RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 CENPUQ71F23 418 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 ANKS4BQ8N8V4 417 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 USP33Q8TEY7 942 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 KCNK16Q96T55 309 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 UGT1A7Q9HAW7 530 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 UGT1A10Q9HAW8 530 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 UGT1A8Q9HAW9 530 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 ETNK2Q9NVF9 386 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 KCNH4Q9UQ05 1017 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 NME7Q9Y5B8 376 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 RLFQ13129 1914 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 A6NJR5 290 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 DNALI1O14645 258 aaPredicted RBP11.12□□□□□ -0.63
CUL4A-201ENST00000326335 LGR5O75473 907 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 BEST1O76090 585 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 FGFR1P11362 822 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 DRD4P21917 467 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 ROR1Q01973 937 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 TRIM32Q13049 653 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 WSCD1Q658N2 575 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 DENND5BQ6ZUT9 1274 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 USP50Q70EL3 339 aaPredicted RBP11.12□□□□□ -0.63
CUL4A-201ENST00000326335 AGR3Q8TD06 166 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 PITPNM3Q9BZ71 974 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 TXLNGYQ9BZA5 131 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 ASNSD1Q9NWL6 643 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 STRIP2Q9ULQ0 834 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 ABT1Q9ULW3 272 aaKnown RBP11.12□□□□□ -0.63
CUL4A-201ENST00000326335 SIGLEC16A6NMB1 481 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 AGTP01019 485 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 KRT7P08729 469 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 ZNF132P52740 706 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 SURF1Q15526 300 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 CYP1B1Q16678 543 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 ZNF484Q5JVG2 852 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 ERMARDQ5T6L9 678 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 VSTM1Q6UX27 236 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 ARRDC4Q8NCT1 418 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 PPTC7Q8NI37 304 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 MS4A4AQ96JQ5 239 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 SMC6Q96SB8 1091 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 SNRNP25Q9BV90 132 aaKnown RBP11.12□□□□□ -0.63
CUL4A-201ENST00000326335 AP5M1Q9H0R1 490 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.12□□□□□ -0.637e-6■□□□□ 10.1
CUL4A-201ENST00000326335 NOD1Q9Y239 953 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.12□□□□□ -0.63
CUL4A-201ENST00000326335 A0A087WUV0 522 aaPredicted RBP11.11□□□□□ -0.63
CUL4A-201ENST00000326335 IGKV6-21A0A0C4DH24 114 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 A0A0G2JND7 137 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 PMM2O15305 246 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 PAPSS1O43252 624 aaPredicted RBP11.11□□□□□ -0.63
CUL4A-201ENST00000326335 HOXA11P31270 313 aaPredicted RBP11.11□□□□□ -0.63
CUL4A-201ENST00000326335 SOWAHAQ2M3V2 549 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 ZNF792Q3KQV3 632 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 PDIK1LQ8N165 341 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 ALLCQ8N6M5 410 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 CCDC185Q8N715 623 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 CPT1BQ92523 772 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 USP6NLQ92738 828 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 TLCD1Q96CP7 247 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 L3MBTL3Q96JM7 780 aaPredicted RBP11.11□□□□□ -0.63
CUL4A-201ENST00000326335 SLC5A4Q9NY91 659 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 KBTBD13C9JR72 458 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 IGF2BP3O00425 579 aaKnown RBP eCLIP11.11□□□□□ -0.63
CUL4A-201ENST00000326335 MAGEB2O15479 319 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 UBOX5O94941 541 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 IL18RAPO95256 599 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 MOCS2O96007 188 aaPredicted RBP11.11□□□□□ -0.63
CUL4A-201ENST00000326335 NUDT17P0C025 328 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 SRGAP2BP0DMP2 458 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 GHRP10912 638 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 GOT1P17174 413 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 ADRA1DP25100 572 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 SLC25A11Q02978 314 aaKnown RBP11.11□□□□□ -0.63
CUL4A-201ENST00000326335 MROH9Q5TGP6 573 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 SDHAF4Q5VUM1 108 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 TRMT10CQ7L0Y3 403 aaKnown RBP11.11□□□□□ -0.63
CUL4A-201ENST00000326335 ZNF354CQ86Y25 554 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 TMEM237Q96Q45 408 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 NPHS2Q9NP85 383 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 HUS1O60921 280 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 TRUB2O95900 331 aaKnown RBP11.11□□□□□ -0.63
CUL4A-201ENST00000326335 MSH2P43246 934 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 RNASELQ05823 741 aaKnown RBP11.11□□□□□ -0.63
CUL4A-201ENST00000326335 MFSD10Q14728 455 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 CLUL1Q15846 466 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 MAMDC4Q6UXC1 1216 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 GPR152Q8TDT2 470 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 ATXN2LQ8WWM7 1075 aaKnown RBP11.11□□□□□ -0.63
CUL4A-201ENST00000326335 PRCCQ92733 491 aaPredicted RBP11.11□□□□□ -0.63
CUL4A-201ENST00000326335 ABHD16BQ9H3Z7 469 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 ZNF395Q9H8N7 513 aaPredicted RBP11.11□□□□□ -0.63
CUL4A-201ENST00000326335 CEP290O15078 2479 aa11.11□□□□□ -0.63
CUL4A-201ENST00000326335 SMIM28A0A1B0GU29 152 aa11.1□□□□□ -0.63
CUL4A-201ENST00000326335 CDH16O75309 829 aa11.1□□□□□ -0.63
CUL4A-201ENST00000326335 MCF2P10911 925 aa11.1□□□□□ -0.63
CUL4A-201ENST00000326335 MMP13P45452 471 aa11.1□□□□□ -0.63
CUL4A-201ENST00000326335 SLC1A5Q15758 541 aa11.1□□□□□ -0.63
CUL4A-201ENST00000326335 KBTBD12Q3ZCT8 623 aa11.1□□□□□ -0.63
CUL4A-201ENST00000326335 CCDC14Q49A88 953 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms