RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 ZNF143P52747 638 aaPredicted RBP24.39■■□□□ 1.5
TSEN54-201ENST00000333213 GPR17Q13304 367 aa24.39■■□□□ 1.5
TSEN54-201ENST00000333213 ZNF211Q13398 564 aaPredicted RBP24.39■■□□□ 1.5
TSEN54-201ENST00000333213 RASIP1Q5U651 963 aa24.39■■□□□ 1.5
TSEN54-201ENST00000333213 TXNRD3NBQ6F5E7 133 aa24.39■■□□□ 1.5
TSEN54-201ENST00000333213 BHLHA9Q7RTU4 235 aa24.39■■□□□ 1.5
TSEN54-201ENST00000333213 FBXO22Q8NEZ5 403 aa24.39■■□□□ 1.5
TSEN54-201ENST00000333213 CLP1Q92989 425 aaKnown RBP24.39■■□□□ 1.5
TSEN54-201ENST00000333213 FUBP3Q96I24 572 aaKnown RBP eCLIP24.39■■□□□ 1.5
TSEN54-201ENST00000333213 CFAP57Q96MR6 1250 aa24.39■■□□□ 1.5
TSEN54-201ENST00000333213 PARD6BQ9BYG5 372 aa24.39■■□□□ 1.5
TSEN54-201ENST00000333213 ADAM33Q9BZ11 813 aa24.39■■□□□ 1.5
TSEN54-201ENST00000333213 CHD9Q3L8U1 2897 aa24.39■■□□□ 1.5
TSEN54-201ENST00000333213 H7C4K7 107 aa24.39■■□□□ 1.49
TSEN54-201ENST00000333213 CES2O00748 559 aa24.39■■□□□ 1.49
TSEN54-201ENST00000333213 LRCH4O75427 683 aa24.39■■□□□ 1.49
TSEN54-201ENST00000333213 PDGFRAP16234 1089 aa24.39■■□□□ 1.49
TSEN54-201ENST00000333213 ATP2A2P16615 1042 aaKnown RBP24.39■■□□□ 1.49
TSEN54-201ENST00000333213 GPD1P21695 349 aa24.39■■□□□ 1.49
TSEN54-201ENST00000333213 SCNN1AP37088 669 aa24.39■■□□□ 1.49
TSEN54-201ENST00000333213 GRIK1P39086 918 aa24.39■■□□□ 1.49
TSEN54-201ENST00000333213 GPR15P49685 360 aa24.39■■□□□ 1.49
TSEN54-201ENST00000333213 C15orf59Q2T9L4 293 aaPredicted RBP24.39■■□□□ 1.49
TSEN54-201ENST00000333213 CCDC14Q49A88 953 aa24.39■■□□□ 1.49
TSEN54-201ENST00000333213 SLC8B1Q6J4K2 584 aa24.39■■□□□ 1.49
TSEN54-201ENST00000333213 HFE2Q6ZVN8 426 aa24.39■■□□□ 1.49
TSEN54-201ENST00000333213 FIBCD1Q8N539 461 aa24.39■■□□□ 1.49
TSEN54-201ENST00000333213 SP7Q8TDD2 431 aaPredicted RBP24.39■■□□□ 1.49
TSEN54-201ENST00000333213 PBKQ96KB5 322 aa24.39■■□□□ 1.49
TSEN54-201ENST00000333213 SLC9A7Q96T83 725 aa24.39■■□□□ 1.49
TSEN54-201ENST00000333213 RAD9AQ99638 391 aa24.39■■□□□ 1.49
TSEN54-201ENST00000333213 LBHD1Q9BQE6 289 aaPredicted RBP24.39■■□□□ 1.49
TSEN54-201ENST00000333213 MTMR11A4FU01 709 aa24.38■■□□□ 1.49
TSEN54-201ENST00000333213 TNFRSF10BO14763 440 aa24.38■■□□□ 1.49
TSEN54-201ENST00000333213 CPB1P15086 417 aa24.38■■□□□ 1.49
TSEN54-201ENST00000333213 TFE3P19532 575 aaPredicted RBP24.38■■□□□ 1.49
TSEN54-201ENST00000333213 PSMD5Q16401 504 aa24.38■■□□□ 1.49
TSEN54-201ENST00000333213 DDX53Q86TM3 631 aaKnown RBP24.38■■□□□ 1.49
TSEN54-201ENST00000333213 SIX6OS1Q8N1H7 587 aa24.38■■□□□ 1.49
TSEN54-201ENST00000333213 STKLD1Q8NE28 680 aa24.38■■□□□ 1.49
TSEN54-201ENST00000333213 SCAMP5Q8TAC9 235 aa24.38■■□□□ 1.49
TSEN54-201ENST00000333213 PHOSPHO2Q8TCD6 241 aa24.38■■□□□ 1.49
TSEN54-201ENST00000333213 CLSTN3Q9BQT9 956 aa24.38■■□□□ 1.49
TSEN54-201ENST00000333213 CARD9Q9H257 536 aa24.38■■□□□ 1.49
TSEN54-201ENST00000333213 PNPLA8Q9NP80 782 aa24.38■■□□□ 1.49
TSEN54-201ENST00000333213 PCDHB5Q9Y5E4 795 aa24.38■■□□□ 1.49
TSEN54-201ENST00000333213 WDR27A2RRH5 827 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 USP17L7P0C7H9 530 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 PYGMP11217 842 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 DAOAP59103 153 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 DSG1Q02413 1049 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 ATP13A4Q4VNC1 1196 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 C9orf50Q5SZB4 431 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 ARCQ7LC44 396 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 RASGEF1CQ8N431 466 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 UBL4BQ8N7F7 174 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 CNGB3Q9NQW8 809 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 RAB21Q9UL25 225 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 BACE2Q9Y5Z0 518 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 USP3Q9Y6I4 520 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 CCDC85CA6NKD9 419 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 YJEFN3A6XGL0 299 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 E7ENQ6 273 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 CEP104O60308 925 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 FYNP06241 537 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 ROR1Q01973 937 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 DDR2Q16832 855 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 SDHAF4Q5VUM1 108 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 KIAA1841Q6NSI8 718 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 CNPY3Q9BT09 278 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 C11orf84Q9BUA3 381 aaPredicted RBP24.37■■□□□ 1.49
TSEN54-201ENST00000333213 HERC2P3Q9BVR0 1158 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 LCMT1Q9UIC8 334 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 SLC27A5Q9Y2P5 690 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 PATJQ8NI35 1801 aa24.37■■□□□ 1.49
TSEN54-201ENST00000333213 SOAT2O75908 522 aa24.36■■□□□ 1.49
TSEN54-201ENST00000333213 IL1R2P27930 398 aa24.36■■□□□ 1.49
TSEN54-201ENST00000333213 SLC25A11Q02978 314 aaKnown RBP24.36■■□□□ 1.49
TSEN54-201ENST00000333213 EFHC1Q5JVL4 640 aa24.36■■□□□ 1.49
TSEN54-201ENST00000333213 SCN4BQ8IWT1 228 aa24.36■■□□□ 1.49
TSEN54-201ENST00000333213 RHOT1Q8IXI2 618 aa24.36■■□□□ 1.49
TSEN54-201ENST00000333213 AUTS2Q8WXX7 1259 aa24.36■■□□□ 1.49
TSEN54-201ENST00000333213 OXCT2Q9BYC2 517 aaPredicted RBP24.36■■□□□ 1.49
TSEN54-201ENST00000333213 DPYSL4O14531 572 aa24.35■■□□□ 1.49
TSEN54-201ENST00000333213 TLL1O43897 1013 aa24.35■■□□□ 1.49
TSEN54-201ENST00000333213 FGF18O76093 207 aa24.35■■□□□ 1.49
TSEN54-201ENST00000333213 OR1D2P34982 312 aa24.35■■□□□ 1.49
TSEN54-201ENST00000333213 GLUD2P49448 558 aa24.35■■□□□ 1.49
TSEN54-201ENST00000333213 SLC5A3P53794 718 aa24.35■■□□□ 1.49
TSEN54-201ENST00000333213 ATP11AP98196 1134 aa24.35■■□□□ 1.49
TSEN54-201ENST00000333213 PM20D1Q6GTS8 502 aa24.35■■□□□ 1.49
TSEN54-201ENST00000333213 VSTM1Q6UX27 236 aa24.35■■□□□ 1.49
TSEN54-201ENST00000333213 ZNF572Q7Z3I7 529 aaPredicted RBP24.35■■□□□ 1.49
TSEN54-201ENST00000333213 VPS52Q8N1B4 723 aa24.35■■□□□ 1.49
TSEN54-201ENST00000333213 ACTRT1Q8TDG2 376 aa24.35■■□□□ 1.49
TSEN54-201ENST00000333213 FAM149B1Q96BN6 582 aa24.35■■□□□ 1.49
TSEN54-201ENST00000333213 RNPC3Q96LT9 517 aaKnown RBP24.35■■□□□ 1.49
TSEN54-201ENST00000333213 FUT8Q9BYC5 575 aa24.35■■□□□ 1.49
TSEN54-201ENST00000333213 CALCOCO1Q9P1Z2 691 aa24.35■■□□□ 1.49
TSEN54-201ENST00000333213 PCDHB12Q9Y5F1 795 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms