RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 CYP2F1P24903 491 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 SLC1A1P43005 524 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 MAP3K7CLP57077 242 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 TMC7Q7Z402 723 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 ERICH1Q86X53 443 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 ATAD1Q8NBU5 361 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 ZMIZ2Q8NF64 920 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 POF1BQ8WVV4 589 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 SAMD11Q96NU1 681 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 LRRC1Q9BTT6 524 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 MTMR11A4FU01 709 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 TMEM110-MUSTN1A8MSY1 372 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 RRP9O43818 475 aaKnown RBP19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 CA8P35219 290 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 CTNNA1P35221 906 aaKnown RBP19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 CYP4A22Q5TCH4 519 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 PPP2R2DQ66LE6 453 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 C8orf74Q6P047 294 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 LLGL2Q6P1M3 1020 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 PHLDB2Q86SQ0 1253 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 TTC9BQ8N6N2 239 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 KCNK16Q96T55 309 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 TCF25Q9BQ70 676 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 ST7Q9NRC1 585 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 PARVAQ9NVD7 372 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 LCMT1Q9UIC8 334 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 PCDHB5Q9Y5E4 795 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 PCDHA3Q9Y5H8 950 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 MYO1FO00160 1098 aa19.71■□□□□ 0.75
EXOSC3-201ENST00000327304 PIK3R2O00459 728 aa19.71■□□□□ 0.75
EXOSC3-201ENST00000327304 XPO1O14980 1071 aaKnown RBP19.71■□□□□ 0.75
EXOSC3-201ENST00000327304 SPOPO43791 374 aa19.71■□□□□ 0.75
EXOSC3-201ENST00000327304 GABBR2O75899 941 aa19.71■□□□□ 0.75
EXOSC3-201ENST00000327304 CXCL14O95715 111 aa19.71■□□□□ 0.75
EXOSC3-201ENST00000327304 ERBB2P04626 1255 aa19.71■□□□□ 0.75
EXOSC3-201ENST00000327304 PLA2G4AP47712 749 aa19.71■□□□□ 0.75
EXOSC3-201ENST00000327304 PEX5P50542 639 aa19.71■□□□□ 0.75
EXOSC3-201ENST00000327304 UBE3AQ05086 875 aa19.71■□□□□ 0.75
EXOSC3-201ENST00000327304 MAMLD1Q13495 774 aa19.71■□□□□ 0.75
EXOSC3-201ENST00000327304 DCAF12L1Q5VU92 463 aa19.71■□□□□ 0.75
EXOSC3-201ENST00000327304 GPR65Q8IYL9 337 aa19.71■□□□□ 0.75
EXOSC3-201ENST00000327304 CRISPLD1Q9H336 500 aa19.71■□□□□ 0.75
EXOSC3-201ENST00000327304 RXFP1Q9HBX9 757 aa19.71■□□□□ 0.75
EXOSC3-201ENST00000327304 ENTPD7Q9NQZ7 604 aa19.71■□□□□ 0.75
EXOSC3-201ENST00000327304 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.7■□□□□ 0.74
EXOSC3-201ENST00000327304 TEX28O15482 410 aa19.7■□□□□ 0.74
EXOSC3-201ENST00000327304 RNASE9P60153 205 aaKnown RBP19.7■□□□□ 0.74
EXOSC3-201ENST00000327304 MLLT1Q03111 559 aaPredicted RBP19.7■□□□□ 0.74
EXOSC3-201ENST00000327304 CAMK1Q14012 370 aa19.7■□□□□ 0.74
EXOSC3-201ENST00000327304 PLPP4Q5VZY2 271 aa19.7■□□□□ 0.74
EXOSC3-201ENST00000327304 PIGZQ86VD9 579 aa19.7■□□□□ 0.74
EXOSC3-201ENST00000327304 STK32AQ8WU08 396 aa19.7■□□□□ 0.74
EXOSC3-201ENST00000327304 ALG3Q92685 438 aa19.7■□□□□ 0.74
EXOSC3-201ENST00000327304 FUBP3Q96I24 572 aaKnown RBP eCLIP19.7■□□□□ 0.74
EXOSC3-201ENST00000327304 BTBD6Q96KE9 485 aa19.7■□□□□ 0.74
EXOSC3-201ENST00000327304 SLC4A5Q9BY07 1137 aa19.7■□□□□ 0.74
EXOSC3-201ENST00000327304 CSNK1G1Q9HCP0 422 aa19.7■□□□□ 0.74
EXOSC3-201ENST00000327304 TLR9Q9NR96 1032 aa19.7■□□□□ 0.74
EXOSC3-201ENST00000327304 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.7■□□□□ 0.74
EXOSC3-201ENST00000327304 FNIP2Q9P278 1114 aa19.7■□□□□ 0.74
EXOSC3-201ENST00000327304 E5RJQ4 531 aa19.69■□□□□ 0.74
EXOSC3-201ENST00000327304 CNPP09543 421 aaKnown RBP19.69■□□□□ 0.74
EXOSC3-201ENST00000327304 SLC8A3P57103 927 aa19.69■□□□□ 0.74
EXOSC3-201ENST00000327304 GPM6BQ13491 265 aa19.69■□□□□ 0.74
EXOSC3-201ENST00000327304 SYNCQ9H7C4 482 aa19.69■□□□□ 0.74
EXOSC3-201ENST00000327304 DMAP1Q9NPF5 467 aaPredicted RBP19.69■□□□□ 0.74
EXOSC3-201ENST00000327304 STRIP2Q9ULQ0 834 aa19.69■□□□□ 0.74
EXOSC3-201ENST00000327304 SSX2IPQ9Y2D8 614 aa19.69■□□□□ 0.74
EXOSC3-201ENST00000327304 HIDE1A8MVS5 230 aa19.69■□□□□ 0.74
EXOSC3-201ENST00000327304 HHLA1C9JL84 531 aa19.69■□□□□ 0.74
EXOSC3-201ENST00000327304 F8VP50 259 aa19.69■□□□□ 0.74
EXOSC3-201ENST00000327304 H3BNC9 293 aa19.69■□□□□ 0.74
EXOSC3-201ENST00000327304 PROSCO94903 275 aa19.69■□□□□ 0.74
EXOSC3-201ENST00000327304 CREMQ03060 361 aa19.69■□□□□ 0.74
EXOSC3-201ENST00000327304 ADCY1Q08828 1119 aa19.69■□□□□ 0.74
EXOSC3-201ENST00000327304 RAB33AQ14088 237 aa19.69■□□□□ 0.74
EXOSC3-201ENST00000327304 LONRF2Q1L5Z9 754 aa19.69■□□□□ 0.74
EXOSC3-201ENST00000327304 MAP9Q49MG5 647 aa19.69■□□□□ 0.74
EXOSC3-201ENST00000327304 BEND6Q5SZJ8 279 aaPredicted RBP19.69■□□□□ 0.74
EXOSC3-201ENST00000327304 GPRIN1Q7Z2K8 1008 aa19.69■□□□□ 0.74
EXOSC3-201ENST00000327304 FEZF2Q8TBJ5 459 aa19.69■□□□□ 0.74
EXOSC3-201ENST00000327304 ARNTL2Q8WYA1 636 aa19.69■□□□□ 0.74
EXOSC3-201ENST00000327304 KRT35Q92764 455 aa19.69■□□□□ 0.74
EXOSC3-201ENST00000327304 SLC28A3Q9HAS3 691 aa19.69■□□□□ 0.74
EXOSC3-201ENST00000327304 STIM2Q9P246 746 aa19.69■□□□□ 0.74
EXOSC3-201ENST00000327304 SLC27A5Q9Y2P5 690 aa19.69■□□□□ 0.74
EXOSC3-201ENST00000327304 TCRBV5S1A1TA0A578 114 aa19.68■□□□□ 0.74
EXOSC3-201ENST00000327304 KRIT1O00522 736 aa19.68■□□□□ 0.74
EXOSC3-201ENST00000327304 FSCN2O14926 492 aa19.68■□□□□ 0.74
EXOSC3-201ENST00000327304 SOAT2O75908 522 aa19.68■□□□□ 0.74
EXOSC3-201ENST00000327304 ABLIM3O94929 683 aa19.68■□□□□ 0.74
EXOSC3-201ENST00000327304 MAN1A1P33908 653 aa19.68■□□□□ 0.74
EXOSC3-201ENST00000327304 IRS1P35568 1242 aa19.68■□□□□ 0.74
EXOSC3-201ENST00000327304 GRIK1P39086 918 aa19.68■□□□□ 0.74
EXOSC3-201ENST00000327304 MAGEA11P43364 429 aa19.68■□□□□ 0.74
EXOSC3-201ENST00000327304 GABRB2P47870 512 aa19.68■□□□□ 0.74
EXOSC3-201ENST00000327304 RPL34P49207 117 aaKnown RBP19.68■□□□□ 0.74
EXOSC3-201ENST00000327304 GPR15P49685 360 aa19.68■□□□□ 0.74
EXOSC3-201ENST00000327304 NDUFV1P49821 464 aa19.68■□□□□ 0.74
EXOSC3-201ENST00000327304 SMARCB1Q12824 385 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms