RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 KLF6Q99612 283 aaPredicted RBP9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 ELAC2Q9BQ52 826 aaKnown RBP9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 LBHD1Q9BQE6 289 aaPredicted RBP9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 SEMA4AQ9H3S1 761 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 DONSONQ9NYP3 566 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 ZC3H7BQ9UGR2 993 aaKnown RBP9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 BRWD3Q6RI45 1802 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 UNCXA6NJT0 531 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 SIGLEC16A6NMB1 481 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 H3BQF6 201 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 ZSCAN5DPP0CG00 497 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 ILDR2Q71H61 639 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 TRMT10CQ7L0Y3 403 aaKnown RBP9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 CHSY1Q86X52 802 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 SLC13A1Q9BZW2 595 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 PAK5Q9P286 719 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 TLK1Q9UKI8 766 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 MYH4Q9Y623 1939 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 MYH8P13535 1937 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 MAST2Q6P0Q8 1798 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 MX2P20592 715 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 LIG3P49916 1009 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 EFEMP1Q12805 493 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 PDK1Q15118 436 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 KLHL38Q2WGJ6 581 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 C6orf163Q5TEZ5 329 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 ITPRIPL1Q6GPH6 555 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 UNC93AQ86WB7 457 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 C4orf33Q8N1A6 199 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 ATPAF2Q8N5M1 289 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 PRELID2Q8N945 189 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 CCDC197Q8NCU1 140 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 ARHGAP39Q9C0H5 1083 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 RNF39Q9H2S5 420 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 ALG13Q9NP73 1137 aaKnown RBP9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 ZNF446Q9NWS9 450 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 PTPRJQ12913 1337 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 ARAP2Q8WZ64 1704 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 CFAP69A5D8W1 941 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 COPEO14579 308 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 AMPD1P23109 780 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 SLC39A12Q504Y0 691 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 LRRC52Q8N7C0 313 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 RAPGEF5Q92565 580 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 VPS11Q9H270 941 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 PABPC3Q9H361 631 aaKnown RBP9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 CDHR5Q9HBB8 845 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 TMEM39AQ9NV64 488 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 IPO11Q9UI26 975 aaKnown RBP9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 DSEQ9UL01 958 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 GABRQQ9UN88 632 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 DDX60LQ5H9U9 1706 aaKnown RBP9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 TTC36A6NLP5 189 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 NT5C1B-RDH14C9J2C7 533 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 SH3BP5O60239 455 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 CILPO75339 1184 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 KRT38O76015 456 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 PIGRP01833 764 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 CFHP08603 1231 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 CYP2F1P24903 491 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 MNAT1P51948 309 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 PCBP1Q15365 356 aaKnown RBP eCLIP9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 ZNF280DQ6N043 979 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 DCLK2Q8N568 766 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 MCUQ8NE86 351 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 PPP4R1Q8TF05 950 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 LRRN4Q8WUT4 740 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 BORCS6Q96GS4 357 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 MTIF3Q9H2K0 278 aaKnown RBP9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 UBN1Q9NPG3 1134 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 SCN9AQ15858 1988 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 SUN1O94901 812 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 RAG1P15918 1043 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 STIP1P31948 543 aaKnown RBP9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 RAD23BP54727 409 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 STAT4Q14765 748 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 PDK2Q15119 407 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 PCSK7Q16549 785 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 NFE2Q16621 373 aaPredicted RBP9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 EPS8L3Q8TE67 593 aaKnown RBP9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 C16orf70Q9BSU1 422 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 PIDD1Q9HB75 910 aa9.67□□□□□ -0.86
TMEM39A-201ENST00000319172 DOCK2Q92608 1830 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 O00370 1275 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 CES2O00748 559 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 CDH16O75309 829 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 VCPP55072 806 aaKnown RBP9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 ELMSAN1Q6PJG2 1045 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 DENND5BQ6ZUT9 1274 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 PPIL6Q8IXY8 311 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 LRRC57Q8N9N7 239 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 OR6P1Q8NGX9 317 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 CCT6BQ92526 530 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 SMARCD1Q96GM5 515 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 MS4A4AQ96JQ5 239 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 PTPN18Q99952 460 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 CDC42EP4Q9H3Q1 356 aaKnown RBP9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 KANSL3Q9P2N6 904 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 HMGXB4Q9UGU5 601 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 ERBB2P04626 1255 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms