RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 KIF9Q9HAQ2 790 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 ITGA11Q9UKX5 1188 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 C2CD2Q9Y426 696 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 COL1A2P08123 1366 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 PASKQ96RG2 1323 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 PLXNA1Q9UIW2 1896 aa7.96□□□□□ -1.13
TRIM55-202ENST00000315962 ENO4A6NNW6 628 aa7.96□□□□□ -1.13
TRIM55-202ENST00000315962 CES2O00748 559 aa7.96□□□□□ -1.13
TRIM55-202ENST00000315962 PTGESO14684 152 aa7.96□□□□□ -1.13
TRIM55-202ENST00000315962 DUSP11O75319 330 aaKnown RBP7.96□□□□□ -1.13
TRIM55-202ENST00000315962 ECEL1O95672 775 aa7.96□□□□□ -1.13
TRIM55-202ENST00000315962 PFKMP08237 780 aa7.96□□□□□ -1.13
TRIM55-202ENST00000315962 CYBAP13498 195 aa7.96□□□□□ -1.13
TRIM55-202ENST00000315962 CTNNA2P26232 953 aa7.96□□□□□ -1.13
TRIM55-202ENST00000315962 NDUFV1P49821 464 aa7.96□□□□□ -1.13
TRIM55-202ENST00000315962 POU5F1BQ06416 359 aa7.96□□□□□ -1.13
TRIM55-202ENST00000315962 CNGA2Q16280 664 aa7.96□□□□□ -1.13
TRIM55-202ENST00000315962 NPNTQ6UXI9 565 aa7.96□□□□□ -1.13
TRIM55-202ENST00000315962 TRIM72Q6ZMU5 477 aa7.96□□□□□ -1.13
TRIM55-202ENST00000315962 FAM183BPQ6ZVS7 135 aa7.96□□□□□ -1.13
TRIM55-202ENST00000315962 IFNLR1Q8IU57 520 aaPredicted RBP7.96□□□□□ -1.13
TRIM55-202ENST00000315962 C3orf58Q8NDZ4 430 aa7.96□□□□□ -1.13
TRIM55-202ENST00000315962 ADAM32Q8TC27 787 aa7.96□□□□□ -1.13
TRIM55-202ENST00000315962 SOCS4Q8WXH5 440 aa7.96□□□□□ -1.13
TRIM55-202ENST00000315962 ZNF570Q96NI8 536 aa7.96□□□□□ -1.13
TRIM55-202ENST00000315962 KCNK16Q96T55 309 aa7.96□□□□□ -1.13
TRIM55-202ENST00000315962 AVENQ9NQS1 362 aaPredicted RBP7.96□□□□□ -1.13
TRIM55-202ENST00000315962 IP6K2Q9UHH9 426 aa7.96□□□□□ -1.13
TRIM55-202ENST00000315962 SCINQ9Y6U3 715 aa7.96□□□□□ -1.13
TRIM55-202ENST00000315962 M0QZ92 97 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 HAS3O00219 553 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 KIF3CO14782 793 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 MGEA5O60502 916 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 BANF1O75531 89 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 CALB1P05937 261 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 PAEPP09466 180 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 P4HA1P13674 534 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 MIPP30301 263 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 LILRA4P59901 499 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 ZC3H12AQ5D1E8 599 aaKnown RBP7.96□□□□□ -1.14
TRIM55-202ENST00000315962 ZNF449Q6P9G9 518 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 FITM2Q8N6M3 262 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 KCTD6Q8NC69 237 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 C3orf20Q8ND61 904 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 BEST2Q8NFU1 509 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 FAM149B1Q96BN6 582 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 TRIM11Q96F44 468 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 CAPNS2Q96L46 248 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 PLCD4Q9BRC7 762 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 SCN1AP35498 2009 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 PDE4DIPQ5VU43 2346 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 TCRBV5S1A1TA0A578 114 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 MED7O43513 233 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 SNX3O60493 162 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 CST8O60676 142 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 TKTP29401 623 aaKnown RBP7.96□□□□□ -1.14
TRIM55-202ENST00000315962 CHRNA3P32297 505 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 CCNHP51946 323 aaPredicted RBP7.96□□□□□ -1.14
TRIM55-202ENST00000315962 CRYBB1P53674 252 aaPredicted RBP7.96□□□□□ -1.14
TRIM55-202ENST00000315962 INHBEP58166 350 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 PITX1P78337 314 aaPredicted RBP7.96□□□□□ -1.14
TRIM55-202ENST00000315962 SP3Q02447 781 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 GAD2Q05329 585 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 ZBTB6Q15916 424 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 GSTCDQ8NEC7 633 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 KBTBD7Q8WVZ9 684 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 RXFP2Q8WXD0 754 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 KCNN1Q92952 543 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 SPDL1Q96EA4 605 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 FAXDC2Q96IV6 333 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 PEBP4Q96S96 227 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 C12orf65Q9H3J6 166 aaKnown RBP7.96□□□□□ -1.14
TRIM55-202ENST00000315962 KDM4CQ9H3R0 1056 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 SPC25Q9HBM1 224 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.96□□□□□ -1.14
TRIM55-202ENST00000315962 GTF2IRD1Q9UHL9 959 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 ZMYND8Q9ULU4 1186 aaPredicted RBP7.96□□□□□ -1.14
TRIM55-202ENST00000315962 PADI3Q9ULW8 664 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 SLC12A4Q9UP95 1085 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 HEY1Q9Y5J3 304 aa7.96□□□□□ -1.14
TRIM55-202ENST00000315962 ZSWIM8A7E2V4 1837 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 MGAMO43451 1857 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 EME2A4GXA9 379 aaPredicted RBP7.95□□□□□ -1.14
TRIM55-202ENST00000315962 BHMG1C9JSJ3 638 aaPredicted RBP7.95□□□□□ -1.14
TRIM55-202ENST00000315962 SGK1O00141 431 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 FSCN2O14926 492 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 DNAJC8O75937 253 aaPredicted RBP7.95□□□□□ -1.14
TRIM55-202ENST00000315962 B3GAT3O94766 335 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 ITGB1P05556 798 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 NQO1P15559 274 aaKnown RBP7.95□□□□□ -1.14
TRIM55-202ENST00000315962 GDF10P55107 478 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 BCAR1P56945 870 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 SESN3P58005 492 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 MGAT5Q09328 741 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 DCAF4L1Q3SXM0 396 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 LACTB2Q53H82 288 aaPredicted RBP7.95□□□□□ -1.14
TRIM55-202ENST00000315962 KIAA0319Q5VV43 1072 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 C1orf228Q6PIY5 440 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 ALKAL1Q6UXT8 129 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms