RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 GSTCDQ8NEC7 633 aa8.21□□□□□ -1.09
CNOT4-201ENST00000315544 SYT15Q9BQS2 421 aa8.21□□□□□ -1.09
CNOT4-201ENST00000315544 MAGEB5Q9BZ81 275 aa8.21□□□□□ -1.09
CNOT4-201ENST00000315544 DNAJB4Q9UDY4 337 aa8.21□□□□□ -1.09
CNOT4-201ENST00000315544 VPS28Q9UK41 221 aa8.21□□□□□ -1.09
CNOT4-201ENST00000315544 CORO1CQ9ULV4 474 aaPredicted RBP8.21□□□□□ -1.09
CNOT4-201ENST00000315544 K7ENM7 598 aa8.21□□□□□ -1.1
CNOT4-201ENST00000315544 AOC1P19801 751 aa8.21□□□□□ -1.1
CNOT4-201ENST00000315544 CRABP2P29373 138 aa8.21□□□□□ -1.1
CNOT4-201ENST00000315544 RFC1P35251 1148 aaPredicted RBP8.21□□□□□ -1.1
CNOT4-201ENST00000315544 YWHAZP63104 245 aaKnown RBP8.21□□□□□ -1.1
CNOT4-201ENST00000315544 PRKCEQ02156 737 aa8.21□□□□□ -1.1
CNOT4-201ENST00000315544 ARID5AQ03989 594 aa8.21□□□□□ -1.1
CNOT4-201ENST00000315544 ACAP1Q15027 740 aa8.21□□□□□ -1.1
CNOT4-201ENST00000315544 C2CD6Q53TS8 623 aa8.21□□□□□ -1.1
CNOT4-201ENST00000315544 RINLQ6ZS11 566 aa8.21□□□□□ -1.1
CNOT4-201ENST00000315544 OSBPL8Q9BZF1 889 aa8.21□□□□□ -1.1
CNOT4-201ENST00000315544 ABT1Q9ULW3 272 aaKnown RBP8.21□□□□□ -1.1
CNOT4-201ENST00000315544 L3MBTL1Q9Y468 752 aa8.21□□□□□ -1.1
CNOT4-201ENST00000315544 CCDC169A6NNP5 214 aa8.21□□□□□ -1.1
CNOT4-201ENST00000315544 FBXO21O94952 628 aa8.21□□□□□ -1.1
CNOT4-201ENST00000315544 HMGCRP04035 888 aa8.21□□□□□ -1.1
CNOT4-201ENST00000315544 ACADSP16219 412 aa8.21□□□□□ -1.1
CNOT4-201ENST00000315544 IGFBP6P24592 240 aaPredicted RBP8.21□□□□□ -1.1
CNOT4-201ENST00000315544 MFAP3P55082 362 aa8.21□□□□□ -1.1
CNOT4-201ENST00000315544 PEX3P56589 373 aa8.21□□□□□ -1.1
CNOT4-201ENST00000315544 DPYSQ14117 519 aa8.21□□□□□ -1.1
CNOT4-201ENST00000315544 LBRQ14739 615 aaKnown RBP8.21□□□□□ -1.1
CNOT4-201ENST00000315544 CRYMQ14894 314 aa8.21□□□□□ -1.1
CNOT4-201ENST00000315544 TFDP3Q5H9I0 405 aa8.21□□□□□ -1.1
CNOT4-201ENST00000315544 DSTYKQ6XUX3 929 aa8.21□□□□□ -1.1
CNOT4-201ENST00000315544 MCUQ8NE86 351 aa8.21□□□□□ -1.1
CNOT4-201ENST00000315544 ZNF483Q8TF39 744 aaPredicted RBP8.21□□□□□ -1.1
CNOT4-201ENST00000315544 ZNF75CPQ92670 426 aaPredicted RBP8.21□□□□□ -1.1
CNOT4-201ENST00000315544 ATG4CQ96DT6 458 aa8.21□□□□□ -1.1
CNOT4-201ENST00000315544 EPB41L1Q9H4G0 881 aa8.21□□□□□ -1.1
CNOT4-201ENST00000315544 PCDHGB4Q9UN71 923 aa8.21□□□□□ -1.1
CNOT4-201ENST00000315544 ARL2BPQ9Y2Y0 163 aa8.21□□□□□ -1.1
CNOT4-201ENST00000315544 PCDHGB5Q9Y5G0 923 aa8.21□□□□□ -1.1
CNOT4-201ENST00000315544 INPPL1O15357 1258 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 NR3C2P08235 984 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 GLDCP23378 1020 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 ARNTP27540 789 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 HOXC13P31276 330 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 HDAC4P56524 1084 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 RNASELQ05823 741 aaKnown RBP8.2□□□□□ -1.1
CNOT4-201ENST00000315544 PTPN11Q06124 597 aaPredicted RBP8.2□□□□□ -1.1
CNOT4-201ENST00000315544 ADCY1Q08828 1119 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 STAT4Q14765 748 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 DBN1Q16643 649 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 TDRD12Q587J7 1177 aaKnown RBP8.2□□□□□ -1.1
CNOT4-201ENST00000315544 ACSBG2Q5FVE4 666 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 MANEALQ5VSG8 457 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 FAM109BQ6ICB4 259 aaPredicted RBP8.2□□□□□ -1.1
CNOT4-201ENST00000315544 PELI3Q8N2H9 469 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 CHURC1Q8WUH1 139 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 TEKT4Q8WW24 435 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 NLRP4Q96MN2 994 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 NAP1L3Q99457 506 aaPredicted RBP8.2□□□□□ -1.1
CNOT4-201ENST00000315544 RNPEPL1Q9HAU8 725 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 NOTCH4Q99466 2003 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 MBLAC1A4D2B0 266 aaPredicted RBP8.2□□□□□ -1.1
CNOT4-201ENST00000315544 TCP11X1B4DZS4 312 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 CDH16O75309 829 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 OATP04181 439 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 VAV1P15498 845 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 POU3F3P20264 500 aaPredicted RBP8.2□□□□□ -1.1
CNOT4-201ENST00000315544 DPP6P42658 865 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 MSH2P43246 934 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 MAGEA4P43358 317 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 FCGRTP55899 365 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 PRKCZQ05513 592 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 NR1H3Q13133 447 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 PTK2BQ14289 1009 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 GPNMBQ14956 572 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 DPYSL2Q16555 572 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 KHDC1Q4VXA5 237 aaKnown RBP8.2□□□□□ -1.1
CNOT4-201ENST00000315544 RCOR2Q8IZ40 523 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 GPRC5AQ8NFJ5 357 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 RAB3IL1Q8TBN0 382 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 UHRF1Q96T88 793 aaPredicted RBP8.2□□□□□ -1.1
CNOT4-201ENST00000315544 TBC1D10AQ9BXI6 508 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 C12orf65Q9H3J6 166 aaKnown RBP8.2□□□□□ -1.1
CNOT4-201ENST00000315544 VEZTQ9HBM0 779 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 HOXC10Q9NYD6 342 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 KAT6AQ92794 2004 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 G3V2L1 256 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 H0Y858 1186 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 TNNT3P45378 269 aaPredicted RBP8.2□□□□□ -1.1
CNOT4-201ENST00000315544 EMC2Q15006 297 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 SLC10A6Q3KNW5 377 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 TTC30AQ86WT1 665 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 ZMAT2Q96NC0 199 aaKnown RBP8.2□□□□□ -1.1
CNOT4-201ENST00000315544 RABEP2Q9H5N1 569 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 RC3H2Q9HBD1 1191 aaKnown RBP8.2□□□□□ -1.1
CNOT4-201ENST00000315544 TLR9Q9NR96 1032 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 TAS2R1Q9NYW7 299 aa8.2□□□□□ -1.1
CNOT4-201ENST00000315544 TCRBV9S1A1TA0A576 114 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 MDM4O15151 490 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 PEX10O60683 326 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms