RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 SLC6A3Q01959 620 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 POU5F1BQ06416 359 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 PCSK7Q16549 785 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 RPAINQ86UA6 219 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 KATNAL2Q8IYT4 538 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 ZNF516Q92618 1163 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 HDAC11Q96DB2 347 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 ERVK-5Q9HDB9 667 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 E2F8A0AVK6 867 aa9.9□□□□□ -0.83
SS18L1-201ENST00000331758 PECAM1P16284 738 aaPredicted RBP9.9□□□□□ -0.83
SS18L1-201ENST00000331758 PAMP19021 973 aa9.9□□□□□ -0.83
SS18L1-201ENST00000331758 NCF2P19878 526 aaPredicted RBP9.9□□□□□ -0.83
SS18L1-201ENST00000331758 MMP8P22894 467 aa9.9□□□□□ -0.83
SS18L1-201ENST00000331758 CYP2F1P24903 491 aa9.9□□□□□ -0.83
SS18L1-201ENST00000331758 PCK1P35558 622 aa9.9□□□□□ -0.83
SS18L1-201ENST00000331758 PRAMEP78395 509 aa9.9□□□□□ -0.83
SS18L1-201ENST00000331758 ZNF235Q14590 738 aa9.9□□□□□ -0.83
SS18L1-201ENST00000331758 PTPN20Q4JDL3 420 aa9.9□□□□□ -0.83
SS18L1-201ENST00000331758 C10orf120Q5SQS8 335 aa9.9□□□□□ -0.83
SS18L1-201ENST00000331758 DENND5BQ6ZUT9 1274 aa9.9□□□□□ -0.83
SS18L1-201ENST00000331758 RASSF3Q86WH2 238 aa9.9□□□□□ -0.83
SS18L1-201ENST00000331758 MYLK4Q86YV6 388 aaPredicted RBP9.9□□□□□ -0.83
SS18L1-201ENST00000331758 LRRC57Q8N9N7 239 aa9.9□□□□□ -0.83
SS18L1-201ENST00000331758 ARRDC4Q8NCT1 418 aa9.9□□□□□ -0.83
SS18L1-201ENST00000331758 PGLYRP2Q96PD5 576 aa9.9□□□□□ -0.83
SS18L1-201ENST00000331758 FGFR1OP2Q9NVK5 253 aa9.9□□□□□ -0.83
SS18L1-201ENST00000331758 ST3GAL5Q9UNP4 418 aa9.9□□□□□ -0.83
SS18L1-201ENST00000331758 COQ4Q9Y3A0 265 aa9.9□□□□□ -0.83
SS18L1-201ENST00000331758 TIAM2Q8IVF5 1701 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 CHUKO15111 745 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 MSCO60682 206 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 AMPD1P23109 780 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 GRM5P41594 1212 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 SNCBQ16143 134 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 SLC39A4Q6P5W5 647 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 WDR75Q8IWA0 830 aaKnown RBP9.89□□□□□ -0.83
SS18L1-201ENST00000331758 TMEM192Q8IY95 271 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 IPMKQ8NFU5 416 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 JOSD2Q8TAC2 188 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 ZBED3Q96IU2 234 aaPredicted RBP9.89□□□□□ -0.83
SS18L1-201ENST00000331758 GCNAQ96QF7 691 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 APOL2Q9BQE5 337 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 NOCTQ9UK39 431 aaKnown RBP9.89□□□□□ -0.83
SS18L1-201ENST00000331758 ZBTB48P10074 688 aaPredicted RBP9.89□□□□□ -0.83
SS18L1-201ENST00000331758 DARSP14868 501 aaKnown RBP9.89□□□□□ -0.83
SS18L1-201ENST00000331758 ETS1P14921 441 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 CHRNB2P17787 502 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 XPAP23025 273 aaPredicted RBP9.89□□□□□ -0.83
SS18L1-201ENST00000331758 YWHAHQ04917 246 aaPredicted RBP9.89□□□□□ -0.83
SS18L1-201ENST00000331758 ACTN3Q08043 901 aaPredicted RBP9.89□□□□□ -0.83
SS18L1-201ENST00000331758 ZNF844Q08AG5 666 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 NBPF20Q3BBV1 942 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 RNF135Q8IUD6 432 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 SERPINB12Q96P63 405 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 PDZD7Q9H5P4 517 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 TUBGCP4Q9UGJ1 667 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 ABCA3Q99758 1704 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 TCRBV7S2A1N4TA0A589 114 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 HSPA4LO95757 839 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 ESRRAP11474 423 aaPredicted RBP9.89□□□□□ -0.83
SS18L1-201ENST00000331758 ELNP15502 786 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 KDELR1P24390 212 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 AARSP49588 968 aaKnown RBP eCLIP9.89□□□□□ -0.835e-7■■■■■ 27.5
SS18L1-201ENST00000331758 MBTD1Q05BQ5 628 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 MORF4L2Q15014 288 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 SNX17Q15036 470 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 CTXN3Q4LDR2 81 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 ERMARDQ5T6L9 678 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 MROH9Q5TGP6 573 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 KDM7AQ6ZMT4 941 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 FAM183BPQ6ZVS7 135 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 DEFB128Q7Z7B8 93 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 CHSY1Q86X52 802 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 CCNYL1Q8N7R7 359 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 ZNF669Q96BR6 464 aaPredicted RBP9.89□□□□□ -0.83
SS18L1-201ENST00000331758 ZFP42Q96MM3 310 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 FAM129AQ9BZQ8 928 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 MINDY3Q9H8M7 445 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 PCDH9Q9HC56 1237 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 NUDT5Q9UKK9 219 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 CNTNAP2Q9UHC6 1331 aa9.89□□□□□ -0.83
SS18L1-201ENST00000331758 RIPK2O43353 540 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 C22orf31O95567 290 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 PRKAR2AP13861 404 aaKnown RBP9.88□□□□□ -0.83
SS18L1-201ENST00000331758 BDNFP23560 247 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 CD52P31358 61 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 ALDH7A1P49419 539 aaKnown RBP9.88□□□□□ -0.83
SS18L1-201ENST00000331758 PPP1R26Q5T8A7 1209 aaPredicted RBP9.88□□□□□ -0.83
SS18L1-201ENST00000331758 PIGZQ86VD9 579 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 AGR3Q8TD06 166 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 RMDN1Q96DB5 314 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 SLITRK1Q96PX8 696 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 LRRC37BQ96QE4 947 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 CPXM1Q96SM3 734 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 ULBP1Q9BZM6 244 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 MAF1Q9H063 256 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 TRPC7Q9HCX4 862 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 PCMTD2Q9NV79 361 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 FAM53CQ9NYF3 392 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 SMG5Q9UPR3 1016 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms