RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 CCDC14Q49A88 953 aa23.33■■□□□ 1.32
PNKP-201ENST00000322344 PKDCCQ504Y2 493 aa23.33■■□□□ 1.32
PNKP-201ENST00000322344 ZDHHC17Q8IUH5 632 aa23.33■■□□□ 1.32
PNKP-201ENST00000322344 CYTH2Q99418 400 aa23.33■■□□□ 1.32
PNKP-201ENST00000322344 SLC4A5Q9BY07 1137 aa23.33■■□□□ 1.32
PNKP-201ENST00000322344 PHTF1Q9UMS5 762 aa23.33■■□□□ 1.32
PNKP-201ENST00000322344 H7C0C1 242 aa23.32■■□□□ 1.32
PNKP-201ENST00000322344 HOXD8P13378 290 aaPredicted RBP23.32■■□□□ 1.32
PNKP-201ENST00000322344 SKIV2L2P42285 1042 aaKnown RBP23.32■■□□□ 1.32
PNKP-201ENST00000322344 ATP5OP48047 213 aa23.32■■□□□ 1.32
PNKP-201ENST00000322344 SLC6A3Q01959 620 aa23.32■■□□□ 1.32
PNKP-201ENST00000322344 SH3PXD2AQ5TCZ1 1133 aa23.32■■□□□ 1.32
PNKP-201ENST00000322344 OLFML1Q6UWY5 402 aa23.32■■□□□ 1.32
PNKP-201ENST00000322344 FAM47EQ6ZV65 393 aa23.32■■□□□ 1.32
PNKP-201ENST00000322344 SESTD1Q86VW0 696 aa23.32■■□□□ 1.32
PNKP-201ENST00000322344 FITM2Q8N6M3 262 aa23.32■■□□□ 1.32
PNKP-201ENST00000322344 RTP4Q96DX8 246 aa23.32■■□□□ 1.32
PNKP-201ENST00000322344 MRRFQ96E11 262 aaKnown RBP23.32■■□□□ 1.32
PNKP-201ENST00000322344 SLC45A1Q9Y2W3 748 aa23.32■■□□□ 1.32
PNKP-201ENST00000322344 ZNF487B1APH4 448 aa23.32■■□□□ 1.32
PNKP-201ENST00000322344 KRT4P19013 534 aa23.32■■□□□ 1.32
PNKP-201ENST00000322344 SDC4P31431 198 aa23.32■■□□□ 1.32
PNKP-201ENST00000322344 CDC42EP1Q00587 391 aa23.32■■□□□ 1.32
PNKP-201ENST00000322344 DNAJC3Q13217 504 aa23.32■■□□□ 1.32
PNKP-201ENST00000322344 RIPK1Q13546 671 aa23.32■■□□□ 1.32
PNKP-201ENST00000322344 KCNJ11Q14654 390 aa23.32■■□□□ 1.32
PNKP-201ENST00000322344 MARCH8Q5T0T0 291 aa23.32■■□□□ 1.32
PNKP-201ENST00000322344 NPNTQ6UXI9 565 aa23.32■■□□□ 1.32
PNKP-201ENST00000322344 TMEM110Q86TL2 294 aa23.32■■□□□ 1.32
PNKP-201ENST00000322344 LRRC52Q8N7C0 313 aa23.32■■□□□ 1.32
PNKP-201ENST00000322344 STK32AQ8WU08 396 aa23.32■■□□□ 1.32
PNKP-201ENST00000322344 HESX1Q9UBX0 185 aa23.32■■□□□ 1.32
PNKP-201ENST00000322344 GGT7Q9UJ14 662 aa23.32■■□□□ 1.32
PNKP-201ENST00000322344 TM9SF1O15321 606 aa23.31■■□□□ 1.32
PNKP-201ENST00000322344 EDF1O60869 148 aaKnown RBP23.31■■□□□ 1.32
PNKP-201ENST00000322344 NQO1P15559 274 aaKnown RBP23.31■■□□□ 1.32
PNKP-201ENST00000322344 SLC1A5Q15758 541 aa23.31■■□□□ 1.32
PNKP-201ENST00000322344 CDO1Q16878 200 aa23.31■■□□□ 1.32
PNKP-201ENST00000322344 PPP1R26Q5T8A7 1209 aaPredicted RBP23.31■■□□□ 1.32
PNKP-201ENST00000322344 ZC3H18Q86VM9 953 aaKnown RBP23.31■■□□□ 1.32
PNKP-201ENST00000322344 UNC93AQ86WB7 457 aa23.31■■□□□ 1.32
PNKP-201ENST00000322344 ECHDC2Q86YB7 292 aa23.31■■□□□ 1.32
PNKP-201ENST00000322344 MZB1Q8WU39 189 aa23.31■■□□□ 1.32
PNKP-201ENST00000322344 DCAKDQ8WVC6 231 aa23.31■■□□□ 1.32
PNKP-201ENST00000322344 SLC10A4Q96EP9 437 aa23.31■■□□□ 1.32
PNKP-201ENST00000322344 PIWIL1Q96J94 861 aaKnown RBP23.31■■□□□ 1.32
PNKP-201ENST00000322344 L3MBTL3Q96JM7 780 aaPredicted RBP23.31■■□□□ 1.32
PNKP-201ENST00000322344 RMDN2Q96LZ7 410 aa23.31■■□□□ 1.32
PNKP-201ENST00000322344 USH1CQ9Y6N9 552 aa23.31■■□□□ 1.32
PNKP-201ENST00000322344 APOL1O14791 398 aa23.3■■□□□ 1.32
PNKP-201ENST00000322344 NPTXRO95502 500 aa23.3■■□□□ 1.32
PNKP-201ENST00000322344 EFTUD2Q15029 972 aaKnown RBP eCLIP23.3■■□□□ 1.327e-7■■■■■ 37.5
PNKP-201ENST00000322344 TBC1D1Q86TI0 1168 aaPredicted RBP23.3■■□□□ 1.32
PNKP-201ENST00000322344 PLD5Q8N7P1 536 aa23.3■■□□□ 1.32
PNKP-201ENST00000322344 C12orf29Q8N999 325 aa23.3■■□□□ 1.32
PNKP-201ENST00000322344 BEST2Q8NFU1 509 aa23.3■■□□□ 1.32
PNKP-201ENST00000322344 FAM172AQ8WUF8 416 aa23.3■■□□□ 1.32
PNKP-201ENST00000322344 RRN3P2A6NIE6 340 aa23.3■■□□□ 1.32
PNKP-201ENST00000322344 PIK3R2O00459 728 aa23.3■■□□□ 1.32
PNKP-201ENST00000322344 MDM4O15151 490 aa23.3■■□□□ 1.32
PNKP-201ENST00000322344 EPHX2P34913 555 aa23.3■■□□□ 1.32
PNKP-201ENST00000322344 RGS7P49802 495 aa23.3■■□□□ 1.32
PNKP-201ENST00000322344 SETDB1Q15047 1291 aa23.3■■□□□ 1.32
PNKP-201ENST00000322344 SEPT7Q16181 437 aaKnown RBP23.3■■□□□ 1.32
PNKP-201ENST00000322344 SLC9A4Q6AI14 798 aa23.3■■□□□ 1.32
PNKP-201ENST00000322344 PMF1Q6P1K2 205 aa23.3■■□□□ 1.32
PNKP-201ENST00000322344 LVRNQ6Q4G3 990 aa23.3■■□□□ 1.32
PNKP-201ENST00000322344 C4orf22Q6V702 233 aa23.3■■□□□ 1.32
PNKP-201ENST00000322344 TTC30AQ86WT1 665 aa23.3■■□□□ 1.32
PNKP-201ENST00000322344 TAB3Q8N5C8 712 aaPredicted RBP23.3■■□□□ 1.32
PNKP-201ENST00000322344 SLC35F5Q8WV83 523 aa23.3■■□□□ 1.32
PNKP-201ENST00000322344 FAF2Q96CS3 445 aa23.3■■□□□ 1.32
PNKP-201ENST00000322344 SNX27Q96L92 541 aa23.3■■□□□ 1.32
PNKP-201ENST00000322344 MRPL45Q9BRJ2 306 aaKnown RBP23.3■■□□□ 1.32
PNKP-201ENST00000322344 ZNF670Q9BS34 389 aa23.3■■□□□ 1.32
PNKP-201ENST00000322344 USP29Q9HBJ7 922 aa23.3■■□□□ 1.32
PNKP-201ENST00000322344 GRID1Q9ULK0 1009 aa23.3■■□□□ 1.32
PNKP-201ENST00000322344 CHMP2BQ9UQN3 213 aa23.3■■□□□ 1.32
PNKP-201ENST00000322344 SNX9Q9Y5X1 595 aa23.3■■□□□ 1.32
PNKP-201ENST00000322344 IQANK1A0A1B0GTG1 560 aa23.29■■□□□ 1.32
PNKP-201ENST00000322344 BCLAF3A2AJT9 711 aaKnown RBP23.29■■□□□ 1.32
PNKP-201ENST00000322344 GRAP2O75791 330 aa23.29■■□□□ 1.32
PNKP-201ENST00000322344 SNAI1O95863 264 aaPredicted RBP23.29■■□□□ 1.32
PNKP-201ENST00000322344 MMP3P08254 477 aa23.29■■□□□ 1.32
PNKP-201ENST00000322344 SLC8A1P32418 973 aa23.29■■□□□ 1.32
PNKP-201ENST00000322344 ELK3P41970 407 aa23.29■■□□□ 1.32
PNKP-201ENST00000322344 YARSP54577 528 aaKnown RBP23.29■■□□□ 1.32
PNKP-201ENST00000322344 BCAR1P56945 870 aa23.29■■□□□ 1.32
PNKP-201ENST00000322344 MGAT5Q09328 741 aa23.29■■□□□ 1.32
PNKP-201ENST00000322344 PCBP1Q15365 356 aaKnown RBP eCLIP23.29■■□□□ 1.32
PNKP-201ENST00000322344 DUSP28Q4G0W2 176 aa23.29■■□□□ 1.32
PNKP-201ENST00000322344 ARHGAP17Q68EM7 881 aa23.29■■□□□ 1.32
PNKP-201ENST00000322344 SCYL2Q6P3W7 929 aa23.29■■□□□ 1.32
PNKP-201ENST00000322344 SLC27A1Q6PCB7 646 aa23.29■■□□□ 1.32
PNKP-201ENST00000322344 C1orf228Q6PIY5 440 aa23.29■■□□□ 1.32
PNKP-201ENST00000322344 GCOM2Q9BZD3 368 aaPredicted RBP23.29■■□□□ 1.32
PNKP-201ENST00000322344 PCDH18Q9HCL0 1135 aa23.29■■□□□ 1.32
PNKP-201ENST00000322344 NGRNQ9NPE2 291 aaKnown RBP23.29■■□□□ 1.32
PNKP-201ENST00000322344 TEX264Q9Y6I9 313 aa23.29■■□□□ 1.32
PNKP-201ENST00000322344 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms