RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 VEGFBP49765 207 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 NRLP54845 237 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 KRT81Q14533 505 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 FASTKD3Q14CZ7 662 aaKnown RBP7.92□□□□□ -1.14
IFT88-201ENST00000319980 NBPF20Q3BBV1 942 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 ZC3H12AQ5D1E8 599 aaKnown RBP7.92□□□□□ -1.14
IFT88-201ENST00000319980 XKR4Q5GH76 650 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 ARHGAP17Q68EM7 881 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 MFSD5Q6N075 450 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 UNC45BQ8IWX7 931 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 CRYBG2Q8N1P7 616 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 FAM71DQ8N9W8 422 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 ANKRD52Q8NB46 1076 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.92□□□□□ -1.14
IFT88-201ENST00000319980 P3H4Q92791 437 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 ARHGEF2Q92974 986 aaKnown RBP7.92□□□□□ -1.14
IFT88-201ENST00000319980 SERPINB12Q96P63 405 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 GDAP2Q9NXN4 497 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 CDY2AQ9Y6F7 541 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.92□□□□□ -1.14
IFT88-201ENST00000319980 PTGESO14684 152 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 MCF2LO15068 1137 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 FAM107AO95990 144 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 IGHA2P01877 340 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 RARBP10826 455 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 TFE3P19532 575 aaPredicted RBP7.91□□□□□ -1.14
IFT88-201ENST00000319980 IBSPP21815 317 aaPredicted RBP7.91□□□□□ -1.14
IFT88-201ENST00000319980 HOXC8P31273 242 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 CTCFP49711 727 aaPredicted RBP7.91□□□□□ -1.14
IFT88-201ENST00000319980 SNX16P57768 344 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 BST2Q10589 180 aaKnown RBP7.91□□□□□ -1.14
IFT88-201ENST00000319980 MTM1Q13496 603 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 DPYSL3Q14195 570 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 MORF4L2Q15014 288 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 CCDC142Q17RM4 750 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 DEFB115Q30KQ5 88 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 SV2CQ496J9 727 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 BOLA3Q53S33 107 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 RNASEH2BQ5TBB1 312 aaKnown RBP7.91□□□□□ -1.14
IFT88-201ENST00000319980 CAPN12Q6ZSI9 719 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 TAOK1Q7L7X3 1001 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 SRLQ86TD4 932 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 EXOC3L1Q86VI1 746 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 MAP7D3Q8IWC1 876 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 ADGRF2Q8IZF7 708 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 ZNF473Q8WTR7 871 aaKnown RBP7.91□□□□□ -1.14
IFT88-201ENST00000319980 STK32AQ8WU08 396 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 CFHR5Q9BXR6 569 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 ST3GAL5Q9UNP4 418 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 RRP15Q9Y3B9 282 aaKnown RBP7.91□□□□□ -1.14
IFT88-201ENST00000319980 CITO14578 2027 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 ZSWIM8A7E2V4 1837 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 ATP2C2O75185 946 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 MAP3K6O95382 1288 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 CREB1P16220 341 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 ACAT1P24752 427 aaKnown RBP7.91□□□□□ -1.14
IFT88-201ENST00000319980 RPL22P35268 128 aaKnown RBP7.91□□□□□ -1.14
IFT88-201ENST00000319980 AFF1P51825 1210 aaKnown RBP7.91□□□□□ -1.14
IFT88-201ENST00000319980 BCAT1P54687 386 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 TNFAIP8L3Q5GJ75 292 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 PPP6R3Q5H9R7 873 aaPredicted RBP7.91□□□□□ -1.14
IFT88-201ENST00000319980 C1orf228Q6PIY5 440 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 RELL1Q8IUW5 271 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 ZBED8Q8IZ13 594 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 TRIB2Q92519 343 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 WNT8BQ93098 351 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 TNIP3Q96KP6 325 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 MTG1Q9BT17 334 aaPredicted RBP7.91□□□□□ -1.14
IFT88-201ENST00000319980 FRMD8P1Q9BZ68 369 aaPredicted RBP7.91□□□□□ -1.14
IFT88-201ENST00000319980 FOXP3Q9BZS1 431 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 INTS9Q9NV88 658 aaKnown RBP7.91□□□□□ -1.14
IFT88-201ENST00000319980 GTF2IRD1Q9UHL9 959 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 GABRQQ9UN88 632 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 HEY1Q9Y5J3 304 aa7.91□□□□□ -1.14
IFT88-201ENST00000319980 CYB561D2O14569 222 aa7.9□□□□□ -1.14
IFT88-201ENST00000319980 ENDOD1O94919 500 aa7.9□□□□□ -1.14
IFT88-201ENST00000319980 DESP17661 470 aa7.9□□□□□ -1.14
IFT88-201ENST00000319980 IL4RP24394 825 aa7.9□□□□□ -1.14
IFT88-201ENST00000319980 MLH1P40692 756 aa7.9□□□□□ -1.14
IFT88-201ENST00000319980 FLT3LGP49771 235 aa7.9□□□□□ -1.14
IFT88-201ENST00000319980 ATXN1P54253 815 aaKnown RBP7.9□□□□□ -1.14
IFT88-201ENST00000319980 HDAC4P56524 1084 aa7.9□□□□□ -1.14
IFT88-201ENST00000319980 MRPS6P82932 125 aaKnown RBP7.9□□□□□ -1.14
IFT88-201ENST00000319980 GAD2Q05329 585 aa7.9□□□□□ -1.14
IFT88-201ENST00000319980 PDIA2Q13087 525 aaKnown RBP7.9□□□□□ -1.14
IFT88-201ENST00000319980 CA9Q16790 459 aa7.9□□□□□ -1.14
IFT88-201ENST00000319980 GDF6Q6KF10 455 aaPredicted RBP7.9□□□□□ -1.14
IFT88-201ENST00000319980 DARS2Q6PI48 645 aaKnown RBP7.9□□□□□ -1.14
IFT88-201ENST00000319980 CEP128Q6ZU80 1094 aa7.9□□□□□ -1.14
IFT88-201ENST00000319980 ZDHHC17Q8IUH5 632 aa7.9□□□□□ -1.14
IFT88-201ENST00000319980 PRCCQ92733 491 aaPredicted RBP7.9□□□□□ -1.14
IFT88-201ENST00000319980 RNF157Q96PX1 679 aa7.9□□□□□ -1.14
IFT88-201ENST00000319980 XPO6Q96QU8 1125 aaKnown RBP7.9□□□□□ -1.14
IFT88-201ENST00000319980 GAD1Q99259 594 aa7.9□□□□□ -1.14
IFT88-201ENST00000319980 CCDC77Q9BR77 488 aa7.9□□□□□ -1.14
IFT88-201ENST00000319980 SNRNP25Q9BV90 132 aaKnown RBP7.9□□□□□ -1.14
IFT88-201ENST00000319980 ABT1Q9ULW3 272 aaKnown RBP7.9□□□□□ -1.14
IFT88-201ENST00000319980 FAM155AB1AL88 458 aaPredicted RBP7.9□□□□□ -1.14
IFT88-201ENST00000319980 CLDN5O00501 218 aa7.9□□□□□ -1.14
IFT88-201ENST00000319980 BANF1O75531 89 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms