■□□□ 1.49
NDEL1-201ENST00000334527 DCPSQ96C86 337 aaKnown RBP24.37■■□□□ 1.49
NDEL1-201ENST00000334527 MIS12Q9H081 205 aa24.37■■□□□ 1.49
NDEL1-201ENST00000334527 VPS11Q9H270 941 aa24.37■■□□□ 1.49
NDEL1-201ENST00000334527 ALG13Q9NP73 1137 aaKnown RBP24.37■■□□□ 1.49
NDEL1-201ENST00000334527 RAB6BQ9NRW1 208 aa24.37■■□□□ 1.49
NDEL1-201ENST00000334527 CHADO15335 359 aa24.37■■□□□ 1.49
NDEL1-201ENST00000334527 PFKMP08237 780 aa24.37■■□□□ 1.49
NDEL1-201ENST00000334527 PARP6Q2NL67 630 aa24.37■■□□□ 1.49
NDEL1-201ENST00000334527 GOLGA7BQ2TAP0 167 aa24.37■■□□□ 1.49
NDEL1-201ENST00000334527 CCDC14Q49A88 953 aa24.37■■□□□ 1.49
NDEL1-201ENST00000334527 IFNLR1Q8IU57 520 aaPredicted RBP24.37■■□□□ 1.49
NDEL1-201ENST00000334527 MAP7D3Q8IWC1 876 aa24.37■■□□□ 1.49
NDEL1-201ENST00000334527 AGGF1Q8N302 714 aaeCLIP24.37■■□□□ 1.49
NDEL1-201ENST00000334527 SLC44A1Q8WWI5 657 aa24.37■■□□□ 1.49
NDEL1-201ENST00000334527 N4BP2L2Q92802 583 aaPredicted RBP24.37■■□□□ 1.49
NDEL1-201ENST00000334527 SERAC1Q96JX3 654 aa24.37■■□□□ 1.49
NDEL1-201ENST00000334527 NT5C1AQ9BXI3 368 aa24.37■■□□□ 1.49
NDEL1-201ENST00000334527 MANSC1Q9H8J5 431 aa24.37■■□□□ 1.49
NDEL1-201ENST00000334527 USP29Q9HBJ7 922 aa24.37■■□□□ 1.49
NDEL1-201ENST00000334527 GPATCH2LQ9NWQ4 482 aa24.37■■□□□ 1.49
NDEL1-201ENST00000334527 NOP53Q9NZM5 478 aaKnown RBP24.37■■□□□ 1.49
NDEL1-201ENST00000334527 C2CD2LO14523 706 aa24.36■■□□□ 1.49
NDEL1-201ENST00000334527 CXCL11O14625 94 aa24.36■■□□□ 1.49
NDEL1-201ENST00000334527 KCNN4O15554 427 aa24.36■■□□□ 1.49
NDEL1-201ENST00000334527 LGALS2P05162 132 aa24.36■■□□□ 1.49
NDEL1-201ENST00000334527 INHBAP08476 426 aa24.36■■□□□ 1.49
NDEL1-201ENST00000334527 T-ENOLP0DO92 83 aa24.36■■□□□ 1.49
NDEL1-201ENST00000334527 ELF1P32519 619 aa24.36■■□□□ 1.49
NDEL1-201ENST00000334527 FAAP100Q0VG06 881 aa24.36■■□□□ 1.49
NDEL1-201ENST00000334527 OVGP1Q12889 678 aa24.36■■□□□ 1.49
NDEL1-201ENST00000334527 TAF1BQ53T94 588 aaPredicted RBP24.36■■□□□ 1.49
NDEL1-201ENST00000334527 PLD5Q8N7P1 536 aa24.36■■□□□ 1.49
NDEL1-201ENST00000334527 GBA2Q9HCG7 927 aaPredicted RBP24.36■■□□□ 1.49
NDEL1-201ENST00000334527 PAK5Q9P286 719 aa24.36■■□□□ 1.49
NDEL1-201ENST00000334527 KIAA1257Q9ULG3 409 aa24.36■■□□□ 1.49
NDEL1-201ENST00000334527 HEY1Q9Y5J3 304 aa24.36■■□□□ 1.49
NDEL1-201ENST00000334527 RPSAP08865 295 aaKnown RBP24.36■■□□□ 1.49
NDEL1-201ENST00000334527 ARHGAP1Q07960 439 aa24.36■■□□□ 1.49
NDEL1-201ENST00000334527 PLEKHG4Q58EX7 1191 aa24.36■■□□□ 1.49
NDEL1-201ENST00000334527 SLC45A4Q5BKX6 768 aa24.36■■□□□ 1.49
NDEL1-201ENST00000334527 TLDC1Q6P9B6 456 aa24.36■■□□□ 1.49
NDEL1-201ENST00000334527 INPP5DQ92835 1189 aa24.36■■□□□ 1.49
NDEL1-201ENST00000334527 NGRNQ9NPE2 291 aaKnown RBP24.36■■□□□ 1.49
NDEL1-201ENST00000334527 ZFP69BQ9UJL9 534 aa24.36■■□□□ 1.49
NDEL1-201ENST00000334527 DCTN4Q9UJW0 460 aa24.36■■□□□ 1.49
NDEL1-201ENST00000334527 CBX6O95503 412 aa24.35■■□□□ 1.49
NDEL1-201ENST00000334527 GCLCP48506 637 aaPredicted RBP24.35■■□□□ 1.49
NDEL1-201ENST00000334527 KYAT1Q16773 422 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms