RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 PIP4K2CQ8TBX8 421 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 GRIN3AQ8TCU5 1115 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 SYTL5Q8TDW5 730 aaPredicted RBP10.03□□□□□ -0.8
RPGR-201ENST00000318842 CLEC4DQ8WXI8 215 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 PEBP4Q96S96 227 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 PHACTR1Q9C0D0 580 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 RNPEPQ9H4A4 650 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 A0A0B4J269 797 aa10.02□□□□□ -0.8
RPGR-201ENST00000318842 SPDYE2BA6NHP3 402 aa10.02□□□□□ -0.8
RPGR-201ENST00000318842 H7C0C1 242 aa10.02□□□□□ -0.8
RPGR-201ENST00000318842 NEMP1O14524 444 aa10.02□□□□□ -0.8
RPGR-201ENST00000318842 AMHP03971 560 aa10.02□□□□□ -0.8
RPGR-201ENST00000318842 SPDYE6P0CI01 402 aa10.02□□□□□ -0.8
RPGR-201ENST00000318842 TFE3P19532 575 aaPredicted RBP10.02□□□□□ -0.8
RPGR-201ENST00000318842 ATP5OP48047 213 aa10.02□□□□□ -0.8
RPGR-201ENST00000318842 RGS7P49802 495 aa10.02□□□□□ -0.8
RPGR-201ENST00000318842 TRIP10Q15642 601 aa10.02□□□□□ -0.8
RPGR-201ENST00000318842 CLUL1Q15846 466 aa10.02□□□□□ -0.8
RPGR-201ENST00000318842 SPDYE2Q495Y8 402 aa10.02□□□□□ -0.8
RPGR-201ENST00000318842 PLEKHA7Q6IQ23 1121 aa10.02□□□□□ -0.8
RPGR-201ENST00000318842 IYDQ6PHW0 289 aa10.02□□□□□ -0.8
RPGR-201ENST00000318842 THNSL1Q8IYQ7 743 aa10.02□□□□□ -0.8
RPGR-201ENST00000318842 TNS4Q8IZW8 715 aa10.02□□□□□ -0.8
RPGR-201ENST00000318842 NDUFAF2Q8N183 169 aa10.02□□□□□ -0.8
RPGR-201ENST00000318842 ZNF513Q8N8E2 541 aaPredicted RBP10.02□□□□□ -0.8
RPGR-201ENST00000318842 PNPLA1Q8N8W4 532 aa10.02□□□□□ -0.8
RPGR-201ENST00000318842 NAT8LQ8N9F0 302 aa10.02□□□□□ -0.8
RPGR-201ENST00000318842 ATP11CQ8NB49 1132 aa10.02□□□□□ -0.8
RPGR-201ENST00000318842 KCTD6Q8NC69 237 aa10.02□□□□□ -0.8
RPGR-201ENST00000318842 AZIN2Q96A70 460 aa10.02□□□□□ -0.8
RPGR-201ENST00000318842 CDCA7Q9BWT1 371 aaPredicted RBP10.02□□□□□ -0.8
RPGR-201ENST00000318842 NDE1Q9NXR1 346 aa10.02□□□□□ -0.8
RPGR-201ENST00000318842 AGO2Q9UKV8 859 aaKnown RBP10.02□□□□□ -0.8
RPGR-201ENST00000318842 HES2Q9Y543 173 aa10.02□□□□□ -0.8
RPGR-201ENST00000318842 C3orf70A6NLC5 250 aaPredicted RBP10.02□□□□□ -0.81
RPGR-201ENST00000318842 STX16-NPEPL1H3BU86 382 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 PSTPIP1O43586 416 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 C4BPAP04003 597 aaKnown RBP10.02□□□□□ -0.81
RPGR-201ENST00000318842 RFX1P22670 979 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 SOX11P35716 441 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 USP46P62068 366 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 CAV1Q03135 178 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 BAATQ14032 418 aaPredicted RBP10.02□□□□□ -0.81
RPGR-201ENST00000318842 SLC27A3Q5K4L6 730 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 PPM1LQ5SGD2 360 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 ADGRD1Q6QNK2 874 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 SP8Q8IXZ3 490 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 GALNT4Q8N4A0 578 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 FAF2Q96CS3 445 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 MFSD14AQ96MC6 490 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 TWNKQ96RR1 684 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 CPXM1Q96SM3 734 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 MSTO1Q9BUK6 570 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 ACSS3Q9H6R3 686 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 TLE6Q9H808 572 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 STX18Q9P2W9 335 aaKnown RBP10.02□□□□□ -0.81
RPGR-201ENST00000318842 FARP1Q9Y4F1 1045 aaPredicted RBP10.02□□□□□ -0.81
RPGR-201ENST00000318842 E9PBE3 544 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 LIN7AO14910 233 aaPredicted RBP10.02□□□□□ -0.81
RPGR-201ENST00000318842 KLHL41O60662 606 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 TRPA1O75762 1119 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 ATP5HO75947 161 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 ZWINTO95229 277 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 MMP10P09238 476 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 SRGAP2CP0DJJ0 459 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 ZNF200P98182 395 aaPredicted RBP10.02□□□□□ -0.81
RPGR-201ENST00000318842 DSG1Q02413 1049 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 ASPHQ12797 758 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 PPP2R5DQ14738 602 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 MORF4L2Q15014 288 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 PDK1Q15118 436 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 ZACNQ401N2 412 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.02□□□□□ -0.81
RPGR-201ENST00000318842 TRIM50Q86XT4 487 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 MORC4Q8TE76 937 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 USP13Q92995 863 aaPredicted RBP10.02□□□□□ -0.81
RPGR-201ENST00000318842 ABTB1Q969K4 478 aaPredicted RBP10.02□□□□□ -0.81
RPGR-201ENST00000318842 RANBP17Q9H2T7 1088 aaKnown RBP10.02□□□□□ -0.81
RPGR-201ENST00000318842 PARVAQ9NVD7 372 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 COQ4Q9Y3A0 265 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 MRPL11Q9Y3B7 192 aaKnown RBP10.02□□□□□ -0.81
RPGR-201ENST00000318842 ATP8B3O60423 1300 aa10.02□□□□□ -0.81
RPGR-201ENST00000318842 RBBP6Q7Z6E9 1792 aaKnown RBP10.01□□□□□ -0.81
RPGR-201ENST00000318842 HMX2A2RU54 273 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 MAGEA13PA6NCF6 341 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 GOLGA8TH3BQL2 631 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 KCNN4O15554 427 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 HCRTO43612 131 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 MMP8P22894 467 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 SP2Q02086 613 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 PRKCEQ02156 737 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 PRKG1Q13976 671 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 TTLL12Q14166 644 aaPredicted RBP10.01□□□□□ -0.81
RPGR-201ENST00000318842 PGM5Q15124 567 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 DPY19L2Q6NUT2 758 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 CASC4Q6P4E1 433 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 DLK2Q6UY11 383 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 NUDCD3Q8IVD9 361 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 MFN1Q8IWA4 741 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 LRRC71Q8N4P6 559 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms